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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 5
  • mitochondrion 1
  • cytosol 1
  • nucleus 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Os01t0928100-01 Rice plasma membrane 85.94 84.74
TraesCS3A01G442300.2 Wheat plastid 86.3 84.06
TraesCS3D01G435000.1 Wheat plastid 86.3 84.06
TraesCS3B01G476100.1 Wheat plastid 84.34 82.15
HORVU3Hr1G096450.1 Barley plastid 86.65 80.9
GSMUA_Achr4P00070_001 Banana plastid 63.52 68.52
VIT_17s0000g00390.t01 Wine grape mitochondrion, plastid 61.92 60.95
VIT_01s0244g00070.t01 Wine grape nucleus, plastid 59.25 60.22
KRG93140 Soybean plastid 56.05 59.77
KRH63847 Soybean endoplasmic reticulum, nucleus 61.21 59.72
KRH54118 Soybean endoplasmic reticulum 60.68 59.2
KRH36369 Soybean nucleus, plastid 55.16 58.6
CDY64711 Canola cytosol 29.72 57.19
Solyc03g118390.2.1 Tomato nucleus 56.23 55.73
CDY05877 Canola nucleus, plastid 56.23 55.73
AT3G48860.2 Thale cress nucleus 56.23 54.77
AT5G13260.1 Thale cress plastid 52.31 54.75
Bra018031.1-P Field mustard mitochondrion 55.87 53.95
AT5G23700.3 Thale cress mitochondrion, plastid 55.34 53.81
Solyc05g023770.2.1 Tomato plastid 37.72 53.4
CDY09779 Canola nucleus, plastid 51.07 53.35
CDX69654 Canola nucleus, plastid 51.07 53.05
Bra009703.1-P Field mustard mitochondrion 46.62 51.98
CDX68503 Canola nucleus 7.12 51.95
CDX80382 Canola mitochondrion 49.64 51.38
CDX88044 Canola mitochondrion 49.11 50.92
Bra008842.1-P Field mustard nucleus, plastid 48.75 50.83
CDY70607 Canola nucleus 16.01 38.46
CDY34338 Canola nucleus, plastid 42.7 36.87
CDY03383 Canola nucleus, plastid 42.35 36.45
KXG21299 Sorghum mitochondrion 35.77 34.84
Bra013860.1-P Field mustard nucleus, plastid 42.53 34.24
AT4G25070.2 Thale cress plastid 43.77 32.07
EES08547 Sorghum nucleus 42.35 28.67
Protein Annotations
EnsemblPlants:EES04143EnsemblPlantsGene:SORBI_3003G412300EntrezGene:8059394ncoils:CoilPANTHER:PTHR31762PANTHER:PTHR31762:SF4
ProteinID:EES04143ProteinID:EES04143.1RefSeq:XP_002459023.1SEG:segSUPFAM:SSF57997unigene:Sbi.12841
UniParc:UPI0001A85628UniProt:C5XH04MapMan:22.5.7.1.2:::
Description
hypothetical protein
Coordinates
chr3:-:71957823..71965868
Molecular Weight (calculated)
61270.8 Da
IEP (calculated)
5.893
GRAVY (calculated)
-0.635
Length
562 amino acids
Sequence
(BLAST)
001: MDRLRAGSPV YGRQRSGSST GSSSPGGVSP SHHRSSSTSS AASAAGAAGI SNVRRTQNVA ARAAAARLAQ VMASQNAAAA AGDDDDDDDY AADHPPPPPG
101: RFGSGRVAHG SNGVSLLGRS ARSPSPALGR NIVEPPPTVR SSSAGRPAVA SRPTTTVVPP IKTNTTLRTP SPIPPVSVEP PVDRTRPKRF DAGLHNSRES
201: GLKREASTLH DELDMLQEEN ESVLEKLRLA EERCEEAEAR AKELEKQVAA LGEGVSLEAR LLSRKEAALK QREAALKAAR ESKDGRDGEV TTLRHELESA
301: KEEVASAMDQ LKEAESETKA LRSMTQRMVL TQEEMEEVVL KRCWLARYWG LAVQYGVYPE IAVSKYEHWS SLAPLPLEIV LSAGQKAKEE PRKQGENGQG
401: RNKLAREMSD VMGEGNIESM LSVEMGLREL SSLKVEDAVV VALGQHRRPS IVRQFTSDFK SPGEPKYLEA FDLSPEEAED VSFKQAWLIY FWRRAKTHGV
501: EEDIADDRLQ FWIGRNAQAP NSHDAIDVER GLTELRKLGI EQQLWEGSRA DIDQASLAME NQ
Best Arabidopsis Sequence Match ( AT3G48860.2 )
(BLAST)
001: MDRRRAGSPV YGRQWSESSN STEATSPAMS PAHRKQLGGI GGFSTVKRTQ NVAAKAAAQR LAKVMALQNK DNGDEDDEDE DEDLSLRFAS ASLKPARHAP
101: SSISSTGSNS SNGNNNLPAV SFAPRTRSPS PALGRNFAEQ VPSSVRSASA GRPSMSARST TPTPIPNLMP PSRVSVKTPV SIPPLDPPTR SRDKRFFADV
201: PSVNSKEKGD QREASALRDE LDMLQEENEN VLEKLRRAEE KRVEAEARAK ELEKQVASLG EGVSLEAKLL SRKEAALRQR EAALNVAKQK KSGKDEEIVS
301: LRSELENLKD EATTAAERLQ EAESEAKSLR TMTQRMILTQ DEMEEVVLKR CWLARYWGLA VQHGICADIA PSRQEHWSKL APLPFELVTS AAQKAKELSW
401: DKGGNDRSKA ARDLSDLTGE GNIESMLSVE MGLRELASLK VEDAVVLIFA QQRKLSLVRH TVSDSKGHGE SRFIDAYELG EAEQEDVAFK QAWLMYFWGR
501: AKLHGVEDDI AEERVQLWIS RSSGKSQTTS HDALDVERGL IELRKLGIEQ QLWEASRREI DQLPSPTSSN HDLDADS
Arabidopsis Description
SCD2Coiled-coil domain-containing protein SCD2 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWD5]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.