Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr2P01550_001 | Banana | cytosol | 73.08 | 10.24 |
| VIT_17s0000g00390.t01 | Wine grape | mitochondrion, plastid | 78.85 | 7.18 |
| VIT_01s0244g00070.t01 | Wine grape | nucleus, plastid | 73.08 | 6.87 |
| Zm00001d024833_P001 | Maize | mitochondrion | 32.69 | 5.0 |
| AT4G08630.1 | Thale cress | plastid | 75.0 | 4.88 |
| CDY41922 | Canola | plastid | 73.08 | 4.76 |
| TraesCS1A01G102200.1 | Wheat | nucleus, plastid | 32.69 | 4.45 |
| TraesCS1B01G112600.1 | Wheat | plastid | 38.46 | 3.73 |
| TraesCS1D01G093800.1 | Wheat | plastid | 38.46 | 3.73 |
| CDY27806 | Canola | plastid | 55.77 | 3.71 |
| Bra039472.1-P | Field mustard | plastid | 55.77 | 3.71 |
| KXG21299 | Sorghum | mitochondrion | 34.62 | 3.12 |
| VIT_14s0030g00800.t01 | Wine grape | cytosol, plastid | 3.85 | 1.8 |
| VIT_14s0030g00780.t01 | Wine grape | cytosol | 3.85 | 1.33 |
Protein Annotations
| ArrayExpress:VIT_14s0030g00770 | EMBL:FN596249 | EnsemblPlants:VIT_14s0030g00770.t01 | EnsemblPlantsGene:VIT_14s0030g00770 | ncoils:Coil | PANTHER:PTHR31762 |
| ProteinID:CBI34286 | ProteinID:CBI34286.3 | SEG:seg | UniParc:UPI0001BE4330 | UniProt:D7TUW1 | MapMan:35.2 |
Description
No Description!
Coordinates
chr14:+:4999446..5000880
Molecular Weight (calculated)
5912.0 Da
IEP (calculated)
4.422
GRAVY (calculated)
-0.662
Length
52 amino acids
Sequence
(BLAST)
(BLAST)
1: MVQEENESLL EKLRLAEERC EEAEARARQL EKQVATLGEG VSLEARLLSR QA
001: MRNTRPIHVR NKSTEPGTPS SPMMTSPLMH RHTRSGSNAG PASNAKKAQT KAAAQRLAAV MSNQTGDEED SDEDLSFDYN AIGTGSIGLA AGRSHPSRSP
101: VIRNPMARRQ QMATPQLVDE DNEDDDFSVD VTSSRPSIGL PGGRAMRPQS PVMTKIAPPR RTQPTNEGNK NDGNDDDDVV SIDYTIGRPS IGLGSGRAMR
201: PQSSMNKTQP QGRPVMAAHQ RADEDNEDDE TPYVYTSSIP SVGLPGGRAA RSRSPLTKNP PLRHPHAVAQ PPSNGESDVD YDESYTSGMP SIGLAGGRSM
301: RPRTPLSIRT KEQPQTGLPT SGSRSSLYED STESSAMSTL THPSQTTNQV EQSPSARSAI SNKSSQSLSA MDQPPSARSS FNGRPIRTAP LMPSSVPISL
401: KPVTPAFQSN TPTNLRKDKR FSMDLGSSGN LRELGSQRST SALQDEVDML QEENESLLEK LRLAEDKCEE ADARAKQLEK QVEILGEGVT MDARLLSRKE
501: AALQQREAAL RIASQNHGGK REDVSALHTE AEIAREEAAS SLDQLHEVEL ELNSLKTVTK RLILTQEEME EVVLKRCWLS RYWGLCVRHG IQPDIAGGKH
601: EYWSSFAPLP LEIVLSAGQR ARDGVSQSNN TYGEREKSLQ NLQETSGEGN LENMIWVEKG LRELASLKVQ EAVAFVMAQN RRNTSSKFFV SDEVKMPMDG
701: QFEAFELSDE EVEDVNFKQA WLSYFWRRAK NHEIESDLVD ERLQYWINQG TRSATSQDAV DVERGLMELR KLNIESQLWQ KSRKGLDHES NPSHLELSF
101: VIRNPMARRQ QMATPQLVDE DNEDDDFSVD VTSSRPSIGL PGGRAMRPQS PVMTKIAPPR RTQPTNEGNK NDGNDDDDVV SIDYTIGRPS IGLGSGRAMR
201: PQSSMNKTQP QGRPVMAAHQ RADEDNEDDE TPYVYTSSIP SVGLPGGRAA RSRSPLTKNP PLRHPHAVAQ PPSNGESDVD YDESYTSGMP SIGLAGGRSM
301: RPRTPLSIRT KEQPQTGLPT SGSRSSLYED STESSAMSTL THPSQTTNQV EQSPSARSAI SNKSSQSLSA MDQPPSARSS FNGRPIRTAP LMPSSVPISL
401: KPVTPAFQSN TPTNLRKDKR FSMDLGSSGN LRELGSQRST SALQDEVDML QEENESLLEK LRLAEDKCEE ADARAKQLEK QVEILGEGVT MDARLLSRKE
501: AALQQREAAL RIASQNHGGK REDVSALHTE AEIAREEAAS SLDQLHEVEL ELNSLKTVTK RLILTQEEME EVVLKRCWLS RYWGLCVRHG IQPDIAGGKH
601: EYWSSFAPLP LEIVLSAGQR ARDGVSQSNN TYGEREKSLQ NLQETSGEGN LENMIWVEKG LRELASLKVQ EAVAFVMAQN RRNTSSKFFV SDEVKMPMDG
701: QFEAFELSDE EVEDVNFKQA WLSYFWRRAK NHEIESDLVD ERLQYWINQG TRSATSQDAV DVERGLMELR KLNIESQLWQ KSRKGLDHES NPSHLELSF
Arabidopsis Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G48860.2); Has 1487 Blast hits to 747 proteins in 184 species: Archae - 0; Bacteria - 56; Metazoa - 305; Fungi - 197; Plants - 180; Viruses - 3; Other Eukaryotes - /.../source: NCBI BLink). [Source:TAIR;Acc:AT4G08630]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.