Factsheet for GSMUA_Achr4P23940_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_00s0904g00010.t01	Wine grape	plastid	74.58	76.19
GSMUA_Achr9P24750_001	Banana	plasma membrane, plastid	67.8	75.47
KRH48778	Soybean	nucleus, plastid	73.73	73.73
KRH66566	Soybean	nucleus, plastid	72.03	73.28
AT4G21280.2	Thale cress	plastid	65.25	68.75
Solyc02g079950.2.1	Tomato	plastid	66.1	67.83
PGSC0003DMT400055931	Potato	cytosol, extracellular, plastid	66.1	67.83
CDX82819	Canola	plastid	64.41	66.96
Bra013517.1-P	Field mustard	plastid	63.98	66.52
CDX79052	Canola	plastid	63.98	66.52
AT4G05180.1	Thale cress	plastid	64.41	66.09
Bra029563.1-P	Field mustard	plastid	63.14	65.93
Os07t0544800-01	Rice	extracellular, plastid	60.59	65.9
CDY39157	Canola	plastid	62.71	65.49
CDY46373	Canola	plastid	59.32	64.22
Zm00001d021703_P001	Maize	plastid	58.9	64.06
KRG94557	Soybean	plastid	39.83	63.09
TraesCS2A01G215000.1	Wheat	plastid	57.2	63.08
TraesCS2B01G240000.1	Wheat	plastid	57.2	63.08
TraesCS2D01G220800.1	Wheat	plastid	57.2	63.08
Zm00001d006540_P001	Maize	plastid	57.63	62.96
EER97341	Sorghum	plastid	58.05	62.84
CDX82816	Canola	cytosol, peroxisome, plastid	28.39	62.04
HORVU0Hr1G003270.1	Barley	cytosol	55.93	46.48
HORVU2Hr1G043960.1	Barley	mitochondrion	48.73	44.57
GSMUA_Achr1P02890_001	Banana	plastid	20.76	26.49

Protein Annotations

MapMan:1.1.1.2.2.2.2	Gene3D:1.20.120.290	GO:GO:0003674	GO:GO:0005488	GO:GO:0005509	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0008150	GO:GO:0008152	GO:GO:0009523	GO:GO:0009579
GO:GO:0009654	GO:GO:0009987	GO:GO:0015979	GO:GO:0016020	GO:GO:0019898	EnsemblPlantsGene:GSMUA_Achr4G23940_001
EnsemblPlants:GSMUA_Achr4P23940_001	EnsemblPlants:GSMUA_Achr4T23940_001	UniProt:M0SRK5	PFAM:PF05757	InterPro:PSII_PsbQ	PANTHER:PTHR33399
PANTHER:PTHR33399:SF3	InterPro:PsbQ-like_dom_sf	SUPFAM:SSF101112	UniParc:UPI000295DA7C	SEG:seg	:

Description

Oxygen-evolving enhancer protein 3-2, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_Achr4G23940_001]

Coordinates

chr4:-:23935622..23936678

Molecular Weight (calculated)

24736.8 Da

IEP (calculated)

10.135

GRAVY (calculated)

-0.177

Length

236 amino acids

Sequence
(BLAST)

001: MAQSLASVAG LRGASQAVLE GSLQLSGSSR LPAPAPHHRV AVSRPGLAVR AQQAPAEGEA TAQSGRRAVL GLVAAGLAGG SFAQAVLAEA KSIKVGPPPP
101: PSGGLPGTLN SDEPRDLDLP LKERFFLQPL GPAEAAARAK ESAKDIIGVK EFIDQKAWPY VMNNLRLKAE YLRYDLNTVI SAKPKEEKKP LKELSGKLFA
201: TISELDHAAK IKSSSEAAKY YAATKSILDD VIAKLG

Best Arabidopsis Sequence Match ( AT4G05180.1 )
(BLAST)

001: MAQAVTSMAG LRGASQAVLE GSLQINGSNR LNISRVSVGS QRTGLVIRAQ QNVSVPESSR RSVIGLVAAG LAGGSFVKAV FAEAIPIKVG GPPLPSGGLP
101: GTDNSDQARD FSLALKDRFY IQPLSPTEAA ARAKDSAKEI INVKSFIDKK AWPYVQNDLR LRASYLRYDL NTVISAKPKE EKQSLKDLTA KLFQTIDNLD
201: YAARSKSSPD AEKYYSETVS SLNNVLAKLG

Arabidopsis Description

PSBQ2Oxygen-evolving enhancer protein 3-2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q41932]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.