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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus, plastid

Predictor Summary:
  • nucleus 3
  • plastid 2
  • mitochondrion 2
  • cytosol 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY03383 Canola nucleus, plastid 80.95 80.7
Bra013860.1-P Field mustard nucleus, plastid 77.27 72.06
CDY64711 Canola cytosol 24.27 54.11
AT4G25070.2 Thale cress plastid 58.22 49.41
CDX68503 Canola nucleus 5.68 48.05
CDY05877 Canola nucleus, plastid 39.94 45.86
KRH63847 Soybean endoplasmic reticulum, nucleus 40.25 45.49
GSMUA_Achr9P01070_001 Banana cytosol 13.36 45.31
VIT_17s0000g00390.t01 Wine grape mitochondrion, plastid 39.63 45.18
GSMUA_Achr4P00070_001 Banana plastid 36.1 45.11
CDX88044 Canola mitochondrion 37.33 44.83
KRH54118 Soybean endoplasmic reticulum 39.63 44.79
CDX80382 Canola mitochondrion 37.33 44.75
Solyc03g118390.2.1 Tomato nucleus 38.25 43.92
Os01t0928100-01 Rice plasma membrane 37.63 42.98
EES04143 Sorghum plastid 36.87 42.7
CDY09779 Canola nucleus, plastid 35.18 42.57
CDX69654 Canola nucleus, plastid 35.33 42.51
TraesCS3A01G442300.2 Wheat plastid 36.87 41.59
TraesCS3D01G435000.1 Wheat plastid 36.71 41.42
TraesCS3B01G476100.1 Wheat plastid 36.41 41.07
HORVU3Hr1G096450.1 Barley plastid 36.87 39.87
GSMUA_Achr9P01060_001 Banana plastid 22.27 37.47
HORVU4Hr1G023390.10 Barley cytosol, nucleus 32.41 29.22
TraesCS4D01G120700.1 Wheat nucleus 32.1 27.98
Zm00001d049273_P001 Maize nucleus 30.72 27.97
Os11t0520500-00 Rice plasma membrane 29.65 27.89
CDY70607 Canola nucleus 9.83 27.35
TraesCS4A01G192600.1 Wheat nucleus 32.57 27.32
TraesCS4B01G122700.1 Wheat nucleus 32.57 27.18
EES08547 Sorghum nucleus 32.26 25.3
CDY27806 Canola plastid 29.49 24.58
CDY41922 Canola plastid 30.11 24.56
Protein Annotations
EnsemblPlants:CDY34338EnsemblPlantsGene:GSBRNA2T00056377001ncoils:CoilPANTHER:PTHR31762PANTHER:PTHR31762:SF4ProteinID:CDY34338
ProteinID:CDY34338.1SEG:segUniParc:UPI0004EEB9FFUniProt:A0A078HC33MapMan:22.5.7.1.2:
Description
BnaA01g14410DBnaA01g14410D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HC33]
Coordinates
chrLK032332:+:368745..372319
Molecular Weight (calculated)
73945.6 Da
IEP (calculated)
5.322
GRAVY (calculated)
-0.859
Length
651 amino acids
Sequence
(BLAST)
001: MARRRWEGSD NVGSANSSPA MSPSHRMTNN GGGISGRSTL RKQNAAELLA KVMEQRDYDY DYGDEEEDLY QVHLPPLSRD RKRDDKRVGK GTVRGKPAPP
101: KRPVLIPPKF DDESDGDEPV KIPQKNVRVP VTKAPANVRV SAVRPVLLPP KFDDESDGDE VAADLPRNRV KIPEENASVQ KEAPAGKLKV LSPPKFDGDE
201: ITANEVKNQV EEIPQKNASP ALRVRVPAYS RRNPMEDSEQ NGDRKVNVQF DVPAAKQSEA QLKYKKRFSS AETFAPYQEE DDREASALRD ELDMLQEEND
301: NILNKLQRAE ERREAAQARA RELEKQIASL GEGANFDVKL LKRKEAALRQ REAALRAAEQ KRDGRNKETD AFCEELQSLK EETEKAVEQL QDAQAETKSL
401: RTMIHRTILT HEEMEEVVLK RCWLARYWEL AVQHGIYKDI APSRHEHWSA LAPLPFEVVI SAAQKPEDSW QTDGSDRTWS KVVSKFSDAN GDGNIESMLA
501: VETGLREIAS LKVEDAIMLV FAGFRQKHVV RQSNTDPRVQ GEPKFAEAFE LSHDEKQDIL FKEAWLMYYW KRAKIHSVES DIAEDRLKFW ISRIAEQPTS
601: HDAVDVERGM RELRKLGIEQ QLWEASRAQL TDSTFPPSLS VSDFCDGDNQ F
Best Arabidopsis Sequence Match ( AT4G25070.1 )
(BLAST)
001: MARRPGTSAS SSPTMSPSHR MSGGGGGISG KSTLRKQNAA ELLAKVMEKR EYDYDYDDED GGEDLYQVHL PPLTQSRRRD DKRIGKGSVN EKKAPAKKPI
101: ILPAPKFDDE SEDDETRANF RPNPVIIPKK NAREPRKAPA TKPVVLPPPK FSNVRRIPVE ISGRNARGSK EASTVKQVVS TPKFDDEYDS DEITEDVPRN
201: PVEIRGPVRG KVAPAVKPVV VLPTKFDDEY DSDEITEDVP RNPVEIRGTV RGKVAPAVKP VVVLPTKFDD EYDSDEITAD VSRNPVEVRD PVRGKLAPVV
301: KPVVLPTKFD DEYDSDEIAA DVSRKAVEIP QKNEKSTLRV RVPAYSRRNP LEEFEQNGED KQNVQCDVPA KQSEAQLKYK KRYHPANILA PNNSNQQEDD
401: REASALRDEL DMLQEENDNI MDKLQRAEER REAAEARAKE LEKQVASLGE GANFDVKLLK RKEAALRQRE AALRAAEQKR DGRNRETNAL SSEFQSLKDE
501: AEKSTEQLQE VEAEIKSLRT MIHRTILSQE EMEEVVLKRC WLARYWELAV QHGICEDIST SRYEHWSALA PLPSEVVLSA AQKSEDSWQT GGSDRTWSKV
601: ISNFSDLNGE GNIESMLAVE TGLREIASLK VEDAVMLALS RYRQTNVARQ AVTDPRVQGE PKFSETFELS HDEQQDILFK EAWLLYFWKR AKIHGVESDI
701: AEERLQFWIN RLGQHSSSHD AIDVERGMRE LRKLGIEQQL WETSRKELID SSFLPSYSVS DYNDE
Arabidopsis Description
Caldesmon-like protein [Source:UniProtKB/TrEMBL;Acc:A0MFT2]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.