Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 4
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY27806 | Canola | plastid | 87.21 | 87.32 |
| AT4G08630.1 | Thale cress | plastid | 68.54 | 67.0 |
| VIT_14s0030g00770.t01 | Wine grape | cytosol | 3.71 | 55.77 |
| GSMUA_Achr2P01550_001 | Banana | cytosol | 25.32 | 53.37 |
| Solyc10g037930.1.1 | Tomato | cytosol | 10.1 | 49.07 |
| TraesCS1A01G102200.1 | Wheat | nucleus, plastid | 22.89 | 46.86 |
| Bra009703.1-P | Field mustard | mitochondrion | 25.7 | 39.88 |
| Bra018031.1-P | Field mustard | mitochondrion | 29.16 | 39.18 |
| Bra008842.1-P | Field mustard | nucleus, plastid | 26.98 | 39.15 |
| PGSC0003DMT400067804 | Potato | cytosol | 10.74 | 38.53 |
| KRH68645 | Soybean | nucleus, plastid | 31.33 | 37.35 |
| KRG96906 | Soybean | nucleus, plastid | 30.31 | 37.09 |
| TraesCS1B01G112600.1 | Wheat | plastid | 25.19 | 36.75 |
| TraesCS1D01G093800.1 | Wheat | plastid | 25.19 | 36.75 |
| KXG21299 | Sorghum | mitochondrion | 24.81 | 33.62 |
| Bra013860.1-P | Field mustard | nucleus, plastid | 24.81 | 27.79 |
| Zm00001d024833_P001 | Maize | mitochondrion | 11.76 | 27.06 |
Protein Annotations
Description
AT4G08630 (E=4e-227) | unknown protein
Coordinates
chrA05:+:23486890..23491308
Molecular Weight (calculated)
86387.0 Da
IEP (calculated)
6.125
GRAVY (calculated)
-0.732
Length
782 amino acids
Sequence
(BLAST)
(BLAST)
001: MRPVHARNQT TDPSSPMMTS PLMNRHARTG SNAGPASNAK KAQTKAAAQR LAAVMSNQTG DDEDSDDDLS FDYNAVGSIG LAAGRSHPSR SPMIKKPVAR
101: RPQMGTPQLA DDDNEDDDFS VDVSSGRPSI GLSGGRAIRP KSPVVTKIAP PRRTQPVNED KKKDDDDDDD DVVSVDYTIG RPSIGLGSGR TMRPQASMNK
201: VQPQGRPVMA VQPTDEENED DEAPYVYTSG VPSVGLAGGR AARSRSPLKK TPPLRHPQVI AQPPSSGDSD ADYDEAYTSV MPSIGLAGGR SMKPRTPLSI
301: RTKEQPQTGV PTSGNRSSFG EDSTLPQTTT NQVDHQSPSA RSAFSNKSSQ SLNAMDQPPS ARSSFSGRPI RTVPLMPSSV PISLKPVTPA FQSDTPTNLR
401: KDKRFSIDLG SSGNLRELGS QRSTSALQDE VDMLQEENES LLGKLRLAED KCEEADARAK QLEKQVISRW FIEVLFLHKL KEAALQQREA ALKVASQTRG
501: GKREDVSALR TEAEIAREEA ASSLEQLHEV ESELNSLKTL TKRLILTQEE MEEVVLKRCW LSRYWGLCVR HGIQADIARA KHEYWSSFAP LPLEIVLSAG
601: QRAREIVSRS NSTLREREKS FQNLHETSGE GNVESMVWVE KGLRELAALK VQEAVAYVMA QNRRNSSSKI FVSDEVKLPM DGQFEAFELS DDEVEDVSFK
701: QAWLSYFWRR AKNHDIEADL ADERLQYWIN QGTRSATSQD AVDVERGLME LRKLNIESQL WQKSRKGLDH ESNPSSHVEL SF
101: RPQMGTPQLA DDDNEDDDFS VDVSSGRPSI GLSGGRAIRP KSPVVTKIAP PRRTQPVNED KKKDDDDDDD DVVSVDYTIG RPSIGLGSGR TMRPQASMNK
201: VQPQGRPVMA VQPTDEENED DEAPYVYTSG VPSVGLAGGR AARSRSPLKK TPPLRHPQVI AQPPSSGDSD ADYDEAYTSV MPSIGLAGGR SMKPRTPLSI
