Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os04t0523000-00 | Rice | plastid | 47.57 | 47.57 |
| TraesCS2D01G374900.1 | Wheat | plastid | 47.03 | 44.85 |
| TraesCS2B01G395700.1 | Wheat | plastid | 45.95 | 44.5 |
| Zm00001d002993_P001 | Maize | plastid | 44.32 | 44.09 |
| PGSC0003DMT400063427 | Potato | plastid | 38.38 | 40.8 |
| TraesCS2A01G378700.1 | Wheat | plastid | 47.57 | 39.82 |
| KRG98043 | Soybean | plastid | 37.3 | 37.1 |
| VIT_12s0142g00310.t01 | Wine grape | endoplasmic reticulum, extracellular | 42.16 | 34.06 |
| HORVU2Hr1G090100.1 | Barley | plastid | 35.14 | 30.52 |
| AT2G01918.1 | Thale cress | plastid | 30.81 | 30.48 |
| CDY58679 | Canola | plastid | 28.11 | 27.66 |
| KRH30742 | Soybean | plastid | 29.19 | 26.73 |
| KXG26739 | Sorghum | plastid | 43.24 | 26.14 |
| GSMUA_Achr9P24750_001 | Banana | plasma membrane, plastid | 26.49 | 23.11 |
| GSMUA_Achr4P23940_001 | Banana | plastid | 26.49 | 20.76 |
| Bra039759.1-P | Field mustard | plastid | 26.49 | 13.76 |
| CDY16443 | Canola | plastid | 26.49 | 13.73 |
Protein Annotations
| Gene3D:1.20.120.290 | MapMan:35.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005509 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0006091 | GO:GO:0006950 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009409 | GO:GO:0009523 | GO:GO:0009579 | GO:GO:0009628 | GO:GO:0009654 |
| GO:GO:0009767 | GO:GO:0009987 | GO:GO:0015979 | GO:GO:0016020 | GO:GO:0019898 | GO:GO:0045156 |
| EnsemblPlantsGene:GSMUA_Achr1G02890_001 | EnsemblPlants:GSMUA_Achr1P02890_001 | EnsemblPlants:GSMUA_Achr1T02890_001 | UniProt:M0RWJ7 | PFAM:PF05757 | InterPro:PSII_PsbQ |
| PANTHER:PTHR33399 | PANTHER:PTHR33399:SF6 | InterPro:PsbQ-like_dom_sf | SUPFAM:SSF101112 | UniParc:UPI00029544D4 | SEG:seg |
Description
Putative Oxygen-evolving enhancer protein 3-1, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_Achr1G02890_001]
Coordinates
chr1:+:2344820..2345563
Molecular Weight (calculated)
20314.3 Da
IEP (calculated)
8.836
GRAVY (calculated)
-0.154
Length
185 amino acids
Sequence
(BLAST)
(BLAST)
001: MASPMSLRHC STNPSLGVVC RLHGHSKLGH AAPGLPEQLL IGRRQATAAA AVAVALHAKE AISGSSVASA LEFRFTAPEQ TPEEADAVVK IHARDLVRIK
101: ALIDSQSWRE AQIALRESSS YLKQDLYTII QAKPGSQRPQ LRKLYSHLFN DVSSLDYAAR DKDARRVQEC YDNIVATLNE IFVLI
101: ALIDSQSWRE AQIALRESSS YLKQDLYTII QAKPGSQRPQ LRKLYSHLFN DVSSLDYAAR DKDARRVQEC YDNIVATLNE IFVLI
001: MAISKPPPLH FTFFHNQDSS IDTSDSNLAL SIDTSRRRRD VLLTISGTLI PQLFFFDRKR SSSANAADFF NFGAPPPEPE RTVELAQEGL RKNAENIKRI
101: KEIMIEKKLW KEGGKELRRS ASNMKQDFYL IIQAKPPKDR PLFRSLYSSL FNSITKMDYA ARDGDETKVL EYYINIVAIL DDIFPRI
101: KEIMIEKKLW KEGGKELRRS ASNMKQDFYL IIQAKPPKDR PLFRSLYSSL FNSITKMDYA ARDGDETKVL EYYINIVAIL DDIFPRI
Arabidopsis Description
PQL3PsbQ-like protein 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q2V4B2]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.