Factsheet for HORVU2Hr1G043960.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

cytosol 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
Predotar:	mitochondrion
TargetP:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G220800.1	Wheat	plastid	63.95	77.1
TraesCS2B01G240000.1	Wheat	plastid	63.95	77.1
TraesCS2A01G215000.1	Wheat	plastid	63.95	77.1
EER97341	Sorghum	plastid	50.39	59.63
Zm00001d006540_P001	Maize	plastid	49.61	59.26
Zm00001d021703_P001	Maize	plastid	49.22	58.53
HORVU0Hr1G003270.1	Barley	cytosol	64.34	58.45
Os07t0544800-01	Rice	extracellular, plastid	48.84	58.06
CDY46373	Canola	plastid	44.19	52.29
AT4G21280.2	Thale cress	plastid	43.8	50.45
Bra029563.1-P	Field mustard	plastid	44.19	50.44
CDY39157	Canola	plastid	43.8	50.0
CDX79052	Canola	plastid	43.41	49.34
Bra013517.1-P	Field mustard	plastid	43.41	49.34
VIT_00s0904g00010.t01	Wine grape	plastid	43.8	48.92
CDX82819	Canola	plastid	43.02	48.9
GSMUA_Achr4P23940_001	Banana	plastid	44.57	48.73
AT4G05180.1	Thale cress	plastid	42.25	47.39
PGSC0003DMT400055931	Potato	cytosol, extracellular, plastid	41.86	46.96
Solyc02g079950.2.1	Tomato	plastid	41.47	46.52
KRH48778	Soybean	nucleus, plastid	42.25	46.19
KRH66566	Soybean	nucleus, plastid	41.47	46.12
CDX82816	Canola	cytosol, peroxisome, plastid	18.99	45.37
KRG94557	Soybean	plastid	17.44	30.2
HORVU2Hr1G090100.1	Barley	plastid	12.79	15.49

Protein Annotations

MapMan:1.1.1.2.2.2.2	Gene3D:1.20.120.290	UniProt:A0A287HUJ6	GO:GO:0003674	GO:GO:0005488	GO:GO:0005509
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0008150	GO:GO:0008152	GO:GO:0009523
GO:GO:0009579	GO:GO:0009654	GO:GO:0009987	GO:GO:0015979	GO:GO:0016020	GO:GO:0019898
EnsemblPlantsGene:HORVU2Hr1G043960	EnsemblPlants:HORVU2Hr1G043960.1	PFAM:PF05757	InterPro:PSII_PsbQ	PANTHER:PTHR33399	PANTHER:PTHR33399:SF3
InterPro:PsbQ-like_dom_sf	SUPFAM:SSF101112	UniParc:UPI000B477CFE	SEG:seg	:	:

Description

No Description!

Coordinates

chrchr2H:+:227826906..227827968

Molecular Weight (calculated)

21211.8 Da

IEP (calculated)

10.101

GRAVY (calculated)

-0.217

Length

258 amino acids

Sequence
(BLAST)

001: MEVRRCSIPQ ARATRRARIG LELIQSDKXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXVLGLMASG
101: VVGSAFAQVV HAGTVAAIKV GPPPPLSGGL PGTDNSDEAR DFDLPLKNRF YLQPLPPAQA AVRAQDILNL KPLIDKKQWP YVMNDLRLRA SYLRYDLKTV
201: ISSKTTKEEK KDLKDLTGKL FATLDGLDHA AKIKSPTEAE KYYGETKTVL GDVLAKLG

Best Arabidopsis Sequence Match ( AT4G21280.1 )
(BLAST)

001: MASMGGLHGA SPAVLEGSLK INGSSRLNGS GRVAVAQRSR LVVRAQQSEE TSRRSVIGLV AAGLAGGSFV QAVLADAISI KVGPPPAPSG GLPGTDNSDQ
101: ARDFALALKD RFYLQPLPPT EAAARAKESA KDIINVKPLI DRKAWPYVQN DLRSKASYLR YDLNTIISSK PKDEKKSLKD LTTKLFDTID NLDYAAKKKS
201: PSQAEKYYAE TVSALNEVLA KLG

Arabidopsis Description

PSBQ1Oxygen-evolving enhancer protein 3-1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9XFT3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.