CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra029563.1-P	Field mustard	plastid	92.2	88.94
CDY39157	Canola	plastid	91.74	88.5
AT4G05180.1	Thale cress	plastid	83.94	79.57
CDX82816	Canola	cytosol, peroxisome, plastid	34.4	69.44
CDX82819	Canola	plastid	72.02	69.16
CDX79052	Canola	plastid	71.56	68.72
GSMUA_Achr9P24750_001	Banana	plasma membrane, plastid	65.6	67.45
VIT_00s0904g00010.t01	Wine grape	plastid	69.72	65.8
KRH66566	Soybean	nucleus, plastid	68.81	64.66
KRH48778	Soybean	nucleus, plastid	69.72	64.41
EER97341	Sorghum	plastid	62.84	62.84
Zm00001d021703_P001	Maize	plastid	62.39	62.67
Zm00001d006540_P001	Maize	plastid	61.01	61.57
PGSC0003DMT400055931	Potato	cytosol, extracellular, plastid	64.68	61.3
Solyc02g079950.2.1	Tomato	plastid	64.68	61.3
TraesCS2A01G215000.1	Wheat	plastid	58.72	59.81
TraesCS2B01G240000.1	Wheat	plastid	58.72	59.81
TraesCS2D01G220800.1	Wheat	plastid	58.72	59.81
Os07t0544800-01	Rice	extracellular, plastid	59.17	59.45
GSMUA_Achr4P23940_001	Banana	plastid	64.22	59.32
KRG94557	Soybean	plastid	33.95	49.66
HORVU2Hr1G043960.1	Barley	mitochondrion	52.29	44.19
HORVU0Hr1G003270.1	Barley	cytosol	54.59	41.9
CDY58679	Canola	plastid	17.89	20.74
CDY16443	Canola	plastid	16.97	10.36

Protein Annotations

MapMan:1.1.1.2.2.2.2	Gene3D:1.20.120.290	GO:A0A078IAV5	UniProt:A0A078IAV5	EnsemblPlants:CDY46373	ProteinID:CDY46373
ProteinID:CDY46373.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005509	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0008150	GO:GO:0008152	GO:GO:0009523	GO:GO:0009579	GO:GO:0009654
GO:GO:0009987	GO:GO:0015979	GO:GO:0016020	GO:GO:0019898	EnsemblPlantsGene:GSBRNA2T00083822001	PFAM:PF05757
InterPro:PSII_PsbQ	PANTHER:PTHR33399	PANTHER:PTHR33399:SF3	InterPro:PsbQ-like_dom_sf	SUPFAM:SSF101112	UniParc:UPI0004EDB9F1
SEG:seg	:	:	:	:	:

Description

BnaA09g19870DBnaA09g19870D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IAV5]

Coordinates

chrLK032664:+:83151..84846

Molecular Weight (calculated)

23402.9 Da

IEP (calculated)

10.327

GRAVY (calculated)

-0.350

Length

218 amino acids

Sequence
(BLAST)

001: MAQAMTSMAG LRGASQALQT NDSNRLSISR VTVGSKRTGL SVPESSRRSV IGLVAAGLVG GSFVKSAVAA EALAIKVGPP PPPSGGLPGT DNSDQARDFS
101: LKLKDRFYLQ PLSPTEAAAR AKESAKEIIN VKTLIDKKAW PYVQNDLRLR ASYLRYDLNT VISAKPKEEK QSLKELTGKL FQTIDNLDYA ARSKSSPDAE
201: KYYSETVSSL NNVLAKIG

Best Arabidopsis Sequence Match ( AT4G05180.1 )
(BLAST)

001: MAQAVTSMAG LRGASQAVLE GSLQINGSNR LNISRVSVGS QRTGLVIRAQ QNVSVPESSR RSVIGLVAAG LAGGSFVKAV FAEAIPIKVG GPPLPSGGLP
101: GTDNSDQARD FSLALKDRFY IQPLSPTEAA ARAKDSAKEI INVKSFIDKK AWPYVQNDLR LRASYLRYDL NTVISAKPKE EKQSLKDLTA KLFQTIDNLD
201: YAARSKSSPD AEKYYSETVS SLNNVLAKLG

Arabidopsis Description

PSBQ2Oxygen-evolving enhancer protein 3-2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q41932]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.