Subcellular Localization
min:
: max
Winner_takes_all: nucleus, plastid
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 2
- mitochondrion 2
- cytosol 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
CDY03383 | Canola | nucleus, plastid | 80.95 | 80.7 |
Bra013860.1-P | Field mustard | nucleus, plastid | 77.27 | 72.06 |
CDY64711 | Canola | cytosol | 24.27 | 54.11 |
AT4G25070.2 | Thale cress | plastid | 58.22 | 49.41 |
CDX68503 | Canola | nucleus | 5.68 | 48.05 |
CDY05877 | Canola | nucleus, plastid | 39.94 | 45.86 |
KRH63847 | Soybean | endoplasmic reticulum, nucleus | 40.25 | 45.49 |
GSMUA_Achr9P01070_001 | Banana | cytosol | 13.36 | 45.31 |
VIT_17s0000g00390.t01 | Wine grape | mitochondrion, plastid | 39.63 | 45.18 |
GSMUA_Achr4P00070_001 | Banana | plastid | 36.1 | 45.11 |
CDX88044 | Canola | mitochondrion | 37.33 | 44.83 |
KRH54118 | Soybean | endoplasmic reticulum | 39.63 | 44.79 |
CDX80382 | Canola | mitochondrion | 37.33 | 44.75 |
Solyc03g118390.2.1 | Tomato | nucleus | 38.25 | 43.92 |
Os01t0928100-01 | Rice | plasma membrane | 37.63 | 42.98 |
EES04143 | Sorghum | plastid | 36.87 | 42.7 |
CDY09779 | Canola | nucleus, plastid | 35.18 | 42.57 |
CDX69654 | Canola | nucleus, plastid | 35.33 | 42.51 |
TraesCS3A01G442300.2 | Wheat | plastid | 36.87 | 41.59 |
TraesCS3D01G435000.1 | Wheat | plastid | 36.71 | 41.42 |
TraesCS3B01G476100.1 | Wheat | plastid | 36.41 | 41.07 |
HORVU3Hr1G096450.1 | Barley | plastid | 36.87 | 39.87 |
GSMUA_Achr9P01060_001 | Banana | plastid | 22.27 | 37.47 |
HORVU4Hr1G023390.10 | Barley | cytosol, nucleus | 32.41 | 29.22 |
TraesCS4D01G120700.1 | Wheat | nucleus | 32.1 | 27.98 |
Zm00001d049273_P001 | Maize | nucleus | 30.72 | 27.97 |
Os11t0520500-00 | Rice | plasma membrane | 29.65 | 27.89 |
CDY70607 | Canola | nucleus | 9.83 | 27.35 |
TraesCS4A01G192600.1 | Wheat | nucleus | 32.57 | 27.32 |
TraesCS4B01G122700.1 | Wheat | nucleus | 32.57 | 27.18 |
EES08547 | Sorghum | nucleus | 32.26 | 25.3 |
CDY27806 | Canola | plastid | 29.49 | 24.58 |
CDY41922 | Canola | plastid | 30.11 | 24.56 |
Protein Annotations
EnsemblPlants:CDY34338 | EnsemblPlantsGene:GSBRNA2T00056377001 | ncoils:Coil | PANTHER:PTHR31762 | PANTHER:PTHR31762:SF4 | ProteinID:CDY34338 |
ProteinID:CDY34338.1 | SEG:seg | UniParc:UPI0004EEB9FF | UniProt:A0A078HC33 | MapMan:22.5.7.1.2 | : |
Description
BnaA01g14410DBnaA01g14410D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HC33]
Coordinates
chrLK032332:+:368745..372319
Molecular Weight (calculated)
73945.6 Da
IEP (calculated)
5.322
GRAVY (calculated)
-0.859
Length
651 amino acids
Sequence
(BLAST)
(BLAST)
001: MARRRWEGSD NVGSANSSPA MSPSHRMTNN GGGISGRSTL RKQNAAELLA KVMEQRDYDY DYGDEEEDLY QVHLPPLSRD RKRDDKRVGK GTVRGKPAPP
101: KRPVLIPPKF DDESDGDEPV KIPQKNVRVP VTKAPANVRV SAVRPVLLPP KFDDESDGDE VAADLPRNRV KIPEENASVQ KEAPAGKLKV LSPPKFDGDE
201: ITANEVKNQV EEIPQKNASP ALRVRVPAYS RRNPMEDSEQ NGDRKVNVQF DVPAAKQSEA QLKYKKRFSS AETFAPYQEE DDREASALRD ELDMLQEEND
