Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH68645 | Soybean | nucleus, plastid | 83.57 | 81.4 |
| Solyc10g037930.1.1 | Tomato | cytosol | 12.52 | 49.69 |
| GSMUA_Achr2P01550_001 | Banana | cytosol | 28.8 | 49.6 |
| KRG93140 | Soybean | plastid | 38.65 | 46.87 |
| KRH36369 | Soybean | nucleus, plastid | 37.72 | 45.56 |
| KRH54118 | Soybean | endoplasmic reticulum | 40.53 | 44.97 |
| KRH63847 | Soybean | endoplasmic reticulum, nucleus | 40.38 | 44.79 |
| TraesCS1A01G102200.1 | Wheat | nucleus, plastid | 24.73 | 41.36 |
| VIT_14s0030g00800.t01 | Wine grape | cytosol, plastid | 7.04 | 40.54 |
| PGSC0003DMT400067804 | Potato | cytosol | 13.77 | 40.37 |
| TraesCS1B01G112600.1 | Wheat | plastid | 30.2 | 36.01 |
| TraesCS1D01G093800.1 | Wheat | plastid | 30.2 | 36.01 |
| VIT_14s0030g00780.t01 | Wine grape | cytosol | 7.98 | 34.0 |
| KXG21299 | Sorghum | mitochondrion | 30.2 | 33.45 |
| CDY41922 | Canola | plastid | 38.03 | 30.45 |
| Bra039472.1-P | Field mustard | plastid | 37.09 | 30.31 |
| AT4G08630.1 | Thale cress | plastid | 37.87 | 30.25 |
| CDY27806 | Canola | plastid | 36.78 | 30.09 |
| Zm00001d024833_P001 | Maize | mitochondrion | 15.49 | 29.12 |
Protein Annotations
| EMBL:ACUP02012169 | EnsemblPlants:KRG96906 | EnsemblPlantsGene:GLYMA_19G240300 | ncoils:Coil | PANTHER:PTHR31762 | PANTHER:PTHR31762:SF3 |
| ProteinID:KRG96906 | ProteinID:KRG96906.1 | SEG:seg | UniParc:UPI0006ED7F3A | UniProt:A0A0R0F2Y8 | MapMan:22.5.7.1.2 |
Description
hypothetical protein
Coordinates
chr19:+:48817084..48826326
Molecular Weight (calculated)
70907.1 Da
IEP (calculated)
5.119
GRAVY (calculated)
-0.744
Length
639 amino acids
Sequence
(BLAST)
(BLAST)
001: MDRRRMYDRQ NSSPGTPSSP SSPVNVISPL HRHARAGSTG SAMTNVRRAQ NNATKAAAQR LAQVMSQTDD DDEDEDDVPL DYSAIAGSGG IGLGGGRPMP
101: TRSPMPVRAV QEQPPSARSR SPASVRSVQE QPPSARSRSP ASVRIDQEQP RSVRGMSSVR SYASSNALAE QPPPRTPTLM NNAEQQPPSA RSTPANRTLE
201: LSPSARTTII TRSPQPSSAN NDQPPSARST SGRPSGLSKV VPMVPPSVPI TLRPASSVGV PPSEPLLDIR KDKRLSLDLG SMKVRENANQ QQRPTSHELE
301: DELDMLQEEN DNLVDKLRLA EEKYEEAESR VRQLEQQVAT LGEGVTLEAH LLSRQAALQQ REAALRNASK NHGGFQAALQ ADAETAREET ESAFEKLRLM
401: TQRMILTPEE MEEVVLKRCW LARYWGLCVR HGIHADIAEA KYKYWSMLAP NPIEVVLAAA EKAKEETDLD VEDTEGQRDL KELSGEGNIE NMLFVEQGLR
501: QLASLKVEEA LVVALAQHRR PNMLKAGFSD DLKLPIEGQC DAFELSQEEA EDVSFKQAWL AYIWRRAKRH EIEPDIANER LQHWINHNSM TPTSQDAVDV
601: ERGLAEIKRL DIEAQLWDES RRELEEEIGN SNIPGRSDF
101: TRSPMPVRAV QEQPPSARSR SPASVRSVQE QPPSARSRSP ASVRIDQEQP RSVRGMSSVR SYASSNALAE QPPPRTPTLM NNAEQQPPSA RSTPANRTLE
