Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G395700.1 | Wheat | plastid | 71.36 | 79.58 |
| TraesCS2D01G374900.1 | Wheat | plastid | 70.42 | 77.32 |
| TraesCS2A01G378700.1 | Wheat | plastid | 69.95 | 67.42 |
| Os04t0523000-00 | Rice | plastid | 39.91 | 45.95 |
| Zm00001d002993_P001 | Maize | plastid | 38.97 | 44.62 |
| GSMUA_Achr1P02890_001 | Banana | plastid | 30.52 | 35.14 |
| PGSC0003DMT400063427 | Potato | plastid | 27.23 | 33.33 |
| KXG26739 | Sorghum | plastid | 40.38 | 28.1 |
| KRG98043 | Soybean | plastid | 23.94 | 27.42 |
| KRH30742 | Soybean | plastid | 25.82 | 27.23 |
| AT2G01918.1 | Thale cress | plastid | 20.66 | 23.53 |
| CDY58679 | Canola | plastid | 20.66 | 23.4 |
| VIT_12s0142g00310.t01 | Wine grape | endoplasmic reticulum, extracellular | 24.41 | 22.71 |
| CDY16443 | Canola | plastid | 22.54 | 13.45 |
| HORVU2Hr1G043960.1 | Barley | mitochondrion | 15.49 | 12.79 |
| Bra039759.1-P | Field mustard | plastid | 21.13 | 12.64 |
| HORVU0Hr1G003270.1 | Barley | cytosol | 16.43 | 12.32 |
Protein Annotations
| Gene3D:1.20.120.290 | MapMan:35.2 | UniProt:A0A287IVX8 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005509 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009523 |
| GO:GO:0009579 | GO:GO:0009654 | GO:GO:0009987 | GO:GO:0015979 | GO:GO:0016020 | GO:GO:0019898 |
| EnsemblPlantsGene:HORVU2Hr1G090100 | EnsemblPlants:HORVU2Hr1G090100.1 | PFAM:PF05757 | InterPro:PSII_PsbQ | PANTHER:PTHR33399 | PANTHER:PTHR33399:SF6 |
| InterPro:PsbQ-like_dom_sf | SUPFAM:SSF101112 | SignalP:SignalP-noTM | UniParc:UPI000B46E0C7 | SEG:seg | : |
Description
No Description!
Coordinates
chrchr2H:-:641839697..641844878
Molecular Weight (calculated)
23091.6 Da
IEP (calculated)
10.982
GRAVY (calculated)
-0.343
Length
213 amino acids
Sequence
(BLAST)
(BLAST)
001: NKIPPRWKDS TMAMALQLAI QSLAASLSRS PNKPTKKPPS NGHHHPQEPT STTTSSSSGR RSLAVAAAAV GTALFASQLL PPTAGIAGAF DLDLRITIPE
101: QSSEEAEAVV RTHARNLVRV KQYIDARSWR ELQTALRASA ANLKQDLYAI IQARPPGQRP ELRRLYSDLF NNVTRVGDHK QINLSFEPLA LPMARSHFSA
201: VVCAAGLCGQ RQG
101: QSSEEAEAVV RTHARNLVRV KQYIDARSWR ELQTALRASA ANLKQDLYAI IQARPPGQRP ELRRLYSDLF NNVTRVGDHK QINLSFEPLA LPMARSHFSA
201: VVCAAGLCGQ RQG
001: MAISKPPPLH FTFFHNQDSS IDTSDSNLAL SIDTSRRRRD VLLTISGTLI PQLFFFDRKR SSSANAADFF NFGAPPPEPE RTVELAQEGL RKNAENIKRI
101: KEIMIEKKLW KEGGKELRRS ASNMKQDFYL IIQAKPPKDR PLFRSLYSSL FNSITKMDYA ARDGDETKVL EYYINIVAIL DDIFPRI
101: KEIMIEKKLW KEGGKELRRS ASNMKQDFYL IIQAKPPKDR PLFRSLYSSL FNSITKMDYA ARDGDETKVL EYYINIVAIL DDIFPRI
Arabidopsis Description
PQL3PsbQ-like protein 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q2V4B2]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.