Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 2
- mitochondrion 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY34338 | Canola | nucleus, plastid | 72.06 | 77.27 |
| CDY03383 | Canola | nucleus, plastid | 70.2 | 75.04 |
| AT4G25070.2 | Thale cress | plastid | 58.6 | 53.32 |
| VIT_17s0000g00390.t01 | Wine grape | mitochondrion, plastid | 37.68 | 46.06 |
| Bra018031.1-P | Field mustard | mitochondrion | 37.82 | 45.36 |
| GSMUA_Achr9P01070_001 | Banana | cytosol | 12.46 | 45.31 |
| KRH63847 | Soybean | endoplasmic reticulum, nucleus | 37.11 | 44.97 |
| GSMUA_Achr4P00070_001 | Banana | plastid | 33.52 | 44.91 |
| KRH54118 | Soybean | endoplasmic reticulum | 36.68 | 44.44 |
| Solyc03g118390.2.1 | Tomato | nucleus | 35.82 | 44.09 |
| Bra009703.1-P | Field mustard | mitochondrion | 31.23 | 43.25 |
| Os01t0928100-01 | Rice | plasma membrane | 34.96 | 42.81 |
| EES04143 | Sorghum | plastid | 34.24 | 42.53 |
| Bra008842.1-P | Field mustard | nucleus, plastid | 32.09 | 41.56 |
| TraesCS3A01G442300.2 | Wheat | plastid | 33.81 | 40.9 |
| TraesCS3D01G435000.1 | Wheat | plastid | 33.81 | 40.9 |
| TraesCS3B01G476100.1 | Wheat | plastid | 33.52 | 40.55 |
| HORVU3Hr1G096450.1 | Barley | plastid | 33.95 | 39.37 |
| GSMUA_Achr9P01060_001 | Banana | plastid | 21.35 | 38.5 |
| HORVU4Hr1G023390.10 | Barley | cytosol, nucleus | 29.23 | 28.25 |
| TraesCS4D01G120700.1 | Wheat | nucleus | 29.8 | 27.84 |
| Zm00001d049273_P001 | Maize | nucleus | 28.51 | 27.83 |
| Os11t0520500-00 | Rice | plasma membrane | 27.51 | 27.75 |
| TraesCS4A01G192600.1 | Wheat | nucleus | 30.09 | 27.06 |
| TraesCS4B01G122700.1 | Wheat | nucleus | 29.51 | 26.41 |
| EES08547 | Sorghum | nucleus | 31.09 | 26.14 |
| Bra039472.1-P | Field mustard | plastid | 27.79 | 24.81 |
Protein Annotations
Description
AT4G25070 (E=3e-194) | unknown protein
Coordinates
chrA01:+:8114351..8118048
Molecular Weight (calculated)
79142.5 Da
IEP (calculated)
5.010
GRAVY (calculated)
-0.876
Length
698 amino acids
Sequence
(BLAST)
(BLAST)
001: MARRRWEGSD NVGSANSSPA MSPSHRMTNN GGGISGRSTL RKQNAAELLA KVMEQRDYDY DYGDEEEDLY QVHLPPLSRD RKRDDKRVGK GTVRGKPAPP
101: KRPVLIPPKF DDESDGDEPV KIPQKNVRVP VTKAPALKFD DESDGDEPVK ISQKNVRVPA TRAPAVKFDD ESDGDEPVKI PQKDVRVSAV RPVLLPPKFD
201: DESDGDEVAA DLPRNRVKIP EENASVQKEA PAGKLKVLSP PKFDGDEITA NEVKNQVEEI PQKNASPALR VRVPAYSRRN PMEDSEQNGD RKVNVQFDVP
301: AAKQSEAQLK YKKRFSSAET FAPYQEEDDR EASALRDELD MLQEENDNIL NKLQRAEERR EAAEARAREL EKQIASLGEG ANFDVKLLKR KEAALRQREA
401: ALRAAEQKRD GRNKETDAFC EELQSLKEET EKAVEQLQDA QAETKSLRTM IHRTILTHEE MEEVVLKRCW LARYWELAVQ HGIYKDIAPS RHEHWSALAP
501: LPFEVVISAA QKPEDSWQTD GSDRTWSKVV SKFSDANGDG NIESMLAVET GLREIASLKV EDAIMLVFAG FRQKHVVRQS DTDPRVQGEP KFAEAFELSH
