Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 6
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G179600.1 | Wheat | mitochondrion | 94.42 | 94.02 |
| TraesCS7B01G083300.1 | Wheat | cytosol | 41.2 | 72.18 |
| TraesCS7B01G083100.1 | Wheat | plastid | 59.23 | 64.79 |
| TraesCS7B01G083400.1 | Wheat | plastid | 58.37 | 63.85 |
| TraesCS7B01G130900.1 | Wheat | plastid | 44.21 | 63.58 |
| TraesCS7B01G082900.1 | Wheat | plastid | 53.22 | 62.0 |
| TraesCS7B01G083200.2 | Wheat | plastid | 58.37 | 61.54 |
| TraesCS6B01G346700.1 | Wheat | mitochondrion | 46.78 | 50.7 |
| TraesCS2B01G531300.1 | Wheat | plastid | 35.19 | 46.59 |
| OQU76071 | Sorghum | plastid | 39.48 | 45.54 |
| OQU75612 | Sorghum | plastid | 42.49 | 44.39 |
| OQU75930 | Sorghum | plastid | 42.49 | 44.39 |
| EER89430 | Sorghum | plastid | 42.92 | 44.05 |
| Solyc08g078700.2.1 | Tomato | plastid | 39.48 | 43.81 |
| Zm00001d044874_P001 | Maize | cytosol, plastid | 39.06 | 43.75 |
| PGSC0003DMT400012249 | Potato | mitochondrion | 39.48 | 43.6 |
| GSMUA_Achr10P... | Banana | mitochondrion | 40.34 | 43.52 |
| KRH23958 | Soybean | mitochondrion | 37.77 | 41.51 |
| KRH39841 | Soybean | mitochondrion | 26.18 | 41.5 |
| VIT_02s0154g00480.t01 | Wine grape | mitochondrion, plastid | 35.62 | 41.29 |
| VIT_02s0154g00490.t01 | Wine grape | mitochondrion | 34.76 | 40.3 |
| EER89431 | Sorghum | plastid | 37.34 | 40.09 |
| VIT_16s0022g00510.t01 | Wine grape | mitochondrion | 35.19 | 39.42 |
| Bra013872.1-P | Field mustard | mitochondrion | 34.76 | 38.03 |
| CDX89437 | Canola | mitochondrion | 34.76 | 38.03 |
| CDY00476 | Canola | mitochondrion | 26.18 | 37.89 |
| CDY03368 | Canola | mitochondrion | 34.33 | 37.56 |
| AT4G25200.1 | Thale cress | mitochondrion | 33.48 | 37.14 |
| CDX99920 | Canola | mitochondrion | 24.89 | 36.25 |
| CDY32630 | Canola | mitochondrion | 26.18 | 35.88 |
| CDY38862 | Canola | mitochondrion | 30.04 | 35.71 |
| TraesCS5B01G123900.1 | Wheat | plastid | 36.48 | 35.56 |
| Bra029174.1-P | Field mustard | mitochondrion | 30.04 | 35.53 |
| Bra028253.1-P | Field mustard | mitochondrion | 24.46 | 35.4 |
| AT5G51440.1 | Thale cress | mitochondrion | 31.76 | 35.24 |
| KXG19616 | Sorghum | plastid | 39.48 | 34.2 |
| Os06t0219500-00 | Rice | mitochondrion | 42.49 | 32.04 |
| Solyc08g078710.1.1 | Tomato | mitochondrion | 20.17 | 23.98 |
| Solyc08g078720.2.1 | Tomato | mitochondrion | 17.17 | 23.81 |
| PGSC0003DMT400012247 | Potato | mitochondrion | 19.74 | 23.59 |
| PGSC0003DMT400012246 | Potato | plastid | 16.74 | 22.94 |
Protein Annotations
| EnsemblPlants:TraesCS7B01G083500.1 | EnsemblPlantsGene:TraesCS7B01G083500 | Gene3D:2.60.40.790 | InterPro:A-crystallin/Hsp20_dom | InterPro:HSP20 | InterPro:HSP20-like_chaperone |
| InterPro:IPR002068 | InterPro:IPR008978 | PANTHER:PTHR11527 | PANTHER:PTHR11527:SF176 | PFAM:PF00011 | PFscan:PS01031 |
| SEG:seg | SUPFAM:SSF49764 | TIGR:cd06464 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chr7B:+:94263847..94264657
Molecular Weight (calculated)
25440.9 Da
IEP (calculated)
5.514
GRAVY (calculated)
-0.585
Length
233 amino acids
Sequence
(BLAST)
(BLAST)
001: MASAVARRGA ALPSLLEKLL AKPSKSGAPV SFALRPAAVT AARRPYNTLG KEGRLYDDED DDSSSGESGS EYEDTDSDDR RRARDFFVPG FSQDVLDQFG
101: AHTSFGRLLS ALEEAAAPTG LSSTAGASRL GRWVSKVDDD AVYLKVPMPG LGKEHVKVWA EPNGLVIKGE GDKEPWDGDD DSAVPRYSRR IKVPADAFKM
201: DKIKAEMKNG VLRVTVPRLK EEERKDVFQV KIE
101: AHTSFGRLLS ALEEAAAPTG LSSTAGASRL GRWVSKVDDD AVYLKVPMPG LGKEHVKVWA EPNGLVIKGE GDKEPWDGDD DSAVPRYSRR IKVPADAFKM
201: DKIKAEMKNG VLRVTVPRLK EEERKDVFQV KIE
001: MASALALKRL LSSSIAPRSR SVLRPAVSSR LFNTNAVRSY DDDGENGDGV DLYRRSVPRR RGDFFSDVFD PFSPTRSVSQ VLNLMDQFME NPLLSATRGM
101: GASGARRGWD IKEKDDALYL RIDMPGLSRE DVKLALEQDT LVIRGEGKNE EDGGEEGESG NRRFTSRIGL PDKIYKIDEI KAEMKNGVLK VVIPKMKEQE
201: RNDVRQIEIN
101: GASGARRGWD IKEKDDALYL RIDMPGLSRE DVKLALEQDT LVIRGEGKNE EDGGEEGESG NRRFTSRIGL PDKIYKIDEI KAEMKNGVLK VVIPKMKEQE
201: RNDVRQIEIN
Arabidopsis Description
HSP23.6HSP23.6-MITO [Source:UniProtKB/TrEMBL;Acc:A0A178USN5]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.