Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 4
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d024833_P001 | Maize | mitochondrion | 47.83 | 81.18 |
| TraesCS1A01G102200.1 | Wheat | nucleus, plastid | 44.37 | 67.02 |
| TraesCS1D01G093800.1 | Wheat | plastid | 56.15 | 60.45 |
| TraesCS1B01G112600.1 | Wheat | plastid | 55.63 | 59.89 |
| Solyc10g037930.1.1 | Tomato | cytosol | 13.86 | 49.69 |
| GSMUA_Achr2P01550_001 | Banana | cytosol | 31.89 | 49.6 |
| PGSC0003DMT400067804 | Potato | cytosol | 14.9 | 39.45 |
| EES04143 | Sorghum | plastid | 34.84 | 35.77 |
| VIT_14s0030g00770.t01 | Wine grape | cytosol | 3.12 | 34.62 |
| KRG96906 | Soybean | nucleus, plastid | 33.45 | 30.2 |
| KRH68645 | Soybean | nucleus, plastid | 34.14 | 30.03 |
| VIT_14s0030g00800.t01 | Wine grape | cytosol, plastid | 5.72 | 29.73 |
| VIT_14s0030g00780.t01 | Wine grape | cytosol | 7.45 | 28.67 |
| Bra039472.1-P | Field mustard | plastid | 33.62 | 24.81 |
| CDY27806 | Canola | plastid | 33.1 | 24.46 |
| CDY41922 | Canola | plastid | 33.8 | 24.44 |
| AT4G08630.1 | Thale cress | plastid | 33.62 | 24.25 |
| EES08547 | Sorghum | nucleus | 28.77 | 20.0 |
Protein Annotations
| EnsemblPlants:KXG21299 | EnsemblPlantsGene:SORBI_3009G042800 | ncoils:Coil | PANTHER:PTHR31762 | ProteinID:KXG21299 | ProteinID:KXG21299.1 |
| SEG:seg | UniParc:UPI00081ADEFC | UniProt:A0A1B6P6G6 | MapMan:22.5.7.1.2 | : | : |
Description
hypothetical protein
Coordinates
chr9:+:4079957..4087262
Molecular Weight (calculated)
62121.3 Da
IEP (calculated)
6.856
GRAVY (calculated)
-0.708
Length
577 amino acids
Sequence
(BLAST)
(BLAST)
001: MDRLSRPASP GGGGLGYASR RGLYAQTASH HHQAGGGSAQ TSPGGSPKEL SPVHRHARAG SLGGAGTAST AGRRAGVGTG AGAGARAQNA RAAAQRLARV
101: MGGAGGDGGS GSDDDDDGYE LSGPPIELSN TPRRTSTRSP SPSIGRYLAD QTQVGRPPSL TNRYTAGKSV PMIPSIKRPA TSGAGAGAGA GAGSESPMPN
201: RREQRRSVDL GSSLRGRRTS PSPNDEINTL QVESESMYDK LQLAEERSDD GDAKSMHMER EDSDIGDAVE TEPILISRKD AALEQRKIAM RIASRRSSSA
301: SCNEIATLKS EAKVTSNVTS VPRRMKSARS ELRSLQATAN RMILSQEELE EVVLKRCWLA RYWTLCSKLG IHSDIAEDKK EYWSSFAPRA LEAVLSIGQK
401: ARDGTLSDNA DMESRSKMSD VNDISSDGNV ETMLSVEKGL RELASLKVED AIMLTLAENR HIKPLSGQAS EGRSPSESLE LSADEREDVR FKQAWLTYFW
501: RRAKNHNIEE DIADERLQFW IEQINHPVTT SDVIEVERGL HELKKLGIES HLWDATRKAQ ALDDDLSNHG SPTGSEA
101: MGGAGGDGGS GSDDDDDGYE LSGPPIELSN TPRRTSTRSP SPSIGRYLAD QTQVGRPPSL TNRYTAGKSV PMIPSIKRPA TSGAGAGAGA GAGSESPMPN