601: DEKQDILFKE AWLMYYWKRA KIHSVESDIA EDRLKFWISR IAEQPTSHDA VDVERGMREL RKLGIEQQLW EASRAQLTDS TFPPSLSVSD FCDGDNQF
101: KRPVLIPPKF DDESDGDEPV KIPQKNVRVP VTKAPALKFD DESDGDEPVK ISQKNVRVPA TRAPAVKFDD ESDGDEPVKI PQKDVRVSAV RPVLLPPKFD
201: DESDGDEVAA DLPRNRVKIP EENASVQKEA PAGKLKVLSP PKFDGDEITA NEVKNQVEEI PQKNASPALR VRVPAYSRRN PMEDSEQNGD RKVNVQFDVP
301: AAKQSEAQLK YKKRFSSAET FAPYQEEDDR EASALRDELD MLQEENDNIL NKLQRAEERR EAAEARAREL EKQIASLGEG ANFDVKLLKR KEAALRQREA
401: ALRAAEQKRD GRNKETDAFC EELQSLKEET EKAVEQLQDA QAETKSLRTM IHRTILTHEE MEEVVLKRCW LARYWELAVQ HGIYKDIAPS RHEHWSALAP
501: LPFEVVISAA QKPEDSWQTD GSDRTWSKVV SKFSDANGDG NIESMLAVET GLREIASLKV EDAIMLVFAG FRQKHVVRQS DTDPRVQGEP KFAEAFELSH
601: DEKQDILFKE AWLMYYWKRA KIHSVESDIA EDRLKFWISR IAEQPTSHDA VDVERGMREL RKLGIEQQLW EASRAQLTDS TFPPSLSVSD FCDGDNQF
001: MARRPGTSAS SSPTMSPSHR MSGGGGGISG KSTLRKQNAA ELLAKVMEKR EYDYDYDDED GGEDLYQVHL PPLTQSRRRD DKRIGKGSVN EKKAPAKKPI
101: ILPAPKFDDE SEDDETRANF RPNPVIIPKK NAREPRKAPA TKPVVLPPPK FSNVRRIPVE ISGRNARGSK EASTVKQVVS TPKFDDEYDS DEITEDVPRN
201: PVEIRGPVRG KVAPAVKPVV VLPTKFDDEY DSDEITEDVP RNPVEIRGTV RGKVAPAVKP VVVLPTKFDD EYDSDEITAD VSRNPVEVRD PVRGKLAPVV
301: KPVVLPTKFD DEYDSDEIAA DVSRKAVEIP QKNEKSTLRV RVPAYSRRNP LEEFEQNGED KQNVQCDVPA KQSEAQLKYK KRYHPANILA PNNSNQQEDD
401: REASALRDEL DMLQEENDNI MDKLQRAEER REAAEARAKE LEKQVASLGE GANFDVKLLK RKEAALRQRE AALRAAEQKR DGRNRETNAL SSEFQSLKDE
501: AEKSTEQLQE VEAEIKSLRT MIHRTILSQE EMEEVVLKRC WLARYWELAV QHGICEDIST SRYEHWSALA PLPSEVVLSA AQKSEDSWQT GGSDRTWSKV
601: ISNFSDLNGE GNIESMLAVE TGLREIASLK VEDAVMLALS RYRQTNVARQ AVTDPRVQGE PKFSETFELS HDEQQDILFK EAWLLYFWKR AKIHGVESDI
701: AEERLQFWIN RLGQHSSSHD AIDVERGMRE LRKLGIEQQL WETSRKELID SSFLPSYSVS DYNDE
101: ILPAPKFDDE SEDDETRANF RPNPVIIPKK NAREPRKAPA TKPVVLPPPK FSNVRRIPVE ISGRNARGSK EASTVKQVVS TPKFDDEYDS DEITEDVPRN
201: PVEIRGPVRG KVAPAVKPVV VLPTKFDDEY DSDEITEDVP RNPVEIRGTV RGKVAPAVKP VVVLPTKFDD EYDSDEITAD VSRNPVEVRD PVRGKLAPVV
301: KPVVLPTKFD DEYDSDEIAA DVSRKAVEIP QKNEKSTLRV RVPAYSRRNP LEEFEQNGED KQNVQCDVPA KQSEAQLKYK KRYHPANILA PNNSNQQEDD
401: REASALRDEL DMLQEENDNI MDKLQRAEER REAAEARAKE LEKQVASLGE GANFDVKLLK RKEAALRQRE AALRAAEQKR DGRNRETNAL SSEFQSLKDE
501: AEKSTEQLQE VEAEIKSLRT MIHRTILSQE EMEEVVLKRC WLARYWELAV QHGICEDIST SRYEHWSALA PLPSEVVLSA AQKSEDSWQT GGSDRTWSKV
601: ISNFSDLNGE GNIESMLAVE TGLREIASLK VEDAVMLALS RYRQTNVARQ AVTDPRVQGE PKFSETFELS HDEQQDILFK EAWLLYFWKR AKIHGVESDI
701: AEERLQFWIN RLGQHSSSHD AIDVERGMRE LRKLGIEQQL WETSRKELID SSFLPSYSVS DYNDE
Arabidopsis Description
Caldesmon-like protein [Source:UniProtKB/TrEMBL;Acc:A0MFT2]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.