Factsheet for Zm00001d002993_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

plastid: 20089766
plastid: 22065420
plastid: 23198870

msms PMID: 20089766 doi

G Friso, W Majeran, M Huang, Q Sun, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.

msms PMID: 23198870 doi

M Huang, G Friso, K Nishimura, X Qu, PD Olinares, W Majeran, Q Sun, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, United States.

msms PMID: 22065420 doi

W Majeran, G Friso, Y Asakura, X Qu, M Huang, L Ponnala, KP Watkins, A Barkan, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os04t0523000-00	Rice	plastid	55.91	56.22
TraesCS2B01G395700.1	Wheat	plastid	56.45	54.97
TraesCS2D01G374900.1	Wheat	plastid	55.38	53.09
TraesCS2A01G378700.1	Wheat	plastid	57.53	48.42
KXG26739	Sorghum	plastid	73.12	44.44
GSMUA_Achr1P02890_001	Banana	plastid	44.09	44.32
HORVU2Hr1G090100.1	Barley	plastid	44.62	38.97
PGSC0003DMT400063427	Potato	plastid	35.48	37.93
KRG98043	Soybean	plastid	32.26	32.26
AT2G01918.1	Thale cress	plastid	31.18	31.02
CDY58679	Canola	plastid	30.11	29.79
VIT_12s0142g00310.t01	Wine grape	endoplasmic reticulum, extracellular	36.02	29.26
KRH30742	Soybean	plastid	25.81	23.76
Zm00001d006540_P001	Maize	plastid	25.81	22.22
Zm00001d021703_P001	Maize	plastid	24.19	20.74
Bra039759.1-P	Field mustard	plastid	29.03	15.17
CDY16443	Canola	plastid	29.03	15.13

Protein Annotations

Gene3D:1.20.120.290	EntrezGene:103646199	MapMan:35.1	UniProt:A0A1D6E5W5	GO:GO:0003674	GO:GO:0005488
GO:GO:0005509	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0008150	GO:GO:0008152
GO:GO:0009523	GO:GO:0009579	GO:GO:0009654	GO:GO:0009987	GO:GO:0015979	GO:GO:0016020
GO:GO:0019898	ProteinID:ONM15856.1	PFAM:PF05757	InterPro:PSII_PsbQ	PANTHER:PTHR33399	PANTHER:PTHR33399:SF6
InterPro:PsbQ-like_dom_sf	SUPFAM:SSF101112	SignalP:SignalP-noTM	UniParc:UPI000221C877	EnsemblPlantsGene:Zm00001d002993	EnsemblPlants:Zm00001d002993_P001
EnsemblPlants:Zm00001d002993_T001	SEG:seg	:	:	:	:

Description

Oxygen-evolving enhancer protein 3

Coordinates

chr2:-:28976470..28977417

Molecular Weight (calculated)

20163.0 Da

IEP (calculated)

10.441

GRAVY (calculated)

-0.206

Length

186 amino acids

Sequence
(BLAST)

001: MASRLAVQAL SASLLSLAET TSPKPPKQQS QRPRAASSSS SSRRRLAATA GAIILASQLL PPVASSAAGT FDLQLMLPEK SSEEAEAVVR IHARNLLGVK
101: RFIDAGAWRE LQAALRSNAS NLKQDLYAII QARPTGQRSE LRRLYSDLFN SVTSLDYAAR DKDALQVQEH YGNIVSALDE IFSKIT

Best Arabidopsis Sequence Match ( AT2G01918.1 )
(BLAST)

001: MAISKPPPLH FTFFHNQDSS IDTSDSNLAL SIDTSRRRRD VLLTISGTLI PQLFFFDRKR SSSANAADFF NFGAPPPEPE RTVELAQEGL RKNAENIKRI
101: KEIMIEKKLW KEGGKELRRS ASNMKQDFYL IIQAKPPKDR PLFRSLYSSL FNSITKMDYA ARDGDETKVL EYYINIVAIL DDIFPRI

Arabidopsis Description

PQL3PsbQ-like protein 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q2V4B2]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.