Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 5
- plastid 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
KXG21299 | Sorghum | mitochondrion | 81.18 | 47.83 |
VIT_14s0030g00770.t01 | Wine grape | cytosol | 5.0 | 32.69 |
TraesCS1D01G093800.1 | Wheat | plastid | 45.0 | 28.54 |
TraesCS1B01G112600.1 | Wheat | plastid | 44.41 | 28.17 |
TraesCS1A01G102200.1 | Wheat | nucleus, plastid | 27.65 | 24.61 |
VIT_14s0030g00780.t01 | Wine grape | cytosol | 7.35 | 16.67 |
GSMUA_Achr2P01550_001 | Banana | cytosol | 17.65 | 16.17 |
KRG96906 | Soybean | nucleus, plastid | 29.12 | 15.49 |
KRH68645 | Soybean | nucleus, plastid | 29.71 | 15.4 |
Bra039472.1-P | Field mustard | plastid | 27.06 | 11.76 |
Solyc10g037930.1.1 | Tomato | cytosol | 5.29 | 11.18 |
CDY41922 | Canola | plastid | 26.18 | 11.15 |
CDY27806 | Canola | plastid | 25.59 | 11.14 |
AT4G08630.1 | Thale cress | plastid | 26.18 | 11.12 |
Zm00001d049273_P001 | Maize | nucleus | 20.59 | 9.79 |
PGSC0003DMT400067804 | Potato | cytosol | 5.29 | 8.26 |
VIT_14s0030g00800.t01 | Wine grape | cytosol, plastid | 1.76 | 5.41 |
Protein Annotations
EnsemblPlants:Zm00001d024833_P001 | EnsemblPlants:Zm00001d024833_T001 | EnsemblPlantsGene:Zm00001d024833 | ncoils:Coil | PANTHER:PTHR31762 | PANTHER:PTHR31762:SF4 |
ProteinID:AQK42155.1 | SEG:seg | UniParc:UPI0008453AAF | UniProt:A0A1D6J287 | MapMan:35.2 | : |
Description
No Description!
Coordinates
chr10:+:90185901..90195209
Molecular Weight (calculated)
35876.0 Da
IEP (calculated)
10.097
GRAVY (calculated)
-0.611
Length
340 amino acids
Sequence
(BLAST)
(BLAST)
001: MDRLARPASP GGGGLGYASR RGLYAQASSH HLAGGSAQTS PGGSPKELSP VHRHARAGSL GGAGAASTAG RRAGVGAGAG ARAQNSAARA AAQRLARVMG
101: GAGGDAGSGS DDDDDYELSG PPIELSNTPR RTSTRSPSPS VGRHLADQTQ VGRPPSLTNR YTAGKSVPMI PSIKRPATSG PGAGAGSESP MPNRREQRRS
201: VDLGSSLRAR RTSSSLNDEI NTLQVENESM YDKLQLAEER FDDGDAKSMH MEREDSDAGD AAETEPILIN RKDAALEQRK IAMRIASRRS SSASCNEIAT
301: LKSEAKEEVV LKRCWLARYW TLCSKLGIKI TFALFILLYY
101: GAGGDAGSGS DDDDDYELSG PPIELSNTPR RTSTRSPSPS VGRHLADQTQ VGRPPSLTNR YTAGKSVPMI PSIKRPATSG PGAGAGSESP MPNRREQRRS
201: VDLGSSLRAR RTSSSLNDEI NTLQVENESM YDKLQLAEER FDDGDAKSMH MEREDSDAGD AAETEPILIN RKDAALEQRK IAMRIASRRS SSASCNEIAT
301: LKSEAKEEVV LKRCWLARYW TLCSKLGIKI TFALFILLYY
001: MRNTRPIHVR NKSTEPGTPS SPMMTSPLMH RHTRSGSNAG PASNAKKAQT KAAAQRLAAV MSNQTGDEED SDEDLSFDYN AIGTGSIGLA AGRSHPSRSP
101: VIRNPMARRQ QMATPQLVDE DNEDDDFSVD VTSSRPSIGL PGGRAMRPQS PVMTKIAPPR RTQPTNEGNK NDGNDDDDVV SIDYTIGRPS IGLGSGRAMR
201: PQSSMNKTQP QGRPVMAAHQ RADEDNEDDE TPYVYTSSIP SVGLPGGRAA RSRSPLTKNP PLRHPHAVAQ PPSNGESDVD YDESYTSGMP SIGLAGGRSM
301: RPRTPLSIRT KEQPQTGLPT SGSRSSLYED STESSAMSTL THPSQTTNQV EQSPSARSAI SNKSSQSLSA MDQPPSARSS FNGRPIRTAP LMPSSVPISL
401: KPVTPAFQSN TPTNLRKDKR FSMDLGSSGN LRELGSQRST SALQDEVDML QEENESLLEK LRLAEDKCEE ADARAKQLEK QVEILGEGVT MDARLLSRKE
501: AALQQREAAL RIASQNHGGK REDVSALHTE AEIAREEAAS SLDQLHEVEL ELNSLKTVTK RLILTQEEME EVVLKRCWLS RYWGLCVRHG IQPDIAGGKH
601: EYWSSFAPLP LEIVLSAGQR ARDGVSQSNN TYGEREKSLQ NLQETSGEGN LENMIWVEKG LRELASLKVQ EAVAFVMAQN RRNTSSKFFV SDEVKMPMDG
701: QFEAFELSDE EVEDVNFKQA WLSYFWRRAK NHEIESDLVD ERLQYWINQG TRSATSQDAV DVERGLMELR KLNIESQLWQ KSRKGLDHES NPSHLELSF
101: VIRNPMARRQ QMATPQLVDE DNEDDDFSVD VTSSRPSIGL PGGRAMRPQS PVMTKIAPPR RTQPTNEGNK NDGNDDDDVV SIDYTIGRPS IGLGSGRAMR
201: PQSSMNKTQP QGRPVMAAHQ RADEDNEDDE TPYVYTSSIP SVGLPGGRAA RSRSPLTKNP PLRHPHAVAQ PPSNGESDVD YDESYTSGMP SIGLAGGRSM
301: RPRTPLSIRT KEQPQTGLPT SGSRSSLYED STESSAMSTL THPSQTTNQV EQSPSARSAI SNKSSQSLSA MDQPPSARSS FNGRPIRTAP LMPSSVPISL
401: KPVTPAFQSN TPTNLRKDKR FSMDLGSSGN LRELGSQRST SALQDEVDML QEENESLLEK LRLAEDKCEE ADARAKQLEK QVEILGEGVT MDARLLSRKE
501: AALQQREAAL RIASQNHGGK REDVSALHTE AEIAREEAAS SLDQLHEVEL ELNSLKTVTK RLILTQEEME EVVLKRCWLS RYWGLCVRHG IQPDIAGGKH
601: EYWSSFAPLP LEIVLSAGQR ARDGVSQSNN TYGEREKSLQ NLQETSGEGN LENMIWVEKG LRELASLKVQ EAVAFVMAQN RRNTSSKFFV SDEVKMPMDG
701: QFEAFELSDE EVEDVNFKQA WLSYFWRRAK NHEIESDLVD ERLQYWINQG TRSATSQDAV DVERGLMELR KLNIESQLWQ KSRKGLDHES NPSHLELSF
Arabidopsis Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G48860.2); Has 1487 Blast hits to 747 proteins in 184 species: Archae - 0; Bacteria - 56; Metazoa - 305; Fungi - 197; Plants - 180; Viruses - 3; Other Eukaryotes - /.../source: NCBI BLink). [Source:TAIR;Acc:AT4G08630]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.