Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 9
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU75930 | Sorghum | plastid | 60.89 | 55.16 |
| OQU75612 | Sorghum | plastid | 60.89 | 55.16 |
| TraesCS7B01G083300.1 | Wheat | cytosol | 35.15 | 53.38 |
| TraesCS7D01G178900.1 | Wheat | cytosol | 29.7 | 49.18 |
| KXG19616 | Sorghum | plastid | 58.91 | 44.24 |
| TraesCS7A01G232500.1 | Wheat | plastid | 44.06 | 43.2 |
| TraesCS7D01G232600.1 | Wheat | plastid | 44.55 | 43.06 |
| TraesCS7B01G082900.1 | Wheat | plastid | 42.08 | 42.5 |
| EER89431 | Sorghum | plastid | 45.05 | 41.94 |
| TraesCS7D01G179400.1 | Wheat | plastid | 43.56 | 41.9 |
| TraesCS7A01G236700.1 | Wheat | plastid | 43.56 | 41.51 |
| TraesCS7D01G179300.1 | Wheat | plastid | 43.56 | 41.51 |
| TraesCS7B01G083100.1 | Wheat | plastid | 43.56 | 41.31 |
| TraesCS7D01G179000.1 | Wheat | plastid | 43.07 | 40.85 |
| HORVU7Hr1G036500.7 | Barley | plastid | 41.09 | 40.69 |
| TraesCS7D01G179100.1 | Wheat | plastid | 43.07 | 40.47 |
| TraesCS7B01G083200.2 | Wheat | plastid | 43.56 | 39.82 |
| TraesCS7D01G179500.1 | Wheat | plastid | 42.08 | 39.53 |
| TraesCS7B01G083500.1 | Wheat | mitochondrion | 45.54 | 39.48 |
| TraesCS7B01G083400.1 | Wheat | plastid | 41.58 | 39.44 |
| OQU85385 | Sorghum | mitochondrion | 43.07 | 39.37 |
| TraesCS7A01G177700.1 | Wheat | cytosol, plastid | 42.08 | 39.35 |
| TraesCS7A01G177500.1 | Wheat | cytosol, plastid | 42.08 | 39.35 |
| TraesCS7D01G179200.1 | Wheat | cytosol, plastid | 40.59 | 39.23 |
| EER89430 | Sorghum | plastid | 44.06 | 39.21 |
| TraesCS7A01G177600.1 | Wheat | plastid | 41.09 | 38.6 |
| TraesCS7D01G179600.1 | Wheat | mitochondrion | 44.06 | 38.03 |
| HORVU7Hr1G036570.2 | Barley | cytosol | 40.59 | 37.1 |
| TraesCS7B01G130900.1 | Wheat | plastid | 29.7 | 37.04 |
| KRH39841 | Soybean | mitochondrion | 26.73 | 36.73 |
| TraesCS2B01G531300.1 | Wheat | plastid | 31.19 | 35.8 |
| HORVU7Hr1G036470.3 | Barley | cytosol, nucleus | 42.57 | 35.54 |
| GSMUA_Achr10P... | Banana | mitochondrion | 37.62 | 35.19 |
| HORVU7Hr1G036540.3 | Barley | mitochondrion, nucleus, plastid | 44.55 | 34.88 |
| KRH23958 | Soybean | mitochondrion | 35.64 | 33.96 |
| CDY00476 | Canola | mitochondrion | 26.24 | 32.92 |
| CDY38862 | Canola | mitochondrion | 31.68 | 32.65 |
| Bra029174.1-P | Field mustard | mitochondrion | 31.68 | 32.49 |
| Bra028253.1-P | Field mustard | mitochondrion | 25.74 | 32.3 |
| Solyc08g078700.2.1 | Tomato | plastid | 33.17 | 31.9 |
| CDX99920 | Canola | mitochondrion | 25.25 | 31.88 |
| VIT_02s0154g00480.t01 | Wine grape | mitochondrion, plastid | 31.68 | 31.84 |
