Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 6
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d002993_P001 | Maize | plastid | 44.44 | 73.12 |
| Os04t0523000-00 | Rice | plastid | 35.29 | 58.38 |
| TraesCS2D01G374900.1 | Wheat | plastid | 35.95 | 56.7 |
| TraesCS2B01G395700.1 | Wheat | plastid | 35.29 | 56.54 |
| TraesCS2A01G378700.1 | Wheat | plastid | 36.93 | 51.13 |
| GSMUA_Achr1P02890_001 | Banana | plastid | 26.14 | 43.24 |
| PGSC0003DMT400063427 | Potato | plastid | 24.18 | 42.53 |
| HORVU2Hr1G090100.1 | Barley | plastid | 28.1 | 40.38 |
| KRG98043 | Soybean | plastid | 20.91 | 34.41 |
| AT2G01918.1 | Thale cress | plastid | 19.93 | 32.62 |
| VIT_12s0142g00310.t01 | Wine grape | endoplasmic reticulum, extracellular | 23.53 | 31.44 |
| CDY58679 | Canola | plastid | 18.95 | 30.85 |
| KRH30742 | Soybean | plastid | 15.69 | 23.76 |
| EER97341 | Sorghum | plastid | 15.69 | 22.02 |
| Bra039759.1-P | Field mustard | plastid | 19.93 | 17.13 |
| CDY16443 | Canola | plastid | 17.32 | 14.85 |
Protein Annotations
| Gene3D:1.20.120.290 | MapMan:35.1 | UniProt:A0A1B6PM37 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005509 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009523 |
| GO:GO:0009579 | GO:GO:0009654 | GO:GO:0009987 | GO:GO:0015979 | GO:GO:0016020 | GO:GO:0019898 |
| EnsemblPlants:KXG26739 | ProteinID:KXG26739 | ProteinID:KXG26739.1 | PFAM:PF05757 | InterPro:PSII_PsbQ | PANTHER:PTHR33399 |
| PANTHER:PTHR33399:SF6 | InterPro:PsbQ-like_dom_sf | EnsemblPlantsGene:SORBI_3006G151100 | SUPFAM:SSF101112 | SignalP:SignalP-noTM | UniParc:UPI00081ACF91 |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr6:+:51194675..51196318
Molecular Weight (calculated)
33117.3 Da
IEP (calculated)
10.169
GRAVY (calculated)
-0.300
Length
306 amino acids
Sequence
(BLAST)
(BLAST)
001: MALRLAVQAL SATLLSRAET TSPSPKPPSK SNNSKQQSQR PAGAAAAATT TSGRRLATAS VAAVLASQLL PPVASSGAGT FDLRLTLPEK SSEEAEAVVR
101: THARNLLGVK RFIDAGAWRE LQAALRASAS NLKQDLYAII QAKPTGQRPE LRRLYSDLFN SVTSLDYAAR DKDQVQVQEH YGNIVSALDE IFAKIINELG
201: AGKTIIPSQK KPAKQVVTFL GYKRWSTDIE LGTWIAFTTS HAGRATNGDR QKGSFLLCSG FFLENYLASS CELPPLHLFS LMSEGETKRN HSSYLQVQQG
301: HKNCSS
101: THARNLLGVK RFIDAGAWRE LQAALRASAS NLKQDLYAII QAKPTGQRPE LRRLYSDLFN SVTSLDYAAR DKDQVQVQEH YGNIVSALDE IFAKIINELG
201: AGKTIIPSQK KPAKQVVTFL GYKRWSTDIE LGTWIAFTTS HAGRATNGDR QKGSFLLCSG FFLENYLASS CELPPLHLFS LMSEGETKRN HSSYLQVQQG
301: HKNCSS
001: MAISKPPPLH FTFFHNQDSS IDTSDSNLAL SIDTSRRRRD VLLTISGTLI PQLFFFDRKR SSSANAADFF NFGAPPPEPE RTVELAQEGL RKNAENIKRI
101: KEIMIEKKLW KEGGKELRRS ASNMKQDFYL IIQAKPPKDR PLFRSLYSSL FNSITKMDYA ARDGDETKVL EYYINIVAIL DDIFPRI
101: KEIMIEKKLW KEGGKELRRS ASNMKQDFYL IIQAKPPKDR PLFRSLYSSL FNSITKMDYA ARDGDETKVL EYYINIVAIL DDIFPRI
Arabidopsis Description
PQL3PsbQ-like protein 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q2V4B2]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.