Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 3
- endoplasmic reticulum 1
- mitochondrion 6
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| GSMUA_Achr10P... | |
| GSMUA_Achr10P... | |
| GSMUA_Achr11P... | |
| GSMUA_Achr11P... | |
| GSMUA_Achr1P03070_001 | |
| GSMUA_Achr1P11590_001 | |
| GSMUA_Achr1P13560_001 | |
| GSMUA_Achr2P06170_001 | |
| GSMUA_Achr2P09490_001 | |
| GSMUA_Achr3P12880_001 | |
| GSMUA_Achr3P23440_001 | |
| GSMUA_Achr3P23450_001 | |
| GSMUA_Achr3P23470_001 | |
| GSMUA_Achr3P28160_001 | |
| GSMUA_Achr3P31830_001 | |
| GSMUA_Achr4P00070_001 | |
| GSMUA_Achr4P04340_001 | |
| GSMUA_Achr4P15500_001 | |
| GSMUA_Achr4P20870_001 | |
| GSMUA_Achr4P22090_001 | |
| GSMUA_Achr4P23940_001 | |
| GSMUA_Achr4P30000_001 | |
| GSMUA_Achr5P05550_001 | |
| GSMUA_Achr5P14740_001 | |
| GSMUA_Achr5P20630_001 | |
| GSMUA_Achr5P28120_001 | |
| GSMUA_Achr6P26140_001 | |
| GSMUA_Achr7P01890_001 | |
| GSMUA_Achr7P21150_001 | |
| GSMUA_Achr7P24930_001 | |
| GSMUA_Achr7P24940_001 | |
| GSMUA_Achr8P11400_001 | |
| GSMUA_Achr8P18180_001 | |
| GSMUA_Achr9P01060_001 | |
| GSMUA_Achr9P01070_001 | |
| GSMUA_Achr9P05750_001 | |
| GSMUA_Achr9P05760_001 | |
| GSMUA_Achr9P22660_001 | |
| GSMUA_Achr9P24750_001 | |
| GSMUA_Achr9P28520_001 | |
| GSMUA_AchrUn_... | |
| GSMUA_AchrUn_... | |
| GSMUA_AchrUn_... | |
| GSMUA_AchrUn_... | |
| GSMUA_AchrUn_... | |
| GSMUA_AchrUn_... |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G25200.1 | GSMUA_Achr3P12880_001 | AT1G19010.1 | 21798944 |
| AT4G25200.1 | GSMUA_Achr3P28160_001 | AT1G19010.1 | 21798944 |
| AT4G25200.1 | GSMUA_Achr9P22660_001 | AT1G19010.1 | 21798944 |
| AT4G25200.1 | GSMUA_Achr1P13560_001 | AT1G26460.1 | 21798944 |
| AT4G25200.1 | GSMUA_Achr2P06170_001 | AT1G26460.1 | 21798944 |
| AT4G25200.1 | GSMUA_Achr3P23440_001 | AT1G30730.1 | 21798944 |
| AT4G25200.1 | GSMUA_Achr3P23450_001 | AT1G30730.1 | 21798944 |
| AT4G25200.1 | GSMUA_Achr3P23470_001 | AT1G30730.1 | 21798944 |
| AT4G25200.1 | GSMUA_Achr9P28520_001 | AT1G52560.1 | 21798944 |
| AT4G25200.1 | GSMUA_Achr11P... | AT1G63470.1 | 21798944 |
| AT4G25200.1 | GSMUA_Achr11P... | AT1G63470.1 | 21798944 |
| AT4G25200.1 | GSMUA_Achr1P03070_001 | AT1G63470.1 | 21798944 |
| AT4G25200.1 | GSMUA_Achr4P30000_001 | AT1G63470.1 | 21798944 |
| AT4G25200.1 | GSMUA_Achr5P20630_001 | AT1G63470.1 | 21798944 |
| AT4G25200.1 | GSMUA_Achr8P11400_001 | AT1G63470.1 | 21798944 |
| AT4G25200.1 | GSMUA_Achr1P11590_001 | AT2G34340.1 | 21798944 |
| AT4G25200.1 | GSMUA_Achr2P09490_001 | AT2G34340.1 | 21798944 |