201: RREQRRSVDL GSSLRGRRTS PSPNDEINTL QVESESMYDK LQLAEERSDD GDAKSMHMER EDSDIGDAVE TEPILISRKD AALEQRKIAM RIASRRSSSA
301: SCNEIATLKS EAKVTSNVTS VPRRMKSARS ELRSLQATAN RMILSQEELE EVVLKRCWLA RYWTLCSKLG IHSDIAEDKK EYWSSFAPRA LEAVLSIGQK
401: ARDGTLSDNA DMESRSKMSD VNDISSDGNV ETMLSVEKGL RELASLKVED AIMLTLAENR HIKPLSGQAS EGRSPSESLE LSADEREDVR FKQAWLTYFW
501: RRAKNHNIEE DIADERLQFW IEQINHPVTT SDVIEVERGL HELKKLGIES HLWDATRKAQ ALDDDLSNHG SPTGSEA
001: MRNTRPIHVR NKSTEPGTPS SPMMTSPLMH RHTRSGSNAG PASNAKKAQT KAAAQRLAAV MSNQTGDEED SDEDLSFDYN AIGTGSIGLA AGRSHPSRSP
101: VIRNPMARRQ QMATPQLVDE DNEDDDFSVD VTSSRPSIGL PGGRAMRPQS PVMTKIAPPR RTQPTNEGNK NDGNDDDDVV SIDYTIGRPS IGLGSGRAMR
201: PQSSMNKTQP QGRPVMAAHQ RADEDNEDDE TPYVYTSSIP SVGLPGGRAA RSRSPLTKNP PLRHPHAVAQ PPSNGESDVD YDESYTSGMP SIGLAGGRSM
301: RPRTPLSIRT KEQPQTGLPT SGSRSSLYED STESSAMSTL THPSQTTNQV EQSPSARSAI SNKSSQSLSA MDQPPSARSS FNGRPIRTAP LMPSSVPISL
401: KPVTPAFQSN TPTNLRKDKR FSMDLGSSGN LRELGSQRST SALQDEVDML QEENESLLEK LRLAEDKCEE ADARAKQLEK QVEILGEGVT MDARLLSRKE
501: AALQQREAAL RIASQNHGGK REDVSALHTE AEIAREEAAS SLDQLHEVEL ELNSLKTVTK RLILTQEEME EVVLKRCWLS RYWGLCVRHG IQPDIAGGKH
601: EYWSSFAPLP LEIVLSAGQR ARDGVSQSNN TYGEREKSLQ NLQETSGEGN LENMIWVEKG LRELASLKVQ EAVAFVMAQN RRNTSSKFFV SDEVKMPMDG
701: QFEAFELSDE EVEDVNFKQA WLSYFWRRAK NHEIESDLVD ERLQYWINQG TRSATSQDAV DVERGLMELR KLNIESQLWQ KSRKGLDHES NPSHLELSF
101: VIRNPMARRQ QMATPQLVDE DNEDDDFSVD VTSSRPSIGL PGGRAMRPQS PVMTKIAPPR RTQPTNEGNK NDGNDDDDVV SIDYTIGRPS IGLGSGRAMR
201: PQSSMNKTQP QGRPVMAAHQ RADEDNEDDE TPYVYTSSIP SVGLPGGRAA RSRSPLTKNP PLRHPHAVAQ PPSNGESDVD YDESYTSGMP SIGLAGGRSM
301: RPRTPLSIRT KEQPQTGLPT SGSRSSLYED STESSAMSTL THPSQTTNQV EQSPSARSAI SNKSSQSLSA MDQPPSARSS FNGRPIRTAP LMPSSVPISL
401: KPVTPAFQSN TPTNLRKDKR FSMDLGSSGN LRELGSQRST SALQDEVDML QEENESLLEK LRLAEDKCEE ADARAKQLEK QVEILGEGVT MDARLLSRKE
501: AALQQREAAL RIASQNHGGK REDVSALHTE AEIAREEAAS SLDQLHEVEL ELNSLKTVTK RLILTQEEME EVVLKRCWLS RYWGLCVRHG IQPDIAGGKH
601: EYWSSFAPLP LEIVLSAGQR ARDGVSQSNN TYGEREKSLQ NLQETSGEGN LENMIWVEKG LRELASLKVQ EAVAFVMAQN RRNTSSKFFV SDEVKMPMDG
701: QFEAFELSDE EVEDVNFKQA WLSYFWRRAK NHEIESDLVD ERLQYWINQG TRSATSQDAV DVERGLMELR KLNIESQLWQ KSRKGLDHES NPSHLELSF
Arabidopsis Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G48860.2); Has 1487 Blast hits to 747 proteins in 184 species: Archae - 0; Bacteria - 56; Metazoa - 305; Fungi - 197; Plants - 180; Viruses - 3; Other Eukaryotes - /.../source: NCBI BLink). [Source:TAIR;Acc:AT4G08630]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.