CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 4
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY41922	Canola	plastid	92.57	90.6
Bra039472.1-P	Field mustard	plastid	87.32	87.21
AT4G08630.1	Thale cress	plastid	74.26	72.5
VIT_14s0030g00770.t01	Wine grape	cytosol	3.71	55.77
GSMUA_Achr2P01550_001	Banana	cytosol	24.97	52.56
Solyc10g037930.1.1	Tomato	cytosol	10.12	49.07
CDY64711	Canola	cytosol	17.29	46.23
TraesCS1A01G102200.1	Wheat	nucleus, plastid	22.28	45.55
CDX68503	Canola	nucleus	4.23	42.86
CDX88044	Canola	mitochondrion	28.04	40.41
CDX80382	Canola	mitochondrion	27.91	40.15
PGSC0003DMT400067804	Potato	cytosol	10.88	38.99
CDY05877	Canola	nucleus, plastid	28.3	38.98
CDY09779	Canola	nucleus, plastid	26.12	37.92
CDX69654	Canola	nucleus, plastid	26.12	37.71
KRG96906	Soybean	nucleus, plastid	30.09	36.78
KRH68645	Soybean	nucleus, plastid	30.47	36.28
TraesCS1D01G093800.1	Wheat	plastid	24.58	35.82
TraesCS1B01G112600.1	Wheat	plastid	24.58	35.82
KXG21299	Sorghum	mitochondrion	24.46	33.1
CDY70607	Canola	nucleus	9.48	31.62
CDY03383	Canola	nucleus, plastid	25.61	30.63
CDY34338	Canola	nucleus, plastid	24.58	29.49
Zm00001d024833_P001	Maize	mitochondrion	11.14	25.59

Protein Annotations

EnsemblPlants:CDY27806	EnsemblPlantsGene:GSBRNA2T00038614001	ncoils:Coil	PANTHER:PTHR31762	PANTHER:PTHR31762:SF3	ProteinID:CDY27806
ProteinID:CDY27806.1	SEG:seg	UniParc:UPI0004EF0C4D	UniProt:A0A078GQV1	MapMan:22.5.7.1.2	:

Description

BnaA05g32150DBnaA05g32150D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GQV1]

Coordinates

chrLK032209:+:521401..525769

Molecular Weight (calculated)

86175.5 Da

IEP (calculated)

5.858

GRAVY (calculated)

-0.742

Length

781 amino acids

Sequence
(BLAST)

001: MRPVHARNQT TDPSSPMMTS PLMNRHARTG SNAGPASNAK KAQTKAAAQR LAAVMSNQTG DDEDSDDDLS FDYNAVGSIG LAAGRSHPSR SPMIKKPVAR
101: RPQMGTPQLA DDDNEDDDFS VDVSSGRPSI GLSGGRAIRP KSPVVTKIAP PRRTQPVNED KKKDDDDDDD DVVSVDYTIG RPSIGLGSGR TMRPQASMNK
201: VQPQGRPVMA VQPTDEENED DEAPYVYTSG VPSVGLAGGR AARSRSPLKK TPPLRHPQVI AQPPSSGDSD ADYDEAYTSV MPSIGLAGGR SMKPRTPLSI
301: RTKEQPQTGV PSSGNRSSFG EDSTLPQTTT NQVDHQSPSA RSAFSTKSSQ SLNAMDQPPS ARSSFSGRPI RTVPLMPSSV PISLKPVTPA FQSDTPTNLR
401: KDKSRFSIDL GSSGNLRELG SQRSTSALQD EVDMLQEENE SLLDKLRLAE DKCEEADARA KQLEKQVTRC FIEVPFLHTE AALQQREAAL KVASQTRGGK
501: REDVSALHTE AEIAREEAAS SLEQLHEVES ELNSLKTLTK RLILTQEEME EVVLKRCWLS RYWGLCVRHG RIQADIARAK HEYWSSFAPL PLEIVLSAGQ
601: RAREIVSRSN STLREREKSF QNLHETSGEG NVESMVWVEK GLRELAALKV QEAVAYVMAQ NRRNSSSKIF VSDEVKLPMD GQFEAFELSD DEVEDVSFKQ
701: AWLSYFWRRA KNHDIEADLA DERLQYWINQ GTRSATSQDA VDVERGLMEL RKLNIESQLW QKSRKGLDHE SNPSSHVELS F

Best Arabidopsis Sequence Match ( AT4G08630.1 )
(BLAST)

001: MRNTRPIHVR NKSTEPGTPS SPMMTSPLMH RHTRSGSNAG PASNAKKAQT KAAAQRLAAV MSNQTGDEED SDEDLSFDYN AIGTGSIGLA AGRSHPSRSP
101: VIRNPMARRQ QMATPQLVDE DNEDDDFSVD VTSSRPSIGL PGGRAMRPQS PVMTKIAPPR RTQPTNEGNK NDGNDDDDVV SIDYTIGRPS IGLGSGRAMR
201: PQSSMNKTQP QGRPVMAAHQ RADEDNEDDE TPYVYTSSIP SVGLPGGRAA RSRSPLTKNP PLRHPHAVAQ PPSNGESDVD YDESYTSGMP SIGLAGGRSM
301: RPRTPLSIRT KEQPQTGLPT SGSRSSLYED STESSAMSTL THPSQTTNQV EQSPSARSAI SNKSSQSLSA MDQPPSARSS FNGRPIRTAP LMPSSVPISL
401: KPVTPAFQSN TPTNLRKDKS RFSMDLGSSG NLRELGSQRS TSALQDEVDM LQEENESLLE KLRLAEDKCE EADARAKQLE KQVEILGEGV TMDARLLSRK
501: EAALQQREAA LRIASQNHGG KREDVSALHT EAEIAREEAA SSLDQLHEVE LELNSLKTVT KRLILTQEEM EEVVLKRCWL SRYWGLCVRH GIQPDIAGGK
601: HEYWSSFAPL PLEIVLSAGQ RARDGVSQSN NTYGEREKSL QNLQETSGEG NLENMIWVEK GLRELASLKV QEAVAFVMAQ NRRNTSSKFF VSDEVKMPMD
701: GQFEAFELSD EEVEDVNFKQ AWLSYFWRRA KNHEIESDLV DERLQYWINQ GTRSATSQDA VDVERGLMEL RKLNIESQLW QKSRKGLDHE SNPSHLELSF

Arabidopsis Description

unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G48860.2); Has 1487 Blast hits to 747 proteins in 184 species: Archae - 0; Bacteria - 56; Metazoa - 305; Fungi - 197; Plants - 180; Viruses - 3; Other Eukaryotes - /.../source: NCBI BLink). [Source:TAIR;Acc:AT4G08630]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.