CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH66566	Soybean	nucleus, plastid	89.93	57.76
KRH48778	Soybean	nucleus, plastid	84.56	53.39
CDX82816	Canola	cytosol, peroxisome, plastid	36.91	50.93
VIT_00s0904g00010.t01	Wine grape	plastid	69.8	45.02
GSMUA_Achr4P23940_001	Banana	plastid	63.09	39.83
GSMUA_Achr9P24750_001	Banana	plasma membrane, plastid	56.38	39.62
AT4G21280.2	Thale cress	plastid	58.39	38.84
CDX79052	Canola	plastid	59.06	38.77
Bra013517.1-P	Field mustard	plastid	59.06	38.77
CDX82819	Canola	plastid	57.72	37.89
PGSC0003DMT400055931	Potato	cytosol, extracellular, plastid	57.05	36.96
Solyc02g079950.2.1	Tomato	plastid	57.05	36.96
AT4G05180.1	Thale cress	plastid	54.36	35.22
Bra029563.1-P	Field mustard	plastid	53.02	34.96
CDY39157	Canola	plastid	52.35	34.51
CDY46373	Canola	plastid	49.66	33.95
Os07t0544800-01	Rice	extracellular, plastid	47.65	32.72
TraesCS2A01G215000.1	Wheat	plastid	42.28	29.44
TraesCS2B01G240000.1	Wheat	plastid	42.28	29.44
TraesCS2D01G220800.1	Wheat	plastid	41.61	28.97
EER97341	Sorghum	plastid	42.28	28.9
Zm00001d006540_P001	Maize	plastid	41.61	28.7
Zm00001d021703_P001	Maize	plastid	41.61	28.57
HORVU0Hr1G003270.1	Barley	cytosol	40.27	21.13
HORVU2Hr1G043960.1	Barley	mitochondrion	30.2	17.44
KRG98043	Soybean	plastid	6.04	4.84
KRH30742	Soybean	plastid	6.04	4.46

Protein Annotations

Gene3D:1.20.120.290	MapMan:35.1	UniProt:A0A0R0EJT5	EMBL:ACUP02011982	EnsemblPlantsGene:GLYMA_19G093600	GO:GO:0003674
GO:GO:0005488	GO:GO:0005509	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0008150
GO:GO:0008152	GO:GO:0009523	GO:GO:0009579	GO:GO:0009654	GO:GO:0009987	GO:GO:0015979
GO:GO:0016020	GO:GO:0019898	EnsemblPlants:KRG94557	ProteinID:KRG94557	ProteinID:KRG94557.1	PFAM:PF05757
InterPro:PSII_PsbQ	PANTHER:PTHR33399	PANTHER:PTHR33399:SF3	UniParc:UPI0006ED5745	SEG:seg	:

Description

hypothetical protein

Coordinates

chr19:-:33034130..33035400

Molecular Weight (calculated)

15692.1 Da

IEP (calculated)

11.002

GRAVY (calculated)

-0.140

Length

149 amino acids

Sequence
(BLAST)

001: MASMTSLHGS SQAMLEGSLG SVRLNVGSGS RVASVTHVGF TVKAQQQQVN GGEVQSSRRA MLSLVATGLA TGSFVQVVLI DAKPIKVGPP PPPSGRLPGT
101: LNSDEPRHLK LPLKDRFFLE PLSPTDVAQR AKESAKEIVG VKKLIEKKA

Best Arabidopsis Sequence Match ( AT4G21280.1 )
(BLAST)

001: MASMGGLHGA SPAVLEGSLK INGSSRLNGS GRVAVAQRSR LVVRAQQSEE TSRRSVIGLV AAGLAGGSFV QAVLADAISI KVGPPPAPSG GLPGTDNSDQ
101: ARDFALALKD RFYLQPLPPT EAAARAKESA KDIINVKPLI DRKAWPYVQN DLRSKASYLR YDLNTIISSK PKDEKKSLKD LTTKLFDTID NLDYAAKKKS
201: PSQAEKYYAE TVSALNEVLA KLG

Arabidopsis Description

PSBQ1Oxygen-evolving enhancer protein 3-1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9XFT3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.