CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra026902.1-P	Field mustard	cytosol	98.31	92.11
CDY16092	Canola	cytosol	62.64	78.52
AT1G13470.1	Thale cress	cytosol	77.25	72.56
CDY26654	Canola	cytosol	71.91	67.37
CDY16094	Canola	cytosol	71.35	66.84
CDY21100	Canola	cytosol	69.94	64.51
CDY50165	Canola	cytosol	67.13	62.4
CDY21099	Canola	cytosol	66.57	61.72
CDY50167	Canola	cytosol	64.61	59.43
CDY30029	Canola	cytosol	62.64	58.53
CDY50164	Canola	cytosol	63.76	58.51
CDY21101	Canola	cytosol, mitochondrion	63.48	58.25
CDX98103	Canola	cytosol	60.39	58.11
CDY16093	Canola	cytosol	51.4	53.2
CDY16095	Canola	cytosol	53.65	48.6
CDY26655	Canola	cytosol	53.37	48.47
PGSC0003DMT400019462	Potato	cytosol	47.19	42.53
VIT_01s0011g02320.t01	Wine grape	cytosol	46.07	41.94
Solyc05g010460.2.1	Tomato	cytosol, nucleus, peroxisome	45.22	40.55
KRH71102	Soybean	cytosol	43.26	40.31
VIT_01s0011g02330.t01	Wine grape	cytosol, mitochondrion	44.1	39.75
PGSC0003DMT400019458	Potato	cytosol	37.64	39.65
KRH71091	Soybean	cytosol	43.82	39.39
Solyc05g010470.2.1	Tomato	cytosol	34.55	38.92
KRH63067	Soybean	cytosol, golgi, mitochondrion, nucleus	36.24	38.28
PGSC0003DMT400059315	Potato	cytosol	28.93	36.92
CDY48822	Canola	cytosol	20.79	35.24
GSMUA_Achr5P27360_001	Banana	mitochondrion	37.92	35.16
GSMUA_Achr3P06220_001	Banana	cytosol	37.08	34.46
GSMUA_Achr5P27350_001	Banana	mitochondrion	37.36	34.28
Os08t0413500-00	Rice	cytosol, plasma membrane	39.04	34.15
CDY15029	Canola	cytosol, mitochondrion	40.45	33.96
Zm00001d050302_P001	Maize	cytosol, plastid	35.39	33.6
Os08t0412700-01	Rice	cytosol, plasma membrane	35.39	33.33
Os08t0413200-00	Rice	cytosol	39.04	33.02
Os08t0413100-00	Rice	cytosol, plasma membrane	38.48	33.01
CDY47587	Canola	nucleus	16.85	32.79
GSMUA_Achr9P18410_001	Banana	cytosol	35.11	32.72
TraesCS4B01G190200.1	Wheat	cytosol	35.39	31.82
OQU80420	Sorghum	cytosol	33.15	31.81
TraesCS4A01G113900.1	Wheat	cytosol	34.55	31.38
TraesCS4D01G191600.1	Wheat	cytosol	34.27	31.04
Os08t0412800-01	Rice	plasma membrane	32.87	30.39
CDY26357	Canola	mitochondrion	39.89	30.15
TraesCS7D01G441700.1	Wheat	cytosol	38.48	30.04
EES09009	Sorghum	cytosol	36.24	29.12

Protein Annotations

EnsemblPlants:CDY26653	EnsemblPlantsGene:GSBRNA2T00035533001	InterPro:DUF1262	PANTHER:PTHR31050	PANTHER:PTHR31050:SF2	PFAM:PF06880
ProteinID:CDY26653	ProteinID:CDY26653.1	UniParc:UPI0004EDF200	UniProt:A0A078GPS9	MapMan:35.2	:

Description

BnaA09g46240DBnaA09g46240D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GPS9]

Coordinates

chrLK032192:-:504883..506195

Molecular Weight (calculated)

40812.3 Da

IEP (calculated)

6.764

GRAVY (calculated)

-0.552

Length

356 amino acids

Sequence
(BLAST)

001: MYVTRRLSEY QRNRSELKQP LPEGPNSGVL IIQDEESKPT CCFGSCYGSE LKGLPFPQNA KLTVNYIIAA NNTTIVYQDP VVFIPVLDQP LSSNRYYAIK
101: RSGKHSGEAS ANAKEEDRVP CCFCFTRVPE AKPQQADPYD IYQQFEIHQR KSLSRYYFAT SVAPDGVPPE FLKRKGWTVE YSTSEDYGLR DDAKGINAKL
201: RSELPSDLNI SVAVGNWYVP FIFVKDGDAK DQLKSSTYYR MTLYQKWEEV YSCENADKEN REVVLNMEVD PEVVKLEGQL IGKETIRVDE NGVVWFGVAN
301: KSVGLRSVVT ARMKWEEERF GWKSKAVSFV LRRMDESLVL TFEFKHADKL KSKWES

Best Arabidopsis Sequence Match ( AT1G13470.1 )
(BLAST)

001: MYVTRRLSEY QRNRSELPES PNSGVLIIQD EESRPTCCFG SCYRATLKGL PFPQNANLIV SESRIFLNQT ITYIDPVVFI PVLDQPLSSN RYYVIKRGGK
101: HSGKASANAK EEDRVPCCFC FSYVPEAKPQ EADPNDIYQQ FQIHQKRSSS RYYTATSVAP NGKPPEFLKR KYWNAEYSTS EDFGLKDDAK GIYTEIRSEL
201: PSDFNTSVVV GKWYVPFIFV KEGNAKDQLK SSAYYSMILL QRWEEVYSCE NAYNENREVV VDVEVEPEVV KLEGQEIGKN TKRVDENGVF WFAVAEKRIG
301: LRSVVMERMK WEEERFGWKI EPQRAVVKKS ERFNGGGSNW KSYRCYVLVE SFELRRKDKS LVLTFEFKHV DKLRTKWES

Arabidopsis Description

Protein of unknown function (DUF1262) [Source:TAIR;Acc:AT1G13470]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.