CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

nucleus 3
plastid 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX69654	Canola	nucleus, plastid	95.72	95.19
Bra008842.1-P	Field mustard	nucleus, plastid	92.94	92.76
AT5G13260.1	Thale cress	plastid	77.7	77.84
KRG93140	Soybean	plastid	61.15	62.43
VIT_01s0244g00070.t01	Wine grape	nucleus, plastid	61.71	60.04
KRH36369	Soybean	nucleus, plastid	58.92	59.92
GSMUA_Achr4P00070_001	Banana	plastid	51.67	53.36
CDY64711	Canola	cytosol	28.25	52.05
EES04143	Sorghum	plastid	53.35	51.07
Os01t0928100-01	Rice	plasma membrane	53.53	50.53
TraesCS3B01G476100.1	Wheat	plastid	52.42	48.87
GSMUA_Achr9P01060_001	Banana	plastid	34.94	48.58
TraesCS3D01G435000.1	Wheat	plastid	52.04	48.53
TraesCS3A01G442300.2	Wheat	plastid	52.04	48.53
CDY05877	Canola	nucleus, plastid	50.74	48.15
CDX80382	Canola	mitochondrion	47.96	47.51
GSMUA_Achr9P01070_001	Banana	cytosol	16.91	47.4
CDX88044	Canola	mitochondrion	47.03	46.68
HORVU3Hr1G096450.1	Barley	plastid	52.04	46.51
CDX68503	Canola	nucleus	5.95	41.56
CDY03383	Canola	nucleus, plastid	43.12	35.53
CDY34338	Canola	nucleus, plastid	42.57	35.18
HORVU4Hr1G023390.10	Barley	cytosol, nucleus	40.52	30.19
Zm00001d049273_P001	Maize	nucleus	38.29	28.81
TraesCS4D01G120700.1	Wheat	nucleus	39.59	28.51
TraesCS4A01G192600.1	Wheat	nucleus	40.52	28.09
Os11t0520500-00	Rice	plasma membrane	36.06	28.03
CDY70607	Canola	nucleus	12.08	27.78
TraesCS4B01G122700.1	Wheat	nucleus	39.96	27.56
CDY41922	Canola	plastid	39.78	26.82
CDY27806	Canola	plastid	37.92	26.12
EES08547	Sorghum	nucleus	39.41	25.54

Protein Annotations

EnsemblPlants:CDY09779	EnsemblPlantsGene:GSBRNA2T00031481001	ncoils:Coil	PANTHER:PTHR31762	PANTHER:PTHR31762:SF5	ProteinID:CDY09779
ProteinID:CDY09779.1	SEG:seg	UniParc:UPI0004EF0E7B	UniProt:A0A078F9T6	MapMan:22.5.7.1.2	:

Description

BnaC09g43820DBnaC09g43820D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F9T6]

Coordinates

chrLK031999:+:67535..71250

Molecular Weight (calculated)

59926.5 Da

IEP (calculated)

5.995

GRAVY (calculated)

-0.663

Length

538 amino acids

Sequence
(BLAST)

001: MERARTESPS YFRQWNGDSI TPNAAAAPSS PARHHHARSS SVTGMSNVKR SQNVAAKAAA QRLAKVMASQ TTDDDEDEDD VGGDDLDFRY GAPPLSFTRN
101: NASTKPRPAA SAVLPPPKIG RSSSPAFSRN SPAVSVRASQ QPPVPPSKLS QRNQATVPLP VVTPRNQQTE KRALPEIGHL SAKDSKDQHE ASALQDELDM
201: LQEENESILE KLRLEDERCK EAEARVRELE KQVTSLGEGV SLEAKLLSRK EAALRQREAA LKDARQNREG ANKETTALRA QVESAKQEAA GVVAQLQVAE
301: SEVNALRTMT HRMILTPKEM EEVVLKRCWL ARYWGLAARY GICSDIATSK YEYWSSLAPL PFEIVLSAGQ KAKEESWEKD SEESEKRSQL VQDINDLTGE
401: GNIESMLSVE MGLKELASLK VEVSLTLTLA QLRLANTFRL SDPELKSPGG PKLLEALELS PEESEDVLFK EAWLTYFWRR ALSLGIDVDI ARERLQFWIS
501: RSAHSPSSHD AMEVEQGLTE LRKRRIERRL WEASRSNQ

Best Arabidopsis Sequence Match ( AT5G13260.1 )
(BLAST)

001: MERARTESPS YFRQWSGDSG TTNAAAVAPS SPARHHHARS SSVTNMSNVK RAQNVAAKAA AQRLAKVMAS QTNNDDDDDD DDDEVGGDDL GFRYGAPPPL
101: SFTRNPSSTI AKPKPVASSA VVPPPKISRS SSPANSPAVS VRASQPPVPP SKLRNQTTNP LPVATPKTEK RVLADIGHFN GKDSKDQHEA SALRDELDML
201: QEENDSILEK LRLEDEKCKE AEARVRELEK QVTSLGEGVS LEAKLLSRKE AALRQREAAL KDARQNRDGT NRETTALRSQ VETAKLETAA IVAQLQGAES
301: EVNGLRTMTH RMILTQKEME EVVLKRCWLA RYWGLASRYG ICSDIATSKY EYWSSLAPLP FEIVLSAGQK AKEESWEKES EENEKRSQLV QDINDLTGEG
401: NIESMLSVEM GLKELTSLKV EVAITITLAQ LRLANTTRLS DIELKSPGGP KITETLELSQ EESEDVLFKE AWLTYFWRRA QSLGIEVDTA RERLRFWISR
501: SAHSPSSHDA MEVEQGLTEL RKLRIERRLW EASRSSQ

Arabidopsis Description

Myosin [Source:UniProtKB/TrEMBL;Acc:Q8VZL1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.