Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- mitochondrion 2
- nucleus 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr9P01060_001 | Banana | plastid | 51.89 | 53.23 |
| VIT_01s0244g00070.t01 | Wine grape | nucleus, plastid | 61.96 | 44.48 |
| KRG93140 | Soybean | plastid | 55.67 | 41.94 |
| GSMUA_Achr4P00070_001 | Banana | plastid | 53.15 | 40.5 |
| KRH36369 | Soybean | nucleus, plastid | 53.15 | 39.89 |
| AT5G13260.1 | Thale cress | plastid | 53.4 | 39.48 |
| CDY70607 | Canola | nucleus | 22.67 | 38.46 |
| EES04143 | Sorghum | plastid | 53.4 | 37.72 |
| Solyc03g118390.2.1 | Tomato | nucleus | 53.15 | 37.21 |
| Os01t0928100-01 | Rice | plasma membrane | 52.9 | 36.84 |
| Bra008842.1-P | Field mustard | nucleus, plastid | 49.62 | 36.55 |
| TraesCS3B01G476100.1 | Wheat | plastid | 51.39 | 35.36 |
| TraesCS3A01G442300.2 | Wheat | plastid | 51.13 | 35.18 |
| TraesCS3D01G435000.1 | Wheat | plastid | 51.13 | 35.18 |
| HORVU3Hr1G096450.1 | Barley | plastid | 51.64 | 34.05 |
| Solyc10g037930.1.1 | Tomato | cytosol | 10.58 | 26.09 |
| Os11t0520500-00 | Rice | plasma membrane | 34.51 | 19.8 |
| HORVU4Hr1G023390.10 | Barley | cytosol, nucleus | 34.26 | 18.84 |
| Zm00001d049273_P001 | Maize | nucleus | 32.75 | 18.18 |
| TraesCS4A01G192600.1 | Wheat | nucleus | 35.01 | 17.91 |
| TraesCS4D01G120700.1 | Wheat | nucleus | 33.0 | 17.54 |
| TraesCS4B01G122700.1 | Wheat | nucleus | 34.26 | 17.44 |
| EES08547 | Sorghum | nucleus | 33.75 | 16.14 |
| GSMUA_Achr9P01070_001 | Banana | cytosol | 1.51 | 3.12 |
Protein Annotations
| EnsemblPlants:Solyc05g023770.2.1 | EnsemblPlantsGene:Solyc05g023770.2 | ncoils:Coil | PANTHER:PTHR31762 | PANTHER:PTHR31762:SF5 | SEG:seg |
| SUPFAM:SSF57997 | UniParc:UPI00027658D9 | UniProt:K4BZL6 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chr5:-:29312379..29326489
Molecular Weight (calculated)
42952.5 Da
IEP (calculated)
8.804
GRAVY (calculated)
-0.608
Length
397 amino acids
Sequence
(BLAST)
(BLAST)
001: MDRARTASPS QLRKWSSESG APMAALTVGS SSPRHGRSSS ITGMSNIKRT QNVAAKAAAQ RLAQVMASQA ATGNDDDEDG DDDLGFRFSA PPPPSFSRSK
101: VSTAANSSSD SNAINPVIQS AKLNTRSSSP ALARNIVEEL PSLRSTSAGR PTVPSRPPPS IPSTQQPVRT PSPIPPIDPP TNKLREKRFS PDLRQVNLKD
201: TGDHRAASAL RDELDMLQEE NENLLGKLRV AETSYEEAEA RVKELEKQVA ALGEGVSLEA KLLSRKEASL RQREAALKDA KQAKNGIDAE LASLHSNVQK
301: AKDEAAAAVD QLQGSESEVK ALRSMTQRMI LTQNEMEDVV LKRCWLARYW GLATQFGICA DIAASKHEYW SSFAPLPFEL VISAGQKAKE ECLEKGK
101: VSTAANSSSD SNAINPVIQS AKLNTRSSSP ALARNIVEEL PSLRSTSAGR PTVPSRPPPS IPSTQQPVRT PSPIPPIDPP TNKLREKRFS PDLRQVNLKD
201: TGDHRAASAL RDELDMLQEE NENLLGKLRV AETSYEEAEA RVKELEKQVA ALGEGVSLEA KLLSRKEASL RQREAALKDA KQAKNGIDAE LASLHSNVQK
301: AKDEAAAAVD QLQGSESEVK ALRSMTQRMI LTQNEMEDVV LKRCWLARYW GLATQFGICA DIAASKHEYW SSFAPLPFEL VISAGQKAKE ECLEKGK
001: MERARTESPS YFRQWSGDSG TTNAAAVAPS SPARHHHARS SSVTNMSNVK RAQNVAAKAA AQRLAKVMAS QTNNDDDDDD DDDEVGGDDL GFRYGAPPPL
101: SFTRNPSSTI AKPKPVASSA VVPPPKISRS SSPANSPAVS VRASQPPVPP SKLRNQTTNP LPVATPKTEK RVLADIGHFN GKDSKDQHEA SALRDELDML
201: QEENDSILEK LRLEDEKCKE AEARVRELEK QVTSLGEGVS LEAKLLSRKE AALRQREAAL KDARQNRDGT NRETTALRSQ VETAKLETAA IVAQLQGAES
301: EVNGLRTMTH RMILTQKEME EVVLKRCWLA RYWGLASRYG ICSDIATSKY EYWSSLAPLP FEIVLSAGQK AKEESWEKES EENEKRSQLV QDINDLTGEG
401: NIESMLSVEM GLKELTSLKV EVAITITLAQ LRLANTTRLS DIELKSPGGP KITETLELSQ EESEDVLFKE AWLTYFWRRA QSLGIEVDTA RERLRFWISR
501: SAHSPSSHDA MEVEQGLTEL RKLRIERRLW EASRSSQ
101: SFTRNPSSTI AKPKPVASSA VVPPPKISRS SSPANSPAVS VRASQPPVPP SKLRNQTTNP LPVATPKTEK RVLADIGHFN GKDSKDQHEA SALRDELDML
201: QEENDSILEK LRLEDEKCKE AEARVRELEK QVTSLGEGVS LEAKLLSRKE AALRQREAAL KDARQNRDGT NRETTALRSQ VETAKLETAA IVAQLQGAES
301: EVNGLRTMTH RMILTQKEME EVVLKRCWLA RYWGLASRYG ICSDIATSKY EYWSSLAPLP FEIVLSAGQK AKEESWEKES EENEKRSQLV QDINDLTGEG
401: NIESMLSVEM GLKELTSLKV EVAITITLAQ LRLANTTRLS DIELKSPGGP KITETLELSQ EESEDVLFKE AWLTYFWRRA QSLGIEVDTA RERLRFWISR
501: SAHSPSSHDA MEVEQGLTEL RKLRIERRLW EASRSSQ
Arabidopsis Description
Myosin [Source:UniProtKB/TrEMBL;Acc:Q8VZL1]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.