301: NILNKLQRAE ERREAAQARA RELEKQIASL GEGANFDVKL LKRKEAALRQ REAALRAAEQ KRDGRNKETD AFCEELQSLK EETEKAVEQL QDAQAETKSL
401: RTMIHRTILT HEEMEEVVLK RCWLARYWEL AVQHGIYKDI APSRHEHWSA LAPLPFEVVI SAAQKPEDSW QTDGSDRTWS KVVSKFSDAN GDGNIESMLA
501: VETGLREIAS LKVEDAIMLV FAGFRQKHVV RQSNTDPRVQ GEPKFAEAFE LSHDEKQDIL FKEAWLMYYW KRAKIHSVES DIAEDRLKFW ISRIAEQPTS
601: HDAVDVERGM RELRKLGIEQ QLWEASRAQL TDSTFPPSLS VSDFCDGDNQ F
101: KRPVLIPPKF DDESDGDEPV KIPQKNVRVP VTKAPANVRV SAVRPVLLPP KFDDESDGDE VAADLPRNRV KIPEENASVQ KEAPAGKLKV LSPPKFDGDE
201: ITANEVKNQV EEIPQKNASP ALRVRVPAYS RRNPMEDSEQ NGDRKVNVQF DVPAAKQSEA QLKYKKRFSS AETFAPYQEE DDREASALRD ELDMLQEEND
301: NILNKLQRAE ERREAAQARA RELEKQIASL GEGANFDVKL LKRKEAALRQ REAALRAAEQ KRDGRNKETD AFCEELQSLK EETEKAVEQL QDAQAETKSL
401: RTMIHRTILT HEEMEEVVLK RCWLARYWEL AVQHGIYKDI APSRHEHWSA LAPLPFEVVI SAAQKPEDSW QTDGSDRTWS KVVSKFSDAN GDGNIESMLA
501: VETGLREIAS LKVEDAIMLV FAGFRQKHVV RQSNTDPRVQ GEPKFAEAFE LSHDEKQDIL FKEAWLMYYW KRAKIHSVES DIAEDRLKFW ISRIAEQPTS
601: HDAVDVERGM RELRKLGIEQ QLWEASRAQL TDSTFPPSLS VSDFCDGDNQ F
001: MARRPGTSAS SSPTMSPSHR MSGGGGGISG KSTLRKQNAA ELLAKVMEKR EYDYDYDDED GGEDLYQVHL PPLTQSRRRD DKRIGKGSVN EKKAPAKKPI
101: ILPAPKFDDE SEDDETRANF RPNPVIIPKK NAREPRKAPA TKPVVLPPPK FSNVRRIPVE ISGRNARGSK EASTVKQVVS TPKFDDEYDS DEITEDVPRN
201: PVEIRGPVRG KVAPAVKPVV VLPTKFDDEY DSDEITEDVP RNPVEIRGTV RGKVAPAVKP VVVLPTKFDD EYDSDEITAD VSRNPVEVRD PVRGKLAPVV
301: KPVVLPTKFD DEYDSDEIAA DVSRKAVEIP QKNEKSTLRV RVPAYSRRNP LEEFEQNGED KQNVQCDVPA KQSEAQLKYK KRYHPANILA PNNSNQQEDD
401: REASALRDEL DMLQEENDNI MDKLQRAEER REAAEARAKE LEKQVASLGE GANFDVKLLK RKEAALRQRE AALRAAEQKR DGRNRETNAL SSEFQSLKDE
501: AEKSTEQLQE VEAEIKSLRT MIHRTILSQE EMEEVVLKRC WLARYWELAV QHGICEDIST SRYEHWSALA PLPSEVVLSA AQKSEDSWQT GGSDRTWSKV
601: ISNFSDLNGE GNIESMLAVE TGLREIASLK VEDAVMLALS RYRQTNVARQ AVTDPRVQGE PKFSETFELS HDEQQDILFK EAWLLYFWKR AKIHGVESDI
701: AEERLQFWIN RLGQHSSSHD AIDVERGMRE LRKLGIEQQL WETSRKELID SSFLPSYSVS DYNDE
101: ILPAPKFDDE SEDDETRANF RPNPVIIPKK NAREPRKAPA TKPVVLPPPK FSNVRRIPVE ISGRNARGSK EASTVKQVVS TPKFDDEYDS DEITEDVPRN
201: PVEIRGPVRG KVAPAVKPVV VLPTKFDDEY DSDEITEDVP RNPVEIRGTV RGKVAPAVKP VVVLPTKFDD EYDSDEITAD VSRNPVEVRD PVRGKLAPVV
301: KPVVLPTKFD DEYDSDEIAA DVSRKAVEIP QKNEKSTLRV RVPAYSRRNP LEEFEQNGED KQNVQCDVPA KQSEAQLKYK KRYHPANILA PNNSNQQEDD
401: REASALRDEL DMLQEENDNI MDKLQRAEER REAAEARAKE LEKQVASLGE GANFDVKLLK RKEAALRQRE AALRAAEQKR DGRNRETNAL SSEFQSLKDE
501: AEKSTEQLQE VEAEIKSLRT MIHRTILSQE EMEEVVLKRC WLARYWELAV QHGICEDIST SRYEHWSALA PLPSEVVLSA AQKSEDSWQT GGSDRTWSKV
601: ISNFSDLNGE GNIESMLAVE TGLREIASLK VEDAVMLALS RYRQTNVARQ AVTDPRVQGE PKFSETFELS HDEQQDILFK EAWLLYFWKR AKIHGVESDI
701: AEERLQFWIN RLGQHSSSHD AIDVERGMRE LRKLGIEQQL WETSRKELID SSFLPSYSVS DYNDE
Arabidopsis Description
Caldesmon-like protein [Source:UniProtKB/TrEMBL;Acc:A0MFT2]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.