Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 2
- mitochondrion 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY21101 | Canola | cytosol, mitochondrion | 97.16 | 97.16 |
| Bra016727.1-P | Field mustard | cytosol | 95.36 | 95.36 |
| AT1G13540.1 | Thale cress | cytosol | 77.32 | 78.74 |
| AT1G13510.1 | Thale cress | cytosol | 73.71 | 75.26 |
| CDY26653 | Canola | cytosol | 58.51 | 63.76 |
| CDY16094 | Canola | cytosol | 62.11 | 63.42 |
| CDY26654 | Canola | cytosol | 61.6 | 62.89 |
| CDY21100 | Canola | cytosol | 61.34 | 61.66 |
| CDY16092 | Canola | cytosol | 44.33 | 60.56 |
| CDY21099 | Canola | cytosol | 59.02 | 59.64 |
| CDY50165 | Canola | cytosol | 58.51 | 59.27 |
| CDY50167 | Canola | cytosol | 58.25 | 58.4 |
| CDY30029 | Canola | cytosol | 56.19 | 57.22 |
| CDX98103 | Canola | cytosol | 54.38 | 57.03 |
| CDY16095 | Canola | cytosol | 52.32 | 51.65 |
| CDY26655 | Canola | cytosol | 51.8 | 51.28 |
| CDY16093 | Canola | cytosol | 40.21 | 45.35 |
| PGSC0003DMT400019462 | Potato | cytosol | 45.62 | 44.81 |
| Solyc05g010470.2.1 | Tomato | cytosol | 36.08 | 44.3 |
| VIT_01s0011g02320.t01 | Wine grape | cytosol | 44.07 | 43.73 |
| Solyc05g010460.2.1 | Tomato | cytosol, nucleus, peroxisome | 44.59 | 43.58 |
| PGSC0003DMT400019458 | Potato | cytosol | 37.63 | 43.2 |
| KRH71102 | Soybean | cytosol | 42.27 | 42.93 |
| KRH71091 | Soybean | cytosol | 42.01 | 41.16 |
| VIT_01s0011g02330.t01 | Wine grape | cytosol, mitochondrion | 41.75 | 41.01 |
| KRH63067 | Soybean | cytosol, golgi, mitochondrion, nucleus | 35.57 | 40.95 |
| PGSC0003DMT400059315 | Potato | cytosol | 29.12 | 40.5 |
| GSMUA_Achr5P27360_001 | Banana | mitochondrion | 38.4 | 38.8 |
| GSMUA_Achr5P27350_001 | Banana | mitochondrion | 37.63 | 37.63 |
| GSMUA_Achr3P06220_001 | Banana | cytosol | 37.11 | 37.6 |
| CDY15029 | Canola | cytosol, mitochondrion | 38.66 | 35.38 |
| GSMUA_Achr9P18410_001 | Banana | cytosol | 34.54 | 35.08 |
| CDY48822 | Canola | cytosol | 18.81 | 34.76 |
| Os08t0413200-00 | Rice | cytosol | 37.11 | 34.2 |
| CDY47587 | Canola | nucleus | 15.98 | 33.88 |
| Os08t0412700-01 | Rice | cytosol, plasma membrane | 32.99 | 33.86 |
| Os08t0413100-00 | Rice | cytosol, plasma membrane | 35.31 | 33.01 |
| Zm00001d050302_P001 | Maize | cytosol, plastid | 31.44 | 32.53 |
| TraesCS7D01G441700.1 | Wheat | cytosol | 37.89 | 32.24 |
| OQU80420 | Sorghum | cytosol | 30.67 | 32.08 |
| Os08t0412800-01 | Rice | plasma membrane | 31.7 | 31.95 |
| Os08t0413500-00 | Rice | cytosol, plasma membrane | 33.51 | 31.94 |
