Factsheet for GSMUA_Achr9P24750_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid

Predictor Summary:

plastid 8
mitochondrion 2

Predictors

GFP

MS/MS

Papers

plasma membrane: 21334471

msms PMID: 21334471 doi

A Vertommen, AL Møller, JH Cordewener, R Swennen, B Panis, C Finnie, AH America, SC Carpentier

Laboratory of Tropical Crop Improvement, Department of Biosystems, K.U. Leuven, Kasteelpark Arenberg 13, PO box 2455, B-3001 Heverlee, Belgium.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_00s0904g00010.t01	Wine grape	plastid	74.06	67.97
GSMUA_Achr4P23940_001	Banana	plastid	75.47	67.8
AT4G21280.2	Thale cress	plastid	70.28	66.52
KRH48778	Soybean	nucleus, plastid	73.58	66.1
CDX82819	Canola	plastid	70.28	65.64
CDY46373	Canola	plastid	67.45	65.6
KRH66566	Soybean	nucleus, plastid	71.7	65.52
CDX79052	Canola	plastid	69.81	65.2
Bra013517.1-P	Field mustard	plastid	69.81	65.2
CDX82816	Canola	cytosol, peroxisome, plastid	32.55	63.89
Bra029563.1-P	Field mustard	plastid	67.92	63.72
CDY39157	Canola	plastid	67.45	63.27
AT4G05180.1	Thale cress	plastid	66.51	61.3
PGSC0003DMT400055931	Potato	cytosol, extracellular, plastid	61.32	56.52
Solyc02g079950.2.1	Tomato	plastid	61.32	56.52
KRG94557	Soybean	plastid	39.62	56.38
GSMUA_Achr1P02890_001	Banana	plastid	23.11	26.49

Protein Annotations

MapMan:1.1.1.2.2.2.2	Gene3D:1.20.120.290	GO:GO:0003674	GO:GO:0005488	GO:GO:0005509	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0008150	GO:GO:0008152	GO:GO:0009523	GO:GO:0009579
GO:GO:0009654	GO:GO:0009987	GO:GO:0015979	GO:GO:0016020	GO:GO:0019898	EnsemblPlantsGene:GSMUA_Achr9G24750_001
EnsemblPlants:GSMUA_Achr9P24750_001	EnsemblPlants:GSMUA_Achr9T24750_001	UniProt:M0U382	PFAM:PF05757	InterPro:PSII_PsbQ	PANTHER:PTHR33399
PANTHER:PTHR33399:SF3	InterPro:PsbQ-like_dom_sf	SUPFAM:SSF101112	UniParc:UPI000296BFA2	SEG:seg	:

Description

Oxygen-evolving enhancer protein 3-2, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_Achr9G24750_001]

Coordinates

chr9:-:29438231..29439397

Molecular Weight (calculated)

22518.2 Da

IEP (calculated)

10.118

GRAVY (calculated)

-0.233

Length

212 amino acids

Sequence
(BLAST)

001: MASMAGLRGL SQALLEGSLQ LGGSSRLAAA TEGDSSAAHS SRRAVLGIVA TGLAGGSFVK AVLADAKSIK VGPPPPPSGG LPGTLNSDQP RDLQLPLNQR
101: FYLQPLPPSE AAARAKESAK DILNVKQLID KKEWPYVMND LRLKAGYLRF DLNTIISAKP KEEKKTLKEL TGKLFAAIDE LDHAAKIKST PQAEKYYATT
201: KSLLDDVLAK IG

Best Arabidopsis Sequence Match ( AT4G21280.1 )
(BLAST)

001: MASMGGLHGA SPAVLEGSLK INGSSRLNGS GRVAVAQRSR LVVRAQQSEE TSRRSVIGLV AAGLAGGSFV QAVLADAISI KVGPPPAPSG GLPGTDNSDQ
101: ARDFALALKD RFYLQPLPPT EAAARAKESA KDIINVKPLI DRKAWPYVQN DLRSKASYLR YDLNTIISSK PKDEKKSLKD LTTKLFDTID NLDYAAKKKS
201: PSQAEKYYAE TVSALNEVLA KLG

Arabidopsis Description

PSBQ1Oxygen-evolving enhancer protein 3-1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9XFT3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.