CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 3
plastid 5
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH36369	Soybean	nucleus, plastid	85.01	84.69
VIT_01s0244g00070.t01	Wine grape	nucleus, plastid	73.62	70.16
AT5G13260.1	Thale cress	plastid	63.76	62.57
CDY09779	Canola	nucleus, plastid	62.43	61.15
CDX69654	Canola	nucleus, plastid	62.62	61.0
KRH54118	Soybean	endoplasmic reticulum	64.52	59.03
KRH63847	Soybean	endoplasmic reticulum, nucleus	64.33	58.85
Bra008842.1-P	Field mustard	nucleus, plastid	60.15	58.81
GSMUA_Achr4P00070_001	Banana	plastid	57.69	58.35
GSMUA_Achr9P01070_001	Banana	cytosol	20.68	56.77
EES04143	Sorghum	plastid	59.77	56.05
Solyc05g023770.2.1	Tomato	plastid	41.94	55.67
Os01t0928100-01	Rice	plasma membrane	59.2	54.74
TraesCS3A01G442300.2	Wheat	plastid	57.87	52.86
TraesCS3D01G435000.1	Wheat	plastid	57.69	52.69
TraesCS3B01G476100.1	Wheat	plastid	57.12	52.17
HORVU3Hr1G096450.1	Barley	plastid	58.06	50.83
GSMUA_Achr9P01060_001	Banana	plastid	36.81	50.13
KRG96906	Soybean	nucleus, plastid	46.87	38.65
KRH68645	Soybean	nucleus, plastid	46.87	37.65
HORVU4Hr1G023390.10	Barley	cytosol, nucleus	44.4	32.41
Zm00001d049273_P001	Maize	nucleus	43.83	32.31
TraesCS4D01G120700.1	Wheat	nucleus	44.78	31.59
Os11t0520500-00	Rice	plasma membrane	41.18	31.36
TraesCS4A01G192600.1	Wheat	nucleus	45.54	30.93
TraesCS4B01G122700.1	Wheat	nucleus	44.78	30.26
EES08547	Sorghum	nucleus	43.83	27.83

Protein Annotations

EMBL:ACUP02012781	EnsemblPlants:KRG93140	EnsemblPlantsGene:GLYMA_20G250000	EntrezGene:100779579	ncoils:Coil	PANTHER:PTHR31762
PANTHER:PTHR31762:SF5	ProteinID:KRG93140	ProteinID:KRG93140.1	SEG:seg	UniParc:UPI000233D900	UniProt:K7N5K3
MapMan:22.5.7.1.2	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr20:-:47860237..47884662

Molecular Weight (calculated)

58622.1 Da

IEP (calculated)

5.317

GRAVY (calculated)

-0.654

Length

527 amino acids

Sequence
(BLAST)

001: MERKWSSESG GNVISSPSHS RNGHSRSSSL TIPGGGISTV KRTQNVAAKA AAQRLAQVMA SQTADDDDDD EDDLGFRYTA PPPLSLSRSS ARSPSPALAR
101: NLVEESSMYL RPAPPAAGNN RPPLSLRTPA PVLPFDPPIH NNNKPKDKRF PFDAGLLQPK DSGDQREASA LRDEVDMLQE ENESILDKLR LEEERCKESE
201: ARVRELEKQV ASLGEGVSLE AKLLSRKEAA LRQREAALKN AKDSKDGVDK EITSLQAEIE NAKVETEAAV RQLNGAESEV KALRSMTQRM ILTQKEMEEV
301: VLKRCWLARY WGLAAKYGIC ADVAVSKYEL WSSLAPLPFE VVVSAGQKAK EECWEKGDDA TEKRSKLVPD LNDLTGEGNI ESMLSVEMGL KELASLKVED
401: AIVRALAQQR RPNSARQLVS DIKSPGDPKF MEAFELSPEE SEDVLFKEAW LTYFWRRAKA HGIEEDIAKE RLRFWIGRSG HSPTSHDAVD AEQGLSELRK
501: LGIEHRLWEA SRKEVDQDFT IARKLLT

Best Arabidopsis Sequence Match ( AT5G13260.1 )
(BLAST)

001: MERARTESPS YFRQWSGDSG TTNAAAVAPS SPARHHHARS SSVTNMSNVK RAQNVAAKAA AQRLAKVMAS QTNNDDDDDD DDDEVGGDDL GFRYGAPPPL
101: SFTRNPSSTI AKPKPVASSA VVPPPKISRS SSPANSPAVS VRASQPPVPP SKLRNQTTNP LPVATPKTEK RVLADIGHFN GKDSKDQHEA SALRDELDML
201: QEENDSILEK LRLEDEKCKE AEARVRELEK QVTSLGEGVS LEAKLLSRKE AALRQREAAL KDARQNRDGT NRETTALRSQ VETAKLETAA IVAQLQGAES
301: EVNGLRTMTH RMILTQKEME EVVLKRCWLA RYWGLASRYG ICSDIATSKY EYWSSLAPLP FEIVLSAGQK AKEESWEKES EENEKRSQLV QDINDLTGEG
401: NIESMLSVEM GLKELTSLKV EVAITITLAQ LRLANTTRLS DIELKSPGGP KITETLELSQ EESEDVLFKE AWLTYFWRRA QSLGIEVDTA RERLRFWISR
501: SAHSPSSHDA MEVEQGLTEL RKLRIERRLW EASRSSQ

Arabidopsis Description

Myosin [Source:UniProtKB/TrEMBL;Acc:Q8VZL1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.