Factsheet for Bra029563.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY39157	Canola	plastid	99.56	99.56
CDY46373	Canola	plastid	88.94	92.2
AT4G05180.1	Thale cress	plastid	90.27	88.7
Bra013517.1-P	Field mustard	plastid	73.45	73.13
VIT_00s0904g00010.t01	Wine grape	plastid	70.8	69.26
KRH66566	Soybean	nucleus, plastid	69.91	68.1
GSMUA_Achr9P24750_001	Banana	plasma membrane, plastid	63.72	67.92
KRH48778	Soybean	nucleus, plastid	70.8	67.8
PGSC0003DMT400055931	Potato	cytosol, extracellular, plastid	65.93	64.78
Solyc02g079950.2.1	Tomato	plastid	65.93	64.78
GSMUA_Achr4P23940_001	Banana	plastid	65.93	63.14
EER97341	Sorghum	plastid	60.62	62.84
Zm00001d021703_P001	Maize	plastid	60.18	62.67
Zm00001d006540_P001	Maize	plastid	59.29	62.04
TraesCS2A01G215000.1	Wheat	plastid	57.08	60.28
TraesCS2B01G240000.1	Wheat	plastid	57.08	60.28
TraesCS2D01G220800.1	Wheat	plastid	57.08	60.28
Os07t0544800-01	Rice	extracellular, plastid	57.52	59.91
KRG94557	Soybean	plastid	34.96	53.02
HORVU2Hr1G043960.1	Barley	mitochondrion	50.44	44.19
HORVU0Hr1G003270.1	Barley	cytosol	54.42	43.31
Bra039759.1-P	Field mustard	plastid	17.7	11.24

Protein Annotations

MapMan:1.1.1.2.2.2.2	Gene3D:1.20.120.290	EnsemblPlantsGene:Bra029563	EnsemblPlants:Bra029563.1	EnsemblPlants:Bra029563.1-P	GO:GO:0003674
GO:GO:0005488	GO:GO:0005509	GO:GO:0005575	GO:GO:0005576	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0008150	GO:GO:0008152	GO:GO:0009507	GO:GO:0009523	GO:GO:0009534
GO:GO:0009535	GO:GO:0009536	GO:GO:0009570	GO:GO:0009579	GO:GO:0009654	GO:GO:0009987
GO:GO:0015979	GO:GO:0016020	GO:GO:0019898	GO:GO:0031977	GO:GO:0048046	UniProt:M4EL96
PFAM:PF05757	InterPro:PSII_PsbQ	PANTHER:PTHR33399	PANTHER:PTHR33399:SF3	InterPro:PsbQ-like_dom_sf	SUPFAM:SSF101112
UniParc:UPI00025425B2	SEG:seg	:	:	:	:

Description

AT4G05180 (E=6e-086) PSBQ, PSBQ-2, PSII-Q | PSBQ-2; calcium ion binding

Coordinates

chrA09:+:16980585..16981997

Molecular Weight (calculated)

24342.0 Da

IEP (calculated)

10.327

GRAVY (calculated)

-0.373

Length

226 amino acids

Sequence
(BLAST)

001: MAQAMTSMAG LRGASQALQT NDSNRLSISR VTVGSKRTGL VIRAQQNESV PESSRRSVIG LVAAGLVGGS FVKSAVAAEA LAIKVGPPPP PSGGLPGTDN
101: SDQARDFSLK LKDRFYLQPL SPTEAAARAK ESAKEIINVK TLIDKKAWPY VQNDLRLRAS YLRYDLNTVI SAKPKEEKQS LKELTGKLFQ TIDNLDYAAR
201: SKSSPDAEKY YSETVSSLNN VLAKIG

Best Arabidopsis Sequence Match ( AT4G05180.1 )
(BLAST)

001: MAQAVTSMAG LRGASQAVLE GSLQINGSNR LNISRVSVGS QRTGLVIRAQ QNVSVPESSR RSVIGLVAAG LAGGSFVKAV FAEAIPIKVG GPPLPSGGLP
101: GTDNSDQARD FSLALKDRFY IQPLSPTEAA ARAKDSAKEI INVKSFIDKK AWPYVQNDLR LRASYLRYDL NTVISAKPKE EKQSLKDLTA KLFQTIDNLD
201: YAARSKSSPD AEKYYSETVS SLNNVLAKLG

Arabidopsis Description

PSBQ2Oxygen-evolving enhancer protein 3-2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q41932]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.