Factsheet for Os11t0520500-00

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 5
mitochondrion 2
nucleus 1

Predictors

GFP

MS/MS

Papers

plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d049273_P001	Maize	nucleus	58.81	56.92
HORVU4Hr1G023390.10	Barley	cytosol, nucleus	58.24	55.82
TraesCS4D01G120700.1	Wheat	nucleus	60.12	55.69
TraesCS4B01G122700.1	Wheat	nucleus	60.12	53.33
TraesCS4A01G192600.1	Wheat	nucleus	59.1	52.71
EES08547	Sorghum	nucleus	61.56	51.33
CDY64711	Canola	cytosol	19.36	45.89
KRG93140	Soybean	plastid	31.36	41.18
GSMUA_Achr9P01070_001	Banana	cytosol	11.27	40.62
KRH36369	Soybean	nucleus, plastid	30.92	40.45
Os01t0928100-01	Rice	plasma membrane	33.09	40.18
KRH63847	Soybean	endoplasmic reticulum, nucleus	32.23	38.72
KRH54118	Soybean	endoplasmic reticulum	32.23	38.72
VIT_01s0244g00070.t01	Wine grape	nucleus, plastid	30.92	38.7
VIT_17s0000g00390.t01	Wine grape	mitochondrion, plastid	31.5	38.18
Solyc03g118390.2.1	Tomato	nucleus	30.49	37.21
CDX69654	Canola	nucleus, plastid	28.32	36.23
CDY09779	Canola	nucleus, plastid	28.03	36.06
AT5G13260.1	Thale cress	plastid	27.46	35.38
Bra008842.1-P	Field mustard	nucleus, plastid	27.17	34.88
Solyc05g023770.2.1	Tomato	plastid	19.8	34.51
CDX88044	Canola	mitochondrion	27.02	34.5
AT3G48860.2	Thale cress	nucleus	28.76	34.49
CDX80382	Canola	mitochondrion	27.02	34.44
CDY05877	Canola	nucleus, plastid	28.03	34.22
CDX68503	Canola	nucleus	3.76	33.77
Bra018031.1-P	Field mustard	mitochondrion	28.03	33.33
Bra009703.1-P	Field mustard	mitochondrion	23.99	32.94
AT5G23700.3	Thale cress	mitochondrion, plastid	27.46	32.87
CDY03383	Canola	nucleus, plastid	28.03	29.71
CDY34338	Canola	nucleus, plastid	27.89	29.65
Bra013860.1-P	Field mustard	nucleus, plastid	27.75	27.51
AT4G25070.2	Thale cress	plastid	27.31	24.64
CDY70607	Canola	nucleus	6.79	20.09

Protein Annotations

EnsemblPlants:Os11t0520500-00	EnsemblPlantsGene:Os11g0520500	ncoils:Coil	PANTHER:PTHR31762	PANTHER:PTHR31762:SF7	ProteinID:BAT14219.1
SEG:seg	UniParc:UPI00039399FD	UniProt:A0A0P0Y2Q1	MapMan:22.5.7.1.2	:	:

Description

Conserved hypothetical protein. (Os11t0520500-00)

Coordinates

chr11:+:18780521..18788731

Molecular Weight (calculated)

75986.2 Da

IEP (calculated)

6.135

GRAVY (calculated)

-0.651

Length

692 amino acids

Sequence
(BLAST)

001: MDAAAAAAPR GGSTGRRPTS SSSASSAAAA ARAAAAREAM ARMEEVMLAH AGAAGEFSII LDAPLPSLHH YRRNPTPDAA ARRGGGGRDE GKPAAAVVEE
101: DTALQLLARG RGGRSSSATR RVEEERPSSR RSGRERAGDT GAIKAVEPEK PAAEVEAEVV GRWSRRERDD GGEEAAVSRK PLAAAPVVVD EEVTPLQLLA
201: RGARSSSAAR RVVQEEPQVV EAVAARPSSR RSRREGNGDA GVKAVVPDAA AEVEPEIAGR WSSRRSEDGS EEAAAVLPKP LAAIVTGARS RSNSPAISRN
301: GVDTGAANRP PSTGRSTFAP PVGVNIRPLQ AVEMPNGTPR ERRAIYPDPT FAQSTRSRDS HDSSTITEEL EMLKDENVNL LEKLGLAEER FRQSEARTRE
401: LEKQVANLGD GLSMEVKLMK RREEMLVRKE QEIRKALISK NDKSEEIATL QKQLQSAREK EAAAVQKLQE AESETKYLRT MTHRMILSKE EMEEVVMKRC
501: WLARYWGLAV QYGIYPDISM SKHEYWSSFA PLPFEYVTAA GQRAKDGSLR DDLEDTERFV HELTVTAGEG NIETMLSVDK GLQELAFLKV EDAVLIALAH
601: HHRPNVAELV DPDIKSSGDE KFTEAFDLSK EEEEDVLFKQ AWLVYFWRRA KTHNVEDDIA EERLQMWIDR HGQQPTSHDA VDGVRTLPKK RS

Best Arabidopsis Sequence Match ( AT3G48860.2 )
(BLAST)

001: MDRRRAGSPV YGRQWSESSN STEATSPAMS PAHRKQLGGI GGFSTVKRTQ NVAAKAAAQR LAKVMALQNK DNGDEDDEDE DEDLSLRFAS ASLKPARHAP
101: SSISSTGSNS SNGNNNLPAV SFAPRTRSPS PALGRNFAEQ VPSSVRSASA GRPSMSARST TPTPIPNLMP PSRVSVKTPV SIPPLDPPTR SRDKRFFADV
201: PSVNSKEKGD QREASALRDE LDMLQEENEN VLEKLRRAEE KRVEAEARAK ELEKQVASLG EGVSLEAKLL SRKEAALRQR EAALNVAKQK KSGKDEEIVS
301: LRSELENLKD EATTAAERLQ EAESEAKSLR TMTQRMILTQ DEMEEVVLKR CWLARYWGLA VQHGICADIA PSRQEHWSKL APLPFELVTS AAQKAKELSW
401: DKGGNDRSKA ARDLSDLTGE GNIESMLSVE MGLRELASLK VEDAVVLIFA QQRKLSLVRH TVSDSKGHGE SRFIDAYELG EAEQEDVAFK QAWLMYFWGR
501: AKLHGVEDDI AEERVQLWIS RSSGKSQTTS HDALDVERGL IELRKLGIEQ QLWEASRREI DQLPSPTSSN HDLDADS

Arabidopsis Description

SCD2Coiled-coil domain-containing protein SCD2 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWD5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.