| AT4G25200.1 | GSMUA_Achr3P31830_001 | AT2G34340.1 | 21798944 |
| AT4G25200.1 | GSMUA_Achr4P15500_001 | AT2G34340.1 | 21798944 |
| AT4G25200.1 | GSMUA_Achr6P26140_001 | AT2G34340.1 | 21798944 |
| AT4G25200.1 | GSMUA_Achr7P24930_001 | AT2G34340.1 | 21798944 |
| AT4G25200.1 | GSMUA_Achr7P24940_001 | AT2G34340.1 | 21798944 |
| AT4G25200.1 | GSMUA_Achr9P05750_001 | AT2G34340.1 | 21798944 |
| AT4G25200.1 | GSMUA_Achr9P05760_001 | AT2G34340.1 | 21798944 |
| AT4G25200.1 | GSMUA_AchrUn_... | AT2G34340.1 | 21798944 |
| AT4G25200.1 | GSMUA_AchrUn_... | AT2G41700.1 | 21798944 |
| AT4G25200.1 | GSMUA_Achr7P21150_001 | AT2G41720.1 | 21798944 |
| AT4G25200.1 | GSMUA_Achr10P... | AT3G10970.1 | 21798944 |
| AT4G25200.1 | GSMUA_Achr4P04340_001 | AT3G54826.1 | 21798944 |
| AT4G25200.1 | GSMUA_AchrUn_... | AT3G56290.1 | 21798944 |
| AT4G25200.1 | GSMUA_Achr4P23940_001 | AT4G05180.1 | 21798944 |
| AT4G25200.1 | GSMUA_Achr9P24750_001 | AT4G05180.1 | 21798944 |
| AT4G25200.1 | GSMUA_Achr10P... | AT4G25200.1 | 21798944 |
| AT4G25200.1 | GSMUA_AchrUn_... | AT4G32190.1 | 21798944 |
| AT4G25200.1 | GSMUA_Achr4P20870_001 | AT4G37890.1 | 21798944 |
| AT4G25200.1 | GSMUA_Achr4P22090_001 | AT4G37890.1 | 21798944 |
| AT4G25200.1 | GSMUA_Achr5P14740_001 | AT4G37890.1 | 21798944 |
| AT4G25200.1 | GSMUA_Achr7P01890_001 | AT4G37890.1 | 21798944 |
| AT4G25200.1 | GSMUA_Achr8P18180_001 | AT5G09320.1 | 21798944 |
| AT4G25200.1 | GSMUA_AchrUn_... | AT5G10710.1 | 21798944 |
| AT4G25200.1 | GSMUA_AchrUn_... | AT5G10710.1 | 21798944 |
| AT4G25200.1 | GSMUA_Achr4P00070_001 | AT5G13260.1 | 21798944 |
| AT4G25200.1 | GSMUA_Achr9P01060_001 | AT5G13260.1 | 21798944 |
| AT4G25200.1 | GSMUA_Achr9P01070_001 | AT5G13260.1 | 21798944 |
| AT4G25200.1 | GSMUA_Achr10P... | AT5G51440.1 | 21798944 |
| AT4G25200.1 | GSMUA_Achr5P28120_001 | AT5G58575.1 | 21798944 |
| AT4G25200.1 | GSMUA_Achr5P05550_001 | AT5G64350.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH23958 | Soybean | mitochondrion | 52.78 | 53.77 |
| Os02t0758000-01 | Rice | plastid | 53.7 | 52.73 |
| OQU85385 | Sorghum | mitochondrion | 53.24 | 52.04 |
| VIT_02s0154g00480.t01 | Wine grape | mitochondrion, plastid | 48.15 | 51.74 |
| TraesCS7D01G178900.1 | Wheat | cytosol | 29.17 | 51.64 |
| Solyc08g078700.2.1 | Tomato | plastid | 49.54 | 50.95 |
| PGSC0003DMT400012249 | Potato | mitochondrion | 49.54 | 50.71 |
| TraesCS6B01G346700.1 | Wheat | mitochondrion | 50.0 | 50.23 |
| Zm00001d052194_P001 | Maize | mitochondrion | 50.0 | 49.54 |
