Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- mitochondrion 2
- cytosol 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS2D01G374900.1 | Wheat | plastid | 80.54 | 91.75 |
TraesCS2B01G395700.1 | Wheat | plastid | 78.73 | 91.1 |
HORVU2Hr1G090100.1 | Barley | plastid | 67.42 | 69.95 |
Zm00001d002993_P001 | Maize | plastid | 48.42 | 57.53 |
Os04t0523000-00 | Rice | plastid | 47.51 | 56.76 |
GSMUA_Achr1P02890_001 | Banana | plastid | 39.82 | 47.57 |
PGSC0003DMT400063427 | Potato | plastid | 33.48 | 42.53 |
KXG26739 | Sorghum | plastid | 51.13 | 36.93 |
KRG98043 | Soybean | plastid | 30.77 | 36.56 |
AT2G01918.1 | Thale cress | plastid | 28.51 | 33.69 |
CDY58679 | Canola | plastid | 28.05 | 32.98 |
VIT_12s0142g00310.t01 | Wine grape | endoplasmic reticulum, extracellular | 31.22 | 30.13 |
KRH30742 | Soybean | plastid | 23.08 | 25.25 |
TraesCS2A01G215000.1 | Wheat | plastid | 19.0 | 19.63 |
CDY16443 | Canola | plastid | 26.24 | 16.25 |
Bra039759.1-P | Field mustard | plastid | 25.79 | 16.01 |
Protein Annotations
Gene3D:1.20.120.290 | MapMan:35.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005509 | GO:GO:0005575 |
GO:GO:0005622 | GO:GO:0005623 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009523 | GO:GO:0009579 |
GO:GO:0009654 | GO:GO:0009987 | GO:GO:0015979 | GO:GO:0016020 | GO:GO:0019898 | PFAM:PF05757 |
InterPro:PSII_PsbQ | PANTHER:PTHR33399 | PANTHER:PTHR33399:SF6 | InterPro:PsbQ-like_dom_sf | SUPFAM:SSF101112 | EnsemblPlantsGene:TraesCS2A01G378700 |
EnsemblPlants:TraesCS2A01G378700.1 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr2A:-:621481915..621482668
Molecular Weight (calculated)
24300.2 Da
IEP (calculated)
10.307
GRAVY (calculated)
-0.309
Length
221 amino acids
Sequence
(BLAST)
(BLAST)
001: MATMLCVPEP MENRTRFHQR WKGSAMAMAL QLAIQSLAAS LFRSPNKPAT KPPSNGHRHP QEPTGSSRCS GRRSLAAAAA AAAVGTALLA SQLLPPTAGI
101: AGAFDLDLRI TIPEQSSEEA EAVVRTHARN LVRVKQFIDA RSWRELQTAL RASAANLKQD LYAIIQARPP GQRPELRRLY SDLFNNVTRL DYAARDKDEP
201: QVQECYGNIV AAIDQIFARI M
101: AGAFDLDLRI TIPEQSSEEA EAVVRTHARN LVRVKQFIDA RSWRELQTAL RASAANLKQD LYAIIQARPP GQRPELRRLY SDLFNNVTRL DYAARDKDEP
201: QVQECYGNIV AAIDQIFARI M
001: MAISKPPPLH FTFFHNQDSS IDTSDSNLAL SIDTSRRRRD VLLTISGTLI PQLFFFDRKR SSSANAADFF NFGAPPPEPE RTVELAQEGL RKNAENIKRI
101: KEIMIEKKLW KEGGKELRRS ASNMKQDFYL IIQAKPPKDR PLFRSLYSSL FNSITKMDYA ARDGDETKVL EYYINIVAIL DDIFPRI
101: KEIMIEKKLW KEGGKELRRS ASNMKQDFYL IIQAKPPKDR PLFRSLYSSL FNSITKMDYA ARDGDETKVL EYYINIVAIL DDIFPRI
Arabidopsis Description
PQL3PsbQ-like protein 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q2V4B2]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.