201: LSPSARTTII TRSPQPSSAN NDQPPSARST SGRPSGLSKV VPMVPPSVPI TLRPASSVGV PPSEPLLDIR KDKRLSLDLG SMKVRENANQ QQRPTSHELE
301: DELDMLQEEN DNLVDKLRLA EEKYEEAESR VRQLEQQVAT LGEGVTLEAH LLSRQAALQQ REAALRNASK NHGGFQAALQ ADAETAREET ESAFEKLRLM
401: TQRMILTPEE MEEVVLKRCW LARYWGLCVR HGIHADIAEA KYKYWSMLAP NPIEVVLAAA EKAKEETDLD VEDTEGQRDL KELSGEGNIE NMLFVEQGLR
501: QLASLKVEEA LVVALAQHRR PNMLKAGFSD DLKLPIEGQC DAFELSQEEA EDVSFKQAWL AYIWRRAKRH EIEPDIANER LQHWINHNSM TPTSQDAVDV
601: ERGLAEIKRL DIEAQLWDES RRELEEEIGN SNIPGRSDF
001: MRNTRPIHVR NKSTEPGTPS SPMMTSPLMH RHTRSGSNAG PASNAKKAQT KAAAQRLAAV MSNQTGDEED SDEDLSFDYN AIGTGSIGLA AGRSHPSRSP
101: VIRNPMARRQ QMATPQLVDE DNEDDDFSVD VTSSRPSIGL PGGRAMRPQS PVMTKIAPPR RTQPTNEGNK NDGNDDDDVV SIDYTIGRPS IGLGSGRAMR
201: PQSSMNKTQP QGRPVMAAHQ RADEDNEDDE TPYVYTSSIP SVGLPGGRAA RSRSPLTKNP PLRHPHAVAQ PPSNGESDVD YDESYTSGMP SIGLAGGRSM
301: RPRTPLSIRT KEQPQTGLPT SGSRSSLYED STESSAMSTL THPSQTTNQV EQSPSARSAI SNKSSQSLSA MDQPPSARSS FNGRPIRTAP LMPSSVPISL
401: KPVTPAFQSN TPTNLRKDKR FSMDLGSSGN LRELGSQRST SALQDEVDML QEENESLLEK LRLAEDKCEE ADARAKQLEK QVEILGEGVT MDARLLSRKE
501: AALQQREAAL RIASQNHGGK REDVSALHTE AEIAREEAAS SLDQLHEVEL ELNSLKTVTK RLILTQEEME EVVLKRCWLS RYWGLCVRHG IQPDIAGGKH
601: EYWSSFAPLP LEIVLSAGQR ARDGVSQSNN TYGEREKSLQ NLQETSGEGN LENMIWVEKG LRELASLKVQ EAVAFVMAQN RRNTSSKFFV SDEVKMPMDG
701: QFEAFELSDE EVEDVNFKQA WLSYFWRRAK NHEIESDLVD ERLQYWINQG TRSATSQDAV DVERGLMELR KLNIESQLWQ KSRKGLDHES NPSHLELSF
101: VIRNPMARRQ QMATPQLVDE DNEDDDFSVD VTSSRPSIGL PGGRAMRPQS PVMTKIAPPR RTQPTNEGNK NDGNDDDDVV SIDYTIGRPS IGLGSGRAMR
201: PQSSMNKTQP QGRPVMAAHQ RADEDNEDDE TPYVYTSSIP SVGLPGGRAA RSRSPLTKNP PLRHPHAVAQ PPSNGESDVD YDESYTSGMP SIGLAGGRSM
301: RPRTPLSIRT KEQPQTGLPT SGSRSSLYED STESSAMSTL THPSQTTNQV EQSPSARSAI SNKSSQSLSA MDQPPSARSS FNGRPIRTAP LMPSSVPISL
401: KPVTPAFQSN TPTNLRKDKR FSMDLGSSGN LRELGSQRST SALQDEVDML QEENESLLEK LRLAEDKCEE ADARAKQLEK QVEILGEGVT MDARLLSRKE
501: AALQQREAAL RIASQNHGGK REDVSALHTE AEIAREEAAS SLDQLHEVEL ELNSLKTVTK RLILTQEEME EVVLKRCWLS RYWGLCVRHG IQPDIAGGKH
601: EYWSSFAPLP LEIVLSAGQR ARDGVSQSNN TYGEREKSLQ NLQETSGEGN LENMIWVEKG LRELASLKVQ EAVAFVMAQN RRNTSSKFFV SDEVKMPMDG
701: QFEAFELSDE EVEDVNFKQA WLSYFWRRAK NHEIESDLVD ERLQYWINQG TRSATSQDAV DVERGLMELR KLNIESQLWQ KSRKGLDHES NPSHLELSF
Arabidopsis Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G48860.2); Has 1487 Blast hits to 747 proteins in 184 species: Archae - 0; Bacteria - 56; Metazoa - 305; Fungi - 197; Plants - 180; Viruses - 3; Other Eukaryotes - /.../source: NCBI BLink). [Source:TAIR;Acc:AT4G08630]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.