Factsheet for Zm00001d021703_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plastid

plastid: 20089766
plastid: 21196305
plastid: 22065420
plastid: 23198870
mitochondrion: 27297264

msms PMID: 27297264 doi

D Dahal, KJ Newton, BP Mooney

Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.

msms PMID: 20089766 doi

G Friso, W Majeran, M Huang, Q Sun, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.

msms PMID: 23198870 doi

M Huang, G Friso, K Nishimura, X Qu, PD Olinares, W Majeran, Q Sun, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, United States.

msms PMID: 22065420 doi

W Majeran, G Friso, Y Asakura, X Qu, M Huang, L Ponnala, KP Watkins, A Barkan, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.

msms PMID: 21196305

XY Liu, YD Wu, ZY Shen, Z Shen, HH Li, XM Yu, XF Yan, CH Guo, BC Wang

Key Laboratory of Forest Tree Genetic Improvement and Biotechnology, Ministry of Education, Northeast Forestry University, Harbin, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER97341	Sorghum	plastid	90.32	89.91
Zm00001d006540_P001	Maize	plastid	83.87	84.26
Os07t0544800-01	Rice	extracellular, plastid	74.65	74.65
TraesCS2B01G240000.1	Wheat	plastid	68.66	69.63
TraesCS2A01G215000.1	Wheat	plastid	68.2	69.16
TraesCS2D01G220800.1	Wheat	plastid	67.74	68.69
CDY46373	Canola	plastid	62.67	62.39
VIT_00s0904g00010.t01	Wine grape	plastid	64.98	61.04
Bra029563.1-P	Field mustard	plastid	62.67	60.18
Bra013517.1-P	Field mustard	plastid	62.67	59.91
CDX79052	Canola	plastid	62.67	59.91
AT4G21280.2	Thale cress	plastid	61.75	59.82
CDY39157	Canola	plastid	62.21	59.73
KRH66566	Soybean	nucleus, plastid	63.59	59.48
CDX82819	Canola	plastid	62.21	59.47
CDX82816	Canola	cytosol, peroxisome, plastid	29.49	59.26
KRH48778	Soybean	nucleus, plastid	64.06	58.9
GSMUA_Achr4P23940_001	Banana	plastid	64.06	58.9
AT4G05180.1	Thale cress	plastid	60.83	57.39
Solyc02g079950.2.1	Tomato	plastid	60.37	56.96
PGSC0003DMT400055931	Potato	cytosol, extracellular, plastid	59.91	56.52
HORVU2Hr1G043960.1	Barley	mitochondrion	58.53	49.22
HORVU0Hr1G003270.1	Barley	cytosol	62.67	47.89
KRG94557	Soybean	plastid	28.57	41.61
Zm00001d002993_P001	Maize	plastid	20.74	24.19

Protein Annotations

MapMan:1.1.1.2.2.2.2	Gene3D:1.20.120.290	EntrezGene:542279	UniProt:B4G259	EMBL:BT043447	GO:GO:0003674
GO:GO:0005488	GO:GO:0005509	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0008150	GO:GO:0008152	GO:GO:0009507	GO:GO:0009523	GO:GO:0009535	GO:GO:0009536
GO:GO:0009579	GO:GO:0009654	GO:GO:0009987	GO:GO:0015979	GO:GO:0016020	GO:GO:0019898
EMBL:M87435	ProteinID:ONM58057.1	PFAM:PF05757	InterPro:PSII_PsbQ	PANTHER:PTHR33399	PANTHER:PTHR33399:SF3
InterPro:PsbQ-like_dom_sf	UniProt:Q41048	SUPFAM:SSF101112	UniParc:UPI0000132808	EnsemblPlantsGene:Zm00001d021703	EnsemblPlants:Zm00001d021703_P001
EnsemblPlants:Zm00001d021703_T001	SEG:seg	:	:	:	:

Description

oxygen evolving complex2 oxygen evolving complex2

Coordinates

chr7:+:160760828..160761969

Molecular Weight (calculated)

23134.0 Da

IEP (calculated)

10.414

GRAVY (calculated)

-0.219

Length

217 amino acids

Sequence
(BLAST)

001: MAQAMASMTG LSQGVLPSRR ADSRTRTAVV IVRASAEGDA VAQAGRRAVI GLVATGIVGG ALSQAARAET VKTIKIGAPP PPSGGLPGTL NSDQARDFDL
101: PLKERFYLQP LPPAEAAARV KTSAQDIINL KPLIDKKAWP YVQNDLRLRA SYLRYDLKTV IASKPKEEKK SLKELTGKLF STIDDLDHAA KIKSTPEAEK
201: YFAATKDALG DVLAKLG

Best Arabidopsis Sequence Match ( AT4G05180.1 )
(BLAST)

001: MAQAVTSMAG LRGASQAVLE GSLQINGSNR LNISRVSVGS QRTGLVIRAQ QNVSVPESSR RSVIGLVAAG LAGGSFVKAV FAEAIPIKVG GPPLPSGGLP
101: GTDNSDQARD FSLALKDRFY IQPLSPTEAA ARAKDSAKEI INVKSFIDKK AWPYVQNDLR LRASYLRYDL NTVISAKPKE EKQSLKDLTA KLFQTIDNLD
201: YAARSKSSPD AEKYYSETVS SLNNVLAKLG

Arabidopsis Description

PSBQ2Oxygen-evolving enhancer protein 3-2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q41932]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.