| VIT_16s0022g00510.t01 | Wine grape | mitochondrion | 32.67 | 31.73 |
| AT4G25200.1 | Thale cress | mitochondrion | 32.67 | 31.43 |
| VIT_02s0154g00490.t01 | Wine grape | mitochondrion | 31.19 | 31.34 |
| PGSC0003DMT400012249 | Potato | mitochondrion | 32.67 | 31.28 |
| CDY32630 | Canola | mitochondrion | 26.24 | 31.18 |
| AT5G51440.1 | Thale cress | mitochondrion | 32.18 | 30.95 |
| Bra013872.1-P | Field mustard | mitochondrion | 32.18 | 30.52 |
| TraesCS7A01G177800.1 | Wheat | nucleus | 34.65 | 30.43 |
| CDY03368 | Canola | mitochondrion | 31.68 | 30.05 |
| CDX89437 | Canola | mitochondrion | 31.68 | 30.05 |
| Os06t0219500-00 | Rice | mitochondrion | 39.6 | 25.89 |
| TraesCS5B01G123900.1 | Wheat | plastid | 26.24 | 22.18 |
| Solyc08g078710.1.1 | Tomato | mitochondrion | 20.3 | 20.92 |
| PGSC0003DMT400012247 | Potato | mitochondrion | 19.8 | 20.51 |
| Solyc08g078720.2.1 | Tomato | mitochondrion | 15.35 | 18.45 |
| PGSC0003DMT400012246 | Potato | plastid | 15.35 | 18.24 |
Protein Annotations
| EnsemblPlants:OQU76071 | EnsemblPlantsGene:SORBI_3010G087700 | EntrezGene:8065484 | Gene3D:2.60.40.790 | InterPro:A-crystallin/Hsp20_dom | InterPro:HSP20 |
| InterPro:HSP20-like_chaperone | InterPro:IPR002068 | InterPro:IPR008978 | PANTHER:PTHR11527 | PANTHER:PTHR11527:SF176 | PFAM:PF00011 |
| PFscan:PS01031 | ProteinID:OQU76071 | ProteinID:OQU76071.1 | RefSeq:XP_002438065.1 | SEG:seg | SUPFAM:SSF49764 |
| UniParc:UPI0001A89845 | UniProt:A0A1W0VS26 | MapMan:35.1 | : | : | : |
Description
hypothetical protein
Coordinates
chr10:-:7515897..7517005
Molecular Weight (calculated)
21488.6 Da
IEP (calculated)
5.395
GRAVY (calculated)
-0.316
Length
202 amino acids
Sequence
(BLAST)
(BLAST)
001: MASAVASQVA VPKPVFLMDI LASPSASGNT VASDRHLFSN GEAPPRSSSD GVKESTGEDA AAADRTRGLD LFPEAAMRDL LLALAEDGGG AAPLTGFSPG
101: GWWISKEDAD AVQLKVAMPG LAKEHVKMRA EKNNLVIKGE GDKDSEGDDK KAPARYIYRI GLPSHAFKID QIKAEMKNGV LMVTVPKIKD GERKDVFEIK
201: VE
101: GWWISKEDAD AVQLKVAMPG LAKEHVKMRA EKNNLVIKGE GDKDSEGDDK KAPARYIYRI GLPSHAFKID QIKAEMKNGV LMVTVPKIKD GERKDVFEIK
201: VE
001: MASALALKRL LSSSIAPRSR SVLRPAVSSR LFNTNAVRSY DDDGENGDGV DLYRRSVPRR RGDFFSDVFD PFSPTRSVSQ VLNLMDQFME NPLLSATRGM
101: GASGARRGWD IKEKDDALYL RIDMPGLSRE DVKLALEQDT LVIRGEGKNE EDGGEEGESG NRRFTSRIGL PDKIYKIDEI KAEMKNGVLK VVIPKMKEQE
201: RNDVRQIEIN
101: GASGARRGWD IKEKDDALYL RIDMPGLSRE DVKLALEQDT LVIRGEGKNE EDGGEEGESG NRRFTSRIGL PDKIYKIDEI KAEMKNGVLK VVIPKMKEQE
201: RNDVRQIEIN
Arabidopsis Description
HSP23.6HSP23.6-MITO [Source:UniProtKB/TrEMBL;Acc:A0A178USN5]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.