Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX68503 | Canola | nucleus | 21.35 | 53.25 |
| CDY64711 | Canola | cytosol | 52.08 | 34.25 |
| GSMUA_Achr2P01550_001 | Banana | cytosol | 47.92 | 24.8 |
| KRG93140 | Soybean | plastid | 56.77 | 20.68 |
| VIT_17s0000g00390.t01 | Wine grape | mitochondrion, plastid | 61.46 | 20.67 |
| KRH36369 | Soybean | nucleus, plastid | 56.77 | 20.6 |
| GSMUA_Achr4P00070_001 | Banana | plastid | 55.73 | 20.54 |
| VIT_01s0244g00070.t01 | Wine grape | nucleus, plastid | 56.25 | 19.53 |
| Solyc03g118390.2.1 | Tomato | nucleus | 57.29 | 19.4 |
| KRH63847 | Soybean | endoplasmic reticulum, nucleus | 56.25 | 18.75 |
| KRH54118 | Soybean | endoplasmic reticulum | 55.73 | 18.58 |
| Bra009703.1-P | Field mustard | mitochondrion | 46.88 | 17.86 |
| AT5G13260.1 | Thale cress | plastid | 48.96 | 17.5 |
| CDY05877 | Canola | nucleus, plastid | 51.56 | 17.46 |
| CDX88044 | Canola | mitochondrion | 48.44 | 17.16 |
| Bra018031.1-P | Field mustard | mitochondrion | 51.56 | 17.01 |
| CDY09779 | Canola | nucleus, plastid | 47.4 | 16.91 |
| Bra008842.1-P | Field mustard | nucleus, plastid | 47.4 | 16.88 |
| CDX69654 | Canola | nucleus, plastid | 47.4 | 16.82 |
| CDX80382 | Canola | mitochondrion | 47.4 | 16.76 |
| AT3G48860.2 | Thale cress | nucleus | 50.0 | 16.64 |
| AT5G23700.3 | Thale cress | mitochondrion, plastid | 47.4 | 15.74 |
| CDY03383 | Canola | nucleus, plastid | 45.83 | 13.48 |
| CDY34338 | Canola | nucleus, plastid | 45.31 | 13.36 |
| HORVU4Hr1G023390.10 | Barley | cytosol, nucleus | 50.0 | 13.3 |
| TraesCS4D01G120700.1 | Wheat | nucleus | 49.48 | 12.72 |
| Zm00001d049273_P001 | Maize | nucleus | 46.88 | 12.59 |
| Bra013860.1-P | Field mustard | nucleus, plastid | 45.31 | 12.46 |
| TraesCS4A01G192600.1 | Wheat | nucleus | 50.0 | 12.37 |
| TraesCS4B01G122700.1 | Wheat | nucleus | 49.48 | 12.18 |
| AT4G25070.2 | Thale cress | plastid | 46.88 | 11.73 |
| Os11t0520500-00 | Rice | plasma membrane | 40.62 | 11.27 |
| EES08547 | Sorghum | nucleus | 47.4 | 10.96 |
| CDY70607 | Canola | nucleus | 2.6 | 2.14 |
| GSMUA_Achr9P01060_001 | Banana | plastid | 3.12 | 1.55 |
| Solyc05g023770.2.1 | Tomato | plastid | 3.12 | 1.51 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr9P01070_001 | EnsemblPlants:GSMUA_Achr9T01070_001 | EnsemblPlantsGene:GSMUA_Achr9G01070_001 | PANTHER:PTHR31762 | UniParc:UPI0002956440 | UniProt:M0TWG4 |
