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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 3
  • mitochondrion 7
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400012247 Potato mitochondrion 87.76 88.21
Solyc08g078700.2.1 Tomato plastid 28.57 26.67
TraesCS7D01G178900.1 Wheat cytosol 16.33 26.23
Solyc08g078720.2.1 Tomato mitochondrion 22.45 26.19
TraesCS6B01G346700.1 Wheat mitochondrion 26.53 24.19
TraesCS7B01G083300.1 Wheat cytosol 16.33 24.06
Zm00001d052194_P001 Maize mitochondrion 26.53 23.85
TraesCS6A01G316200.1 Wheat mitochondrion 26.02 23.72
GSMUA_Achr10P... Banana mitochondrion 26.02 23.61
Os02t0758000-01 Rice plastid 26.02 23.18
TraesCS6D01G295500.1 Wheat mitochondrion 25.51 23.15
OQU85385 Sorghum mitochondrion 26.02 23.08
HORVU7Hr1G036500.7 Barley plastid 22.45 21.57
TraesCS7D01G179500.1 Wheat plastid 23.47 21.4
TraesCS7A01G177500.1 Wheat cytosol, plastid 23.47 21.3
TraesCS7A01G177700.1 Wheat cytosol, plastid 23.47 21.3
TraesCS7D01G179000.1 Wheat plastid 22.96 21.13
TraesCS7D01G179200.1 Wheat cytosol, plastid 22.45 21.05
TraesCS7B01G082900.1 Wheat plastid 21.43 21.0
TraesCS7D01G179400.1 Wheat plastid 22.45 20.95
TraesCS7D01G179100.1 Wheat plastid 22.96 20.93
TraesCS7A01G236700.1 Wheat plastid 22.45 20.75
TraesCS7B01G083100.1 Wheat plastid 22.45 20.66
TraesCS7D01G179600.1 Wheat mitochondrion 24.49 20.51
TraesCS7A01G177600.1 Wheat plastid 22.45 20.47
OQU76071 Sorghum plastid 20.92 20.3
TraesCS7D01G179300.1 Wheat plastid 21.94 20.28
TraesCS7B01G083500.1 Wheat mitochondrion 23.98 20.17
TraesCS7D01G232600.1 Wheat plastid 21.43 20.1
TraesCS7B01G083200.2 Wheat plastid 22.45 19.91
TraesCS7B01G083400.1 Wheat plastid 21.43 19.72
HORVU7Hr1G036570.2 Barley cytosol 21.94 19.46
EER89431 Sorghum plastid 21.43 19.35
TraesCS7A01G232500.1 Wheat plastid 19.9 18.93
OQU75612 Sorghum plastid 21.43 18.83
OQU75930 Sorghum plastid 21.43 18.83
Zm00001d044874_P001 Maize cytosol, plastid 19.9 18.75
TraesCS2B01G531300.1 Wheat plastid 16.84 18.75
HORVU7Hr1G036470.3 Barley cytosol, nucleus 21.94 17.77
HORVU6Hr1G077710.3 Barley cytosol 23.98 17.22
HORVU7Hr1G036540.3 Barley mitochondrion, nucleus, plastid 22.45 17.05
EER89430 Sorghum plastid 19.39 16.74
TraesCS7B01G130900.1 Wheat plastid 13.78 16.67
TraesCS7A01G177800.1 Wheat nucleus 18.37 15.65
Os06t0219500-00 Rice mitochondrion 22.45 14.24
KXG19616 Sorghum plastid 18.88 13.75
TraesCS5B01G123900.1 Wheat plastid 12.76 10.46
Protein Annotations
EnsemblPlants:Solyc08g078710.1.1EnsemblPlantsGene:Solyc08g078710.1Gene3D:2.60.40.790InterPro:A-crystallin/Hsp20_domInterPro:HSP20InterPro:HSP20-like_chaperone
InterPro:IPR002068InterPro:IPR008978PANTHER:PTHR11527PANTHER:PTHR11527:SF95PFAM:PF00011PFscan:PS01031
SUPFAM:SSF49764UniParc:UPI000276ACE5UniProt:K4CNN0MapMan:35.1::
Description
No Description!
Coordinates
chr8:+:62472773..62473878
Molecular Weight (calculated)
21541.8 Da
IEP (calculated)
8.430
GRAVY (calculated)
-0.301
Length
196 amino acids
Sequence
(BLAST)
001: MAFRTALRRI SSSSILFYNL LNNAPSSRGL TGSLAPLTSR FLSYVGSVSV TDSNEESFII NACGGSFARF EQFPIHRGAC DAYMMNPFQI SGPGGAYEAK
101: NIEEGMHVRM EMPGIDKEDV KVLISYGTII IKGEGKKEST YEDSGRTYSA NIEICSNSYE AQSMEANMKN GVLRMLIPKS KTPQKVTGSN YEIKVK
Best Arabidopsis Sequence Match ( AT5G51440.1 )
(BLAST)
001: MASSSALALR RLLSSSTVAV PRALRAVRPV AASSRLFNTN AARNYEDGVD RNHHSNRHVS RHGGDFFSHI LDPFTPTRSL SQMLNFMDQV SEIPLVSATR
101: GMGASGVRRG WNVKEKDDAL HLRIDMPGLS REDVKLALEQ NTLVIRGEGE TEEGEDVSGD GRRFTSRIEL PEKVYKTDEI KAEMKNGVLK VVIPKIKEDE
201: RNNIRHINVD
Arabidopsis Description
HSP23.523.5 kDa heat shock protein, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9FGM9]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.