| TraesCS6D01G295500.1 | Wheat | mitochondrion | 49.54 | 49.54 |
| VIT_16s0022g00510.t01 | Wine grape | mitochondrion | 47.69 | 49.52 |
| TraesCS6A01G316200.1 | Wheat | mitochondrion | 48.61 | 48.84 |
| Bra029174.1-P | Field mustard | mitochondrion | 43.98 | 48.22 |
| CDY38862 | Canola | mitochondrion | 43.52 | 47.96 |
| CDX89437 | Canola | mitochondrion | 47.22 | 47.89 |
| Bra013872.1-P | Field mustard | mitochondrion | 47.22 | 47.89 |
| CDY32630 | Canola | mitochondrion | 37.5 | 47.65 |
| CDX99920 | Canola | mitochondrion | 35.19 | 47.5 |
| CDY03368 | Canola | mitochondrion | 46.76 | 47.42 |
| CDY00476 | Canola | mitochondrion | 35.19 | 47.2 |
| VIT_02s0154g00490.t01 | Wine grape | mitochondrion | 43.52 | 46.77 |
| Bra028253.1-P | Field mustard | mitochondrion | 34.72 | 46.58 |
| AT4G25200.1 | Thale cress | mitochondrion | 44.91 | 46.19 |
| TraesCS7B01G083300.1 | Wheat | cytosol | 28.24 | 45.86 |
| KRH39841 | Soybean | mitochondrion | 31.02 | 45.58 |
| AT5G51440.1 | Thale cress | mitochondrion | 42.59 | 43.81 |
| TraesCS7B01G083500.1 | Wheat | mitochondrion | 43.52 | 40.34 |
| TraesCS7D01G179600.1 | Wheat | mitochondrion | 43.52 | 40.17 |
| TraesCS7B01G082900.1 | Wheat | plastid | 35.19 | 38.0 |
| TraesCS7A01G232500.1 | Wheat | plastid | 36.11 | 37.86 |
| OQU76071 | Sorghum | plastid | 35.19 | 37.62 |
| TraesCS7D01G232600.1 | Wheat | plastid | 36.11 | 37.32 |
| TraesCS7D01G179400.1 | Wheat | plastid | 35.65 | 36.67 |
| Zm00001d044874_P001 | Maize | cytosol, plastid | 35.19 | 36.54 |
| TraesCS7A01G236700.1 | Wheat | plastid | 35.65 | 36.32 |
| HORVU7Hr1G036500.7 | Barley | plastid | 34.26 | 36.27 |
| TraesCS7B01G083100.1 | Wheat | plastid | 35.65 | 36.15 |
| OQU75930 | Sorghum | plastid | 37.04 | 35.87 |
| OQU75612 | Sorghum | plastid | 37.04 | 35.87 |
| TraesCS7D01G179300.1 | Wheat | plastid | 35.19 | 35.85 |
| TraesCS7D01G179100.1 | Wheat | plastid | 35.65 | 35.81 |
| TraesCS7D01G179500.1 | Wheat | plastid | 35.65 | 35.81 |
| TraesCS7B01G083200.2 | Wheat | plastid | 36.57 | 35.75 |
| TraesCS7B01G083400.1 | Wheat | plastid | 35.19 | 35.68 |
| TraesCS7A01G177700.1 | Wheat | cytosol, plastid | 35.65 | 35.65 |
| TraesCS7A01G177500.1 | Wheat | cytosol, plastid | 35.65 | 35.65 |
| EER89430 | Sorghum | plastid | 37.04 | 35.24 |
| TraesCS7D01G179000.1 | Wheat | plastid | 34.72 | 35.21 |
| TraesCS7D01G179200.1 | Wheat | cytosol, plastid | 33.8 | 34.93 |
| TraesCS7A01G177600.1 | Wheat | plastid | 34.72 | 34.88 |
| EER89431 | Sorghum | plastid | 33.33 | 33.18 |