| MapMan:22.5.7.1.2 | : | : | : | : | : |
Description
expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr9G01070_001]
Coordinates
chr9:+:811056..815806
Molecular Weight (calculated)
22362.3 Da
IEP (calculated)
4.479
GRAVY (calculated)
-0.666
Length
192 amino acids
Sequence
(BLAST)
(BLAST)
001: MRATSITDHD IPMTLYIHNL LCYDDTDRRN QLDRDISDIT AEGNIENMLA VEKGLRELAS LKVEDAIMLV LAQHRRPNLI RQSASDLRSP GDPKWDEFEL
101: SQEEAEDVLF KQSWLTYFWR RAKTHGIEED IAEEHLRFWI GRMGQPPTSH DVVDVERGLI ELRKLGIEQQ LWEACRMEFD ANQKPEADAE NS
101: SQEEAEDVLF KQSWLTYFWR RAKTHGIEED IAEEHLRFWI GRMGQPPTSH DVVDVERGLI ELRKLGIEQQ LWEACRMEFD ANQKPEADAE NS
001: MARRPGTSAS SSPTMSPSHR MSGGGGGISG KSTLRKQNAA ELLAKVMEKR EYDYDYDDED GGEDLYQVHL PPLTQSRRRD DKRIGKGSVN EKKAPAKKPI
101: ILPAPKFDDE SEDDETRANF RPNPVIIPKK NAREPRKAPA TKPVVLPPPK FSNVRRIPVE ISGRNARGSK EASTVKQVVS TPKFDDEYDS DEITEDVPRN
201: PVEIRGPVRG KVAPAVKPVV VLPTKFDDEY DSDEITEDVP RNPVEIRGTV RGKVAPAVKP VVVLPTKFDD EYDSDEITAD VSRNPVEVRD PVRGKLAPVV
301: KPVVLPTKFD DEYDSDEIAA DVSRKAVEIP QKNEKSTLRV RVPAYSRRNP LEEFEQNGED KQNVQCDVPA KQSEAQLKYK KRYHPANILA PNNSNQQEDD
401: REASALRDEL DMLQEENDNI MDKLQRAEER REAAEARAKE LEKQVASLGE GANFDVKLLK RKEAALRQRE AALRAAEQKR DGRNRETNAL SSEFQSLKDE
501: AEKSTEQLQE VEAEIKSLRT MIHRTILSQE EMEEVVLKRC WLARYWELAV QHGICEDIST SRYEHWSALA PLPSEVVLSA AQKSEDSWQT GGSDRTWSKV
601: ISNFSDLNGE GNIESMLAVE TGLREIASLK VEDAVMLALS RYRQTNVARQ AVTDPRVQGE PKFSETFELS HDEQQDILFK EAWLLYFWKR AKIHGVESDI
701: AEERLQFWIN RLGQHSSSHD AIDVERGMRE LRKLGIEQQL WETSRKELID SSFLPSYSVS DYNDE
101: ILPAPKFDDE SEDDETRANF RPNPVIIPKK NAREPRKAPA TKPVVLPPPK FSNVRRIPVE ISGRNARGSK EASTVKQVVS TPKFDDEYDS DEITEDVPRN
201: PVEIRGPVRG KVAPAVKPVV VLPTKFDDEY DSDEITEDVP RNPVEIRGTV RGKVAPAVKP VVVLPTKFDD EYDSDEITAD VSRNPVEVRD PVRGKLAPVV
301: KPVVLPTKFD DEYDSDEIAA DVSRKAVEIP QKNEKSTLRV RVPAYSRRNP LEEFEQNGED KQNVQCDVPA KQSEAQLKYK KRYHPANILA PNNSNQQEDD
401: REASALRDEL DMLQEENDNI MDKLQRAEER REAAEARAKE LEKQVASLGE GANFDVKLLK RKEAALRQRE AALRAAEQKR DGRNRETNAL SSEFQSLKDE
501: AEKSTEQLQE VEAEIKSLRT MIHRTILSQE EMEEVVLKRC WLARYWELAV QHGICEDIST SRYEHWSALA PLPSEVVLSA AQKSEDSWQT GGSDRTWSKV
601: ISNFSDLNGE GNIESMLAVE TGLREIASLK VEDAVMLALS RYRQTNVARQ AVTDPRVQGE PKFSETFELS HDEQQDILFK EAWLLYFWKR AKIHGVESDI
701: AEERLQFWIN RLGQHSSSHD AIDVERGMRE LRKLGIEQQL WETSRKELID SSFLPSYSVS DYNDE
Arabidopsis Description
Caldesmon-like protein [Source:UniProtKB/TrEMBL;Acc:A0MFT2]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.