Factsheet for Os07t0544800-01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, plastid

Predictor Summary:

nucleus 1
plastid 9

Predictors

GFP

MS/MS

Papers

nucleus: 19621931
plastid: 21433289
extracellular: 23159799
plasma membrane: 27800704
extracellular: 28232208

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

msms PMID: 23159799 doi

SG Kim, Y Wang, KH Lee, ZY Park, J Park, J Wu, SJ Kwon, YH Lee, GK Agrawal, R Rakwal, ST Kim, KY Kang

Plant Molecular Biology and Biotechnology Research Center, Gyeongsang National University, Jinju, 660-701, South Korea.

msms PMID: 21433289 doi

S Reiland, J Grossmann, K Baerenfaller, P Gehrig, A Nunes-Nesi, AR Fernie, W Gruissem, S Baginsky

Department of Biology, Plant Biotechnology, ETH Zurich, Zurich, Switzerland.

msms PMID: 19621931 doi

T Aki, S Yanagisawa

Department of Applied Biological Chemistry, The University of Tokyo, Japan.

msms PMID: 28232208 doi

Y Wang, R Gupta, W Song, HH Huh, SE Lee, J Wu, GK Agrawal, R Rakwal, KY Kang, SR Park, ST Kim

Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang 627-707, South Korea., Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang 627-707, South Korea. Electronic address: stkim71@pusan.ac.kr., Department of Plant Microbe Interactions, Max Planck Institute for Plant Breeding Research, Carl-von-Linneweg 10, Cologne 50829, Germany., Division of Applied Life Science (BK21 Program), Gyeongsang National University, Jinju, South Korea., National Academy of Agricultural Science, Rural Development Administration, Suwon 441-707, South Korea. Electronic address: srpark@korea.kr., Plant Proteomics Group, Max Planck Institute for Plant Breeding Research, Carl-von-Linneweg 10, Cologne 50829, Germany., Research Laboratory for Biotechnology and Biochemistry (RLABB), GPO 13265, Kathmandu 44600, Nepal; GRADE (Global Research Arch for Developing Education) Academy, Pvt. Ltd, Adarsh Nagar-13, Birgunj 44300, Nepal., Research Laboratory for Biotechnology and Biochemistry (RLABB), GPO 13265, Kathmandu 44600, Nepal; GRADE (Global Research Arch for Developing Education) Academy, Pvt. Ltd, Adarsh Nagar-13, Birgunj 44300, Nepal; Faculty of Health and Sport Sciences, Tsukuba International Academy for Sport Studies (TIAS), University of Tsukuba, 1-1-1 Tennodai, Tsukuba, 305-8574, Ibaraki, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d021703_P001	Maize	plastid	74.65	74.65
Zm00001d006540_P001	Maize	plastid	72.81	73.15
EER97341	Sorghum	plastid	70.97	70.64
TraesCS2B01G240000.1	Wheat	plastid	69.59	70.56
TraesCS2A01G215000.1	Wheat	plastid	69.59	70.56
TraesCS2D01G220800.1	Wheat	plastid	69.12	70.09
AT4G21280.2	Thale cress	plastid	64.06	62.05
VIT_00s0904g00010.t01	Wine grape	plastid	64.52	60.61
GSMUA_Achr4P23940_001	Banana	plastid	65.9	60.59
Bra013517.1-P	Field mustard	plastid	63.13	60.35
CDX79052	Canola	plastid	63.13	60.35
KRH66566	Soybean	nucleus, plastid	64.52	60.34
CDX82816	Canola	cytosol, peroxisome, plastid	29.95	60.19
CDX82819	Canola	plastid	62.67	59.91
KRH48778	Soybean	nucleus, plastid	64.98	59.75
CDY46373	Canola	plastid	59.45	59.17
Bra029563.1-P	Field mustard	plastid	59.91	57.52
CDY39157	Canola	plastid	59.45	57.08
AT4G05180.1	Thale cress	plastid	58.99	55.65
Solyc02g079950.2.1	Tomato	plastid	58.06	54.78
PGSC0003DMT400055931	Potato	cytosol, extracellular, plastid	57.6	54.35
HORVU2Hr1G043960.1	Barley	mitochondrion	58.06	48.84
HORVU0Hr1G003270.1	Barley	cytosol	63.13	48.24
KRG94557	Soybean	plastid	32.72	47.65
Os04t0523000-00	Rice	plastid	21.2	24.86

Protein Annotations

MapMan:1.1.1.2.2.2.2	Gene3D:1.20.120.290	EntrezGene:4343515	EMBL:AK069170	EMBL:AK099127	ProteinID:BAC83128.1
ProteinID:BAF21825.1	ProteinID:BAT01995.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005509	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0008152	GO:GO:0009507
GO:GO:0009523	GO:GO:0009535	GO:GO:0009536	GO:GO:0009579	GO:GO:0009654	GO:GO:0009987
GO:GO:0015979	GO:GO:0016020	GO:GO:0019898	EnsemblPlantsGene:Os07g0544800	EnsemblPlants:Os07t0544800-01	PFAM:PF05757
InterPro:PSII_PsbQ	PANTHER:PTHR33399	PANTHER:PTHR33399:SF3	InterPro:PsbQ-like_dom_sf	UniProt:Q0D5P8	SUPFAM:SSF101112
UniParc:UPI000043DEF4	RefSeq:XP_015646577.1	SEG:seg	:	:	:

Description

Similar to Oxygen-evolving enhancer protein 3-2, chloroplast precursor (OEE3) (16 kDa subunit of oxygen evolving system of photosystem II) (OEC 16 kDa subunit) (Ferredoxin-NADP reductase binding protein) (BP). (Os07t0544800-01)

Coordinates

chr7:+:21574446..21576033

Molecular Weight (calculated)

22982.9 Da

IEP (calculated)

10.439

GRAVY (calculated)

-0.292

Length

217 amino acids

Sequence
(BLAST)

001: MAQAMASMTG LSQGVQLPAG PRRAGGRSRL AVVRADAAAA DVQTGRRAVL GLVATGIAGG ALAQAALAEA AKPIKLGPPP PPSGGLPGTL NSDQARDTDL
101: PLRERFYLQP LPPAEAAARA KESAQDIINL KPLIEKKQWP FVRDDLRLRA SYLRYDLKTV INSKPKDEKK GLKDLTGKLF ATIDGLDHAA KIKSPEEAEK
201: YYTLTKSALG DVLAKLG

Best Arabidopsis Sequence Match ( AT4G21280.1 )
(BLAST)

001: MASMGGLHGA SPAVLEGSLK INGSSRLNGS GRVAVAQRSR LVVRAQQSEE TSRRSVIGLV AAGLAGGSFV QAVLADAISI KVGPPPAPSG GLPGTDNSDQ
101: ARDFALALKD RFYLQPLPPT EAAARAKESA KDIINVKPLI DRKAWPYVQN DLRSKASYLR YDLNTIISSK PKDEKKSLKD LTTKLFDTID NLDYAAKKKS
201: PSQAEKYYAE TVSALNEVLA KLG

Arabidopsis Description

PSBQ1Oxygen-evolving enhancer protein 3-1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9XFT3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.