Factsheet for AT5G13260.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX69654	Canola	nucleus, plastid	78.4	77.82
CDY09779	Canola	nucleus, plastid	77.84	77.7
Bra008842.1-P	Field mustard	nucleus, plastid	75.61	75.32
KRG93140	Soybean	plastid	62.57	63.76
VIT_01s0244g00070.t01	Wine grape	nucleus, plastid	62.94	61.12
KRH36369	Soybean	nucleus, plastid	59.03	59.92
Solyc05g023770.2.1	Tomato	plastid	39.48	53.4
GSMUA_Achr4P00070_001	Banana	plastid	51.21	52.78
EES04143	Sorghum	plastid	54.75	52.31
Os01t0928100-01	Rice	plasma membrane	53.82	50.7
TraesCS3A01G442300.2	Wheat	plastid	53.45	49.74
AT3G48860.2	Thale cress	nucleus	53.26	49.57
TraesCS3D01G435000.1	Wheat	plastid	53.26	49.57
TraesCS3B01G476100.1	Wheat	plastid	52.89	49.22
GSMUA_Achr9P01070_001	Banana	cytosol	17.5	48.96
GSMUA_Achr9P01060_001	Banana	plastid	35.2	48.84
HORVU3Hr1G096450.1	Barley	plastid	53.63	47.84
AT5G23700.3	Thale cress	mitochondrion, plastid	48.23	44.81
AT4G25070.2	Thale cress	plastid	43.95	30.77
HORVU4Hr1G023390.10	Barley	cytosol, nucleus	38.92	28.95
Zm00001d049273_P001	Maize	nucleus	37.99	28.53
TraesCS4A01G192600.1	Wheat	nucleus	40.22	27.84
TraesCS4D01G120700.1	Wheat	nucleus	38.55	27.71
Os11t0520500-00	Rice	plasma membrane	35.38	27.46
TraesCS4B01G122700.1	Wheat	nucleus	38.73	26.67
AT4G08630.1	Thale cress	plastid	38.55	25.88
EES08547	Sorghum	nucleus	39.48	25.54

Protein Annotations

MapMan:22.5.7.1.2	EntrezGene:831167	UniProt:A0A178UMR8	ProteinID:AED91872.1	EMBL:AK227377	ArrayExpress:AT5G13260
EnsemblPlantsGene:AT5G13260	RefSeq:AT5G13260	TAIR:AT5G13260	RefSeq:AT5G13260-TAIR-G	EnsemblPlants:AT5G13260.1	TAIR:AT5G13260.1
EMBL:AY064036	EMBL:AY113850	Unigene:At.27092	ncoils:Coil	GO:GO:0008150	RefSeq:NP_196830.2
ProteinID:OAO95118.1	PO:PO:0000293	PANTHER:PTHR31762	PANTHER:PTHR31762:SF5	UniProt:Q8VZL1	UniParc:UPI00000A402D
SEG:seg	:	:	:	:	:

Description

Myosin [Source:UniProtKB/TrEMBL;Acc:Q8VZL1]

Coordinates

chr5:+:4242896..4246882

Molecular Weight (calculated)

59719.0 Da

IEP (calculated)

5.816

GRAVY (calculated)

-0.687

Length

537 amino acids

Sequence
(BLAST)

001: MERARTESPS YFRQWSGDSG TTNAAAVAPS SPARHHHARS SSVTNMSNVK RAQNVAAKAA AQRLAKVMAS QTNNDDDDDD DDDEVGGDDL GFRYGAPPPL
101: SFTRNPSSTI AKPKPVASSA VVPPPKISRS SSPANSPAVS VRASQPPVPP SKLRNQTTNP LPVATPKTEK RVLADIGHFN GKDSKDQHEA SALRDELDML
201: QEENDSILEK LRLEDEKCKE AEARVRELEK QVTSLGEGVS LEAKLLSRKE AALRQREAAL KDARQNRDGT NRETTALRSQ VETAKLETAA IVAQLQGAES
301: EVNGLRTMTH RMILTQKEME EVVLKRCWLA RYWGLASRYG ICSDIATSKY EYWSSLAPLP FEIVLSAGQK AKEESWEKES EENEKRSQLV QDINDLTGEG
401: NIESMLSVEM GLKELTSLKV EVAITITLAQ LRLANTTRLS DIELKSPGGP KITETLELSQ EESEDVLFKE AWLTYFWRRA QSLGIEVDTA RERLRFWISR
501: SAHSPSSHDA MEVEQGLTEL RKLRIERRLW EASRSSQ

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.