Factsheet for AT4G05180.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY39157	Canola	plastid	89.13	90.71
Bra029563.1-P	Field mustard	plastid	88.7	90.27
CDY46373	Canola	plastid	79.57	83.94
AT4G21280.2	Thale cress	plastid	75.22	77.23
VIT_00s0904g00010.t01	Wine grape	plastid	69.13	68.83
KRH66566	Soybean	nucleus, plastid	69.13	68.53
KRH48778	Soybean	nucleus, plastid	70.0	68.22
PGSC0003DMT400055931	Potato	cytosol, extracellular, plastid	66.52	66.52
Solyc02g079950.2.1	Tomato	plastid	66.52	66.52
GSMUA_Achr9P24750_001	Banana	plasma membrane, plastid	61.3	66.51
GSMUA_Achr4P23940_001	Banana	plastid	66.09	64.41
Zm00001d021703_P001	Maize	plastid	57.39	60.83
EER97341	Sorghum	plastid	56.96	60.09
Zm00001d006540_P001	Maize	plastid	56.09	59.72
Os07t0544800-01	Rice	extracellular, plastid	55.65	58.99
TraesCS2A01G215000.1	Wheat	plastid	53.48	57.48
TraesCS2B01G240000.1	Wheat	plastid	53.48	57.48
TraesCS2D01G220800.1	Wheat	plastid	53.48	57.48
KRG94557	Soybean	plastid	35.22	54.36
HORVU2Hr1G043960.1	Barley	mitochondrion	47.39	42.25
HORVU0Hr1G003270.1	Barley	cytosol	51.3	41.55
AT2G01918.1	Thale cress	plastid	16.96	20.86

Protein Annotations

MapMan:1.1.1.2.2.2.2	Gene3D:1.20.120.290	EntrezGene:825866	UniProt:A0A178UX57	ProteinID:AEE82488.1	EMBL:AF372897
ProteinID:ANM66257.1	ArrayExpress:AT4G05180	EnsemblPlantsGene:AT4G05180	RefSeq:AT4G05180	TAIR:AT4G05180	RefSeq:AT4G05180-TAIR-G
EnsemblPlants:AT4G05180.1	TAIR:AT4G05180.1	EMBL:AY088008	Unigene:At.21853	EMBL:BT000648	ProteinID:CAB81060.1
GO:GO:0003674	GO:GO:0005488	GO:GO:0005509	GO:GO:0005515	GO:GO:0005575	GO:GO:0005576
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0008152	GO:GO:0009507
GO:GO:0009523	GO:GO:0009534	GO:GO:0009535	GO:GO:0009536	GO:GO:0009570	GO:GO:0009579
GO:GO:0009654	GO:GO:0009987	GO:GO:0015979	GO:GO:0016020	GO:GO:0019898	GO:GO:0031977
GO:GO:0048046	RefSeq:NP_001319873.1	RefSeq:NP_192427.1	ProteinID:OAO97674.1	PFAM:PF05757	PO:PO:0000013
PO:PO:0000037	PO:PO:0000230	PO:PO:0000293	PO:PO:0001054	PO:PO:0001078	PO:PO:0001081
PO:PO:0001185	PO:PO:0004507	PO:PO:0006339	PO:PO:0007064	PO:PO:0007095	PO:PO:0007098
PO:PO:0007103	PO:PO:0007115	PO:PO:0007123	PO:PO:0007131	PO:PO:0007611	PO:PO:0007616
PO:PO:0008019	PO:PO:0009001	PO:PO:0009006	PO:PO:0009009	PO:PO:0009010	PO:PO:0009025
PO:PO:0009029	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009047
PO:PO:0009052	PO:PO:0020030	PO:PO:0020038	PO:PO:0020100	PO:PO:0020137	PO:PO:0025022
PO:PO:0025281	Symbol:PSBQ	InterPro:PSII_PsbQ	PANTHER:PTHR33399	PANTHER:PTHR33399:SF3	InterPro:PsbQ-like_dom_sf
UniProt:Q41932	SUPFAM:SSF101112	UniParc:UPI0000000AC1	EMBL:Z17777	SEG:seg	:

Description

PSBQ2Oxygen-evolving enhancer protein 3-2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q41932]

Coordinates

chr4:-:2671523..2673243

Molecular Weight (calculated)

24644.4 Da

IEP (calculated)

10.281

GRAVY (calculated)

-0.240

Length

230 amino acids

Sequence
(BLAST)

001: MAQAVTSMAG LRGASQAVLE GSLQINGSNR LNISRVSVGS QRTGLVIRAQ QNVSVPESSR RSVIGLVAAG LAGGSFVKAV FAEAIPIKVG GPPLPSGGLP
101: GTDNSDQARD FSLALKDRFY IQPLSPTEAA ARAKDSAKEI INVKSFIDKK AWPYVQNDLR LRASYLRYDL NTVISAKPKE EKQSLKDLTA KLFQTIDNLD
201: YAARSKSSPD AEKYYSETVS SLNNVLAKLG

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.