Factsheet for AT4G25070.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 5
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra013860.1-P	Field mustard	nucleus, plastid	53.32	58.6
CDY03383	Canola	nucleus, plastid	49.8	58.5
CDY34338	Canola	nucleus, plastid	49.41	58.22
VIT_17s0000g00390.t01	Wine grape	mitochondrion, plastid	35.33	47.46
KRH63847	Soybean	endoplasmic reticulum, nucleus	35.59	47.4
AT3G48860.2	Thale cress	nucleus	35.46	47.14
GSMUA_Achr9P01070_001	Banana	cytosol	11.73	46.88
KRH54118	Soybean	endoplasmic reticulum	35.07	46.7
GSMUA_Achr4P00070_001	Banana	plastid	31.03	45.68
Solyc03g118390.2.1	Tomato	nucleus	33.38	45.15
AT5G23700.3	Thale cress	mitochondrion, plastid	33.9	44.98
AT5G13260.1	Thale cress	plastid	30.77	43.95
EES04143	Sorghum	plastid	32.07	43.77
Os01t0928100-01	Rice	plasma membrane	32.2	43.33
TraesCS3A01G442300.2	Wheat	plastid	31.42	41.77
TraesCS3B01G476100.1	Wheat	plastid	31.42	41.77
TraesCS3D01G435000.1	Wheat	plastid	31.42	41.77
HORVU3Hr1G096450.1	Barley	plastid	31.55	40.2
GSMUA_Achr9P01060_001	Banana	plastid	19.82	39.28
TraesCS4D01G120700.1	Wheat	nucleus	28.29	29.05
Zm00001d049273_P001	Maize	nucleus	26.86	28.81
HORVU4Hr1G023390.10	Barley	cytosol, nucleus	26.86	28.53
TraesCS4A01G192600.1	Wheat	nucleus	27.9	27.58
Os11t0520500-00	Rice	plasma membrane	24.64	27.31
TraesCS4B01G122700.1	Wheat	nucleus	27.64	27.18
EES08547	Sorghum	nucleus	28.42	26.27
AT4G08630.1	Thale cress	plastid	27.38	26.25

Protein Annotations

ArrayExpress:AT4G25070	EMBL:DQ653409	EnsemblPlants:AT4G25070.2	EnsemblPlantsGene:AT4G25070	EntrezGene:828610	ncoils:Coil
PANTHER:PTHR31762	PANTHER:PTHR31762:SF4	PO:PO:0000005	PO:PO:0000293	ProteinID:AEE84999.1	ProteinID:OAP00432.1
RefSeq:AT4G25070	RefSeq:AT4G25070-TAIR-G	RefSeq:NP_001119051.1	SEG:seg	TAIR:AT4G25070	TAIR:AT4G25070.2
Unigene:At.51031	UniParc:UPI0000E68819	UniProt:A0A178V607	UniProt:A0MFT2	MapMan:22.5.7.1.2	:

Description

Caldesmon-like protein [Source:UniProtKB/TrEMBL;Acc:A0MFT2]

Coordinates

chr4:+:12872379..12876734

Molecular Weight (calculated)

86856.6 Da

IEP (calculated)

5.046

GRAVY (calculated)

-0.841

Length

767 amino acids

Sequence
(BLAST)

001: MARRPGTSAS SSPTMSPSHR MSGGGGGISG KSTLRKQNAA ELLAKVMEKR EYDYDYDDED GGEDLYQVHL PPLTQSRRRD DKRIGKGSVN EKKAPAKKPI
101: ILPAPKFDDE SEDDETRANF RPNPVIIPKK NAREPRKAPA TKPVVLPPPK FSNVRRIPVE ISGRNARGSK EASTVKQVVS TPKFDDEYDS DEITEDVPRN
201: PVEIRGPVRG KVAPAVKPVV VLPTKFDDEY DSDEITEDVP RNPVEIRGTV RGKVAPAVKP VVVLPTKFDD EYDSDEITAD VSRNPVEVRD PVRGKLAPVV
301: KPVVLPTKFD DEYDSDEIAA DVSRKAVEIP QKNEKSTLRV RVPAYSRRNP LEEFEQNGED KQNVQCDVPA KQSEAQLKYK KSFRYHPANI LAPNNSNQQE
401: DDREASALRD ELDMLQEEND NIMDKLQRAE ERREAAEARA KELEKQVASL GEGANFDVKL LKRKEAALRQ REAALRAAEQ KRDGRNRETN ALSSEFQSLK
501: DEAEKSTEQL QEVEAEIKSL RTMIHRTILS QEEMEEVVLK RCWLARYWEL AVQHGICEDI STSRYEHWSA LAPLPSEVVL SAAQKSEDSW QTGGSDRTWS
601: KVISNFSDLN GEGNIESMLA VETGLREIAS LKVEDAVMLA LSRYRQTNVA RQAVTDPRVQ GEPKFSETFE LSHDEQQDIL FKEAWLLYFW KRAKIHGVES
701: DIAEERLQFW INRLGQHSSS HDAIDVERGM RELRKLGIEQ QLWETSRKEL IDSSFLPSYS VSDYNDE

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.