| CDY26357 | Canola | mitochondrion | 38.14 | 31.42 |
| TraesCS4B01G190200.1 | Wheat | cytosol | 31.44 | 30.81 |
| EES09009 | Sorghum | cytosol | 35.05 | 30.7 |
| TraesCS4D01G191600.1 | Wheat | cytosol | 30.93 | 30.53 |
| TraesCS4A01G113900.1 | Wheat | cytosol | 30.67 | 30.36 |
Protein Annotations
| EnsemblPlants:CDY50164 | EnsemblPlantsGene:GSBRNA2T00096081001 | InterPro:DUF1262 | PANTHER:PTHR31050 | PANTHER:PTHR31050:SF2 | PFAM:PF06880 |
| ProteinID:CDY50164 | ProteinID:CDY50164.1 | SEG:seg | UniParc:UPI0004EDD21F | UniProt:A0A078ILE7 | MapMan:35.2 |
Description
BnaC08g15950DBnaC08g15950D protein [Source:UniProtKB/TrEMBL;Acc:A0A078ILE7]
Coordinates
chrLK032886:+:13627..14866
Molecular Weight (calculated)
44604.8 Da
IEP (calculated)
7.495
GRAVY (calculated)
-0.600
Length
388 amino acids
Sequence
(BLAST)
(BLAST)
001: MYITRRLSEY RRNPSELTQP PPEGPSSGVL VIHDQHSQIQ STCCFGSCEV VEGNHSGLPL TQNLKLAVLF NSGGDDSTND PIVFIPVLDK PLSSNCYYAI
101: RRRGKHSGEA STSAKEKDIV SCCLCLTQVP EAKPKQLDPY DTYQQFEIHQ KKPSSRYYHA TSVAPDGVPP WFLKKKEWTV SYSRSQEFEL RDDAKGLNKE
201: LRSELPALGA SVVVGKWYVP FIFVKERDAK DQIKRSVYYS LTLEQRWEEV FSHENDKSEN RDVVVDVEVE DEVVKLGGQE ITRGVNENGF VWFGVGDRKI
301: GLRSVVVERM KWEEERFGWR SKGEQERAMV VKRLEEKPKD GSFWKSYHCY VLIESFVLKR MDESLVLTYE FRHVDKVKSK WSKLIGAT
101: RRRGKHSGEA STSAKEKDIV SCCLCLTQVP EAKPKQLDPY DTYQQFEIHQ KKPSSRYYHA TSVAPDGVPP WFLKKKEWTV SYSRSQEFEL RDDAKGLNKE
201: LRSELPALGA SVVVGKWYVP FIFVKERDAK DQIKRSVYYS LTLEQRWEEV FSHENDKSEN RDVVVDVEVE DEVVKLGGQE ITRGVNENGF VWFGVGDRKI
301: GLRSVVVERM KWEEERFGWR SKGEQERAMV VKRLEEKPKD GSFWKSYHCY VLIESFVLKR MDESLVLTYE FRHVDKVKSK WSKLIGAT
001: MYITRSFSEY RRNPAELTQP PPEGPNSGIL VIQDQHSRTR ATSCFGSWLV VDSSLSGLPL PQNLKLAVTF NIGGDDSTRD PVVFIPVLDK PLSSNCYYAI
101: KRHGKHSGEA SGSAKEDDIV SCCFCSSFVP EAKPKQLDPF DMYQQFKIHQ KEPSSRCYYA TSVAPDGVPP WFLRKKEWTV EYSRFQDFEL RDDAKGLITE
201: LRTELPLLGM STVVGKWYVP FIFVKEREVK DQIKNSMYYS MTLEQRWKEL FSDENDKSEN RDVVVDVEVE TEVVKLEGQM IERGLEANGF VWFGVGDKKI
301: GLGSVVVERM KWEEERFGWT GKGDNERSMT VKRLEKSTDG SLWKHYHCYV LIESFVLKRM DESLVLTYEF THVDKLKTKW D
101: KRHGKHSGEA SGSAKEDDIV SCCFCSSFVP EAKPKQLDPF DMYQQFKIHQ KEPSSRCYYA TSVAPDGVPP WFLRKKEWTV EYSRFQDFEL RDDAKGLITE
201: LRTELPLLGM STVVGKWYVP FIFVKEREVK DQIKNSMYYS MTLEQRWKEL FSDENDKSEN RDVVVDVEVE TEVVKLEGQM IERGLEANGF VWFGVGDKKI
301: GLGSVVVERM KWEEERFGWT GKGDNERSMT VKRLEKSTDG SLWKHYHCYV LIESFVLKRM DESLVLTYEF THVDKLKTKW D
Arabidopsis Description
At1g13540 [Source:UniProtKB/TrEMBL;Acc:Q6NM24]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.