| TraesCS2B01G531300.1 | Wheat | plastid | 26.39 | 32.39 |
| HORVU6Hr1G077710.3 | Barley | cytosol | 40.28 | 31.87 |
| HORVU7Hr1G036570.2 | Barley | cytosol | 32.41 | 31.67 |
| HORVU7Hr1G036470.3 | Barley | cytosol, nucleus | 34.26 | 30.58 |
| HORVU7Hr1G036540.3 | Barley | mitochondrion, nucleus, plastid | 36.11 | 30.23 |
| TraesCS7B01G130900.1 | Wheat | plastid | 22.22 | 29.63 |
| KXG19616 | Sorghum | plastid | 36.57 | 29.37 |
| TraesCS7A01G177800.1 | Wheat | nucleus | 29.17 | 27.39 |
| Os06t0219500-00 | Rice | mitochondrion | 38.43 | 26.86 |
| Solyc08g078710.1.1 | Tomato | mitochondrion | 23.61 | 26.02 |
| PGSC0003DMT400012247 | Potato | mitochondrion | 22.69 | 25.13 |
| Solyc08g078720.2.1 | Tomato | mitochondrion | 17.59 | 22.62 |
| TraesCS5B01G123900.1 | Wheat | plastid | 24.07 | 21.76 |
| PGSC0003DMT400012246 | Potato | plastid | 16.67 | 21.18 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr10P30370_001 | EnsemblPlants:GSMUA_Achr10T30370_001 | EnsemblPlantsGene:GSMUA_Achr10G30370_001 | Gene3D:2.60.40.790 | InterPro:A-crystallin/Hsp20_dom | InterPro:HSP20 |
| InterPro:HSP20-like_chaperone | InterPro:IPR002068 | InterPro:IPR008978 | PANTHER:PTHR11527 | PANTHER:PTHR11527:SF176 | PFAM:PF00011 |
| PFscan:PS01031 | SEG:seg | SUPFAM:SSF49764 | UniParc:UPI000295FEC6 | UniProt:M0RMR1 | MapMan:19.1.8.8 |
Description
Heat shock 22 kDa protein, mitochondrial [Source:GMGC_GENE;Acc:GSMUA_Achr10G30370_001]
Coordinates
chr10:-:32596228..32597201
Molecular Weight (calculated)
24055.4 Da
IEP (calculated)
6.377
GRAVY (calculated)
-0.645
Length
216 amino acids
Sequence
(BLAST)
(BLAST)
001: MIASRSAALS KLVERLLVSP GRPVAAATTR LFSTGTLRDY DDDNRDVDLE RRPDSPAAAH RRRADSFPSL QGKVFDPFNP TRSLSQVLNL MDQMLDNPIF
101: AAAGPSGAAG GLRRGWDARE DEHALHLRVD MPGLGKEHVK VWAEHNTLVI KGESDKEAGE EGEESTGRRY SSRIDLPPES YRLDQIRAEM KNGVLKVVVP
201: KVKEEERKDV FQVNIE
101: AAAGPSGAAG GLRRGWDARE DEHALHLRVD MPGLGKEHVK VWAEHNTLVI KGESDKEAGE EGEESTGRRY SSRIDLPPES YRLDQIRAEM KNGVLKVVVP
201: KVKEEERKDV FQVNIE
001: MASALALKRL LSSSIAPRSR SVLRPAVSSR LFNTNAVRSY DDDGENGDGV DLYRRSVPRR RGDFFSDVFD PFSPTRSVSQ VLNLMDQFME NPLLSATRGM
101: GASGARRGWD IKEKDDALYL RIDMPGLSRE DVKLALEQDT LVIRGEGKNE EDGGEEGESG NRRFTSRIGL PDKIYKIDEI KAEMKNGVLK VVIPKMKEQE
201: RNDVRQIEIN
101: GASGARRGWD IKEKDDALYL RIDMPGLSRE DVKLALEQDT LVIRGEGKNE EDGGEEGESG NRRFTSRIGL PDKIYKIDEI KAEMKNGVLK VVIPKMKEQE
201: RNDVRQIEIN
Arabidopsis Description
HSP23.6HSP23.6-MITO [Source:UniProtKB/TrEMBL;Acc:A0A178USN5]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.