Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
- nucleus 1
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG98043 | Soybean | plastid | 44.25 | 41.4 |
| Os04t0523000-00 | Rice | plastid | 42.53 | 40.0 |
| GSMUA_Achr1P02890_001 | Banana | plastid | 40.8 | 38.38 |
| TraesCS2B01G395700.1 | Wheat | plastid | 41.95 | 38.22 |
| TraesCS2D01G374900.1 | Wheat | plastid | 41.38 | 37.11 |
| VIT_12s0142g00310.t01 | Wine grape | endoplasmic reticulum, extracellular | 47.13 | 35.81 |
| Zm00001d002993_P001 | Maize | plastid | 37.93 | 35.48 |
| TraesCS2A01G378700.1 | Wheat | plastid | 42.53 | 33.48 |
| AT2G01918.1 | Thale cress | plastid | 35.06 | 32.62 |
| KRH30742 | Soybean | plastid | 35.63 | 30.69 |
| CDY58679 | Canola | plastid | 32.18 | 29.79 |
| HORVU2Hr1G090100.1 | Barley | plastid | 33.33 | 27.23 |
| KXG26739 | Sorghum | plastid | 42.53 | 24.18 |
| PGSC0003DMT400055931 | Potato | cytosol, extracellular, plastid | 21.26 | 16.09 |
| Bra039759.1-P | Field mustard | plastid | 31.61 | 15.45 |
| CDY16443 | Canola | plastid | 28.74 | 14.01 |
Protein Annotations
| Gene3D:1.20.120.290 | EntrezGene:102590174 | MapMan:35.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005509 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009523 | GO:GO:0009579 | GO:GO:0009654 | GO:GO:0009987 | GO:GO:0015979 | GO:GO:0016020 |
| GO:GO:0019898 | UniProt:M1CAN7 | PFAM:PF05757 | EnsemblPlantsGene:PGSC0003DMG400024679 | PGSC:PGSC0003DMG400024679 | EnsemblPlants:PGSC0003DMT400063427 |
| InterPro:PSII_PsbQ | PANTHER:PTHR33399 | PANTHER:PTHR33399:SF6 | InterPro:PsbQ-like_dom_sf | SUPFAM:SSF101112 | UniParc:UPI000294AA8E |
| RefSeq:XP_006345209.2 | : | : | : | : | : |
Description
Calcium ion binding protein [Source:PGSC_GENE;Acc:PGSC0003DMG400024679]
Coordinates
chr3:+:54987489..54988223
Molecular Weight (calculated)
20046.4 Da
IEP (calculated)
9.702
GRAVY (calculated)
-0.399
Length
174 amino acids
Sequence
(BLAST)
(BLAST)
001: MALLPLVQKP LTPFPSSNFS NKPKHKTQMS LNFTRRTTLI LCPTISINLL SEQQNANAFD FRITVPDQTL EEAEDGIQNH AKNLLQVKEL FEGESWKEGQ
101: KALRKSSALL KQDMYTIIQA KPGKQRPELR KMYSILFNYV TTMDFAARDK DVPRVWECYD NIVIALNNLM SRLL
101: KALRKSSALL KQDMYTIIQA KPGKQRPELR KMYSILFNYV TTMDFAARDK DVPRVWECYD NIVIALNNLM SRLL
001: MAISKPPPLH FTFFHNQDSS IDTSDSNLAL SIDTSRRRRD VLLTISGTLI PQLFFFDRKR SSSANAADFF NFGAPPPEPE RTVELAQEGL RKNAENIKRI
101: KEIMIEKKLW KEGGKELRRS ASNMKQDFYL IIQAKPPKDR PLFRSLYSSL FNSITKMDYA ARDGDETKVL EYYINIVAIL DDIFPRI
101: KEIMIEKKLW KEGGKELRRS ASNMKQDFYL IIQAKPPKDR PLFRSLYSSL FNSITKMDYA ARDGDETKVL EYYINIVAIL DDIFPRI
Arabidopsis Description
PQL3PsbQ-like protein 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q2V4B2]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.