301: RTKEQPQTGV PTSGNRSSFG EDSTLPQTTT NQVDHQSPSA RSAFSNKSSQ SLNAMDQPPS ARSSFSGRPI RTVPLMPSSV PISLKPVTPA FQSDTPTNLR
401: KDKRFSIDLG SSGNLRELGS QRSTSALQDE VDMLQEENES LLGKLRLAED KCEEADARAK QLEKQVISRW FIEVLFLHKL KEAALQQREA ALKVASQTRG
501: GKREDVSALR TEAEIAREEA ASSLEQLHEV ESELNSLKTL TKRLILTQEE MEEVVLKRCW LSRYWGLCVR HGIQADIARA KHEYWSSFAP LPLEIVLSAG
601: QRAREIVSRS NSTLREREKS FQNLHETSGE GNVESMVWVE KGLRELAALK VQEAVAYVMA QNRRNSSSKI FVSDEVKLPM DGQFEAFELS DDEVEDVSFK
701: QAWLSYFWRR AKNHDIEADL ADERLQYWIN QGTRSATSQD AVDVERGLME LRKLNIESQL WQKSRKGLDH ESNPSSHVEL SF
001: MRNTRPIHVR NKSTEPGTPS SPMMTSPLMH RHTRSGSNAG PASNAKKAQT KAAAQRLAAV MSNQTGDEED SDEDLSFDYN AIGTGSIGLA AGRSHPSRSP
101: VIRNPMARRQ QMATPQLVDE DNEDDDFSVD VTSSRPSIGL PGGRAMRPQS PVMTKIAPPR RTQPTNEGNK NDGNDDDDVV SIDYTIGRPS IGLGSGRAMR
201: PQSSMNKTQP QGRPVMAAHQ RADEDNEDDE TPYVYTSSIP SVGLPGGRAA RSRSPLTKNP PLRHPHAVAQ PPSNGESDVD YDESYTSGMP SIGLAGGRSM
301: RPRTPLSIRT KEQPQTGLPT SGSRSSLYED STESSAMSTL THPSQTTNQV EQSPSARSAI SNKSSQSLSA MDQPPSARSS FNGRPIRTAP LMPSSVPISL
401: KPVTPAFQSN TPTNLRKDKR FSMDLGSSGN LRELGSQRST SALQDEVDML QEENESLLEK LRLAEDKCEE ADARAKQLEK QVEILGEGVT MDARLLSRKE
501: AALQQREAAL RIASQNHGGK REDVSALHTE AEIAREEAAS SLDQLHEVEL ELNSLKTVTK RLILTQEEME EVVLKRCWLS RYWGLCVRHG IQPDIAGGKH
601: EYWSSFAPLP LEIVLSAGQR ARDGVSQSNN TYGEREKSLQ NLQETSGEGN LENMIWVEKG LRELASLKVQ EAVAFVMAQN RRNTSSKFFV SDEVKMPMDG
701: QFEAFELSDE EVEDVNFKQA WLSYFWRRAK NHEIESDLVD ERLQYWINQG TRSATSQDAV DVERGLMELR KLNIESQLWQ KSRKGLDHES NPSHLELSF
101: VIRNPMARRQ QMATPQLVDE DNEDDDFSVD VTSSRPSIGL PGGRAMRPQS PVMTKIAPPR RTQPTNEGNK NDGNDDDDVV SIDYTIGRPS IGLGSGRAMR
201: PQSSMNKTQP QGRPVMAAHQ RADEDNEDDE TPYVYTSSIP SVGLPGGRAA RSRSPLTKNP PLRHPHAVAQ PPSNGESDVD YDESYTSGMP SIGLAGGRSM
301: RPRTPLSIRT KEQPQTGLPT SGSRSSLYED STESSAMSTL THPSQTTNQV EQSPSARSAI SNKSSQSLSA MDQPPSARSS FNGRPIRTAP LMPSSVPISL
401: KPVTPAFQSN TPTNLRKDKR FSMDLGSSGN LRELGSQRST SALQDEVDML QEENESLLEK LRLAEDKCEE ADARAKQLEK QVEILGEGVT MDARLLSRKE
501: AALQQREAAL RIASQNHGGK REDVSALHTE AEIAREEAAS SLDQLHEVEL ELNSLKTVTK RLILTQEEME EVVLKRCWLS RYWGLCVRHG IQPDIAGGKH
601: EYWSSFAPLP LEIVLSAGQR ARDGVSQSNN TYGEREKSLQ NLQETSGEGN LENMIWVEKG LRELASLKVQ EAVAFVMAQN RRNTSSKFFV SDEVKMPMDG
701: QFEAFELSDE EVEDVNFKQA WLSYFWRRAK NHEIESDLVD ERLQYWINQG TRSATSQDAV DVERGLMELR KLNIESQLWQ KSRKGLDHES NPSHLELSF
Arabidopsis Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G48860.2); Has 1487 Blast hits to 747 proteins in 184 species: Archae - 0; Bacteria - 56; Metazoa - 305; Fungi - 197; Plants - 180; Viruses - 3; Other Eukaryotes - /.../source: NCBI BLink). [Source:TAIR;Acc:AT4G08630]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.