Factsheet for Bra028253.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 8

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY00476	Canola	mitochondrion	91.93	91.93
Bra029174.1-P	Field mustard	mitochondrion	57.14	46.7
AT5G51440.1	Thale cress	mitochondrion	58.39	44.76
Bra013872.1-P	Field mustard	mitochondrion	52.8	39.91
KRH23958	Soybean	mitochondrion	46.58	35.38
KRH39841	Soybean	mitochondrion	32.3	35.37
TraesCS7D01G178900.1	Wheat	cytosol	26.71	35.25
GSMUA_Achr10P...	Banana	mitochondrion	46.58	34.72
VIT_16s0022g00510.t01	Wine grape	mitochondrion	44.72	34.62
Solyc08g078700.2.1	Tomato	plastid	41.61	31.9
PGSC0003DMT400012249	Potato	mitochondrion	40.99	31.28
Os02t0758000-01	Rice	plastid	41.61	30.45
TraesCS7B01G083300.1	Wheat	cytosol	24.84	30.08
OQU85385	Sorghum	mitochondrion	40.99	29.86
Zm00001d052194_P001	Maize	mitochondrion	39.13	28.9
TraesCS6B01G346700.1	Wheat	mitochondrion	37.89	28.37
TraesCS6A01G316200.1	Wheat	mitochondrion	37.89	28.37
TraesCS6D01G295500.1	Wheat	mitochondrion	37.27	27.78
OQU76071	Sorghum	plastid	32.3	25.74
HORVU7Hr1G036500.7	Barley	plastid	32.3	25.49
Zm00001d044874_P001	Maize	cytosol, plastid	32.92	25.48
TraesCS7A01G232500.1	Wheat	plastid	31.68	24.76
TraesCS7D01G179300.1	Wheat	plastid	32.3	24.53
TraesCS7B01G082900.1	Wheat	plastid	30.43	24.5
TraesCS7B01G083500.1	Wheat	mitochondrion	35.4	24.46
TraesCS7D01G179000.1	Wheat	plastid	32.3	24.41
TraesCS7B01G083100.1	Wheat	plastid	32.3	24.41
TraesCS7D01G179400.1	Wheat	plastid	31.68	24.29
TraesCS7D01G179100.1	Wheat	plastid	32.3	24.19
TraesCS7A01G177700.1	Wheat	cytosol, plastid	32.3	24.07
TraesCS7A01G177500.1	Wheat	cytosol, plastid	32.3	24.07
TraesCS7A01G236700.1	Wheat	plastid	31.68	24.06
TraesCS7D01G232600.1	Wheat	plastid	31.06	23.92
TraesCS7D01G179200.1	Wheat	cytosol, plastid	31.06	23.92
TraesCS7A01G177600.1	Wheat	plastid	31.68	23.72
TraesCS7D01G179500.1	Wheat	plastid	31.68	23.72
TraesCS7B01G083200.2	Wheat	plastid	32.3	23.53
EER89431	Sorghum	plastid	31.68	23.5
TraesCS7B01G083400.1	Wheat	plastid	31.06	23.47
EER89430	Sorghum	plastid	32.92	23.35
TraesCS2B01G531300.1	Wheat	plastid	25.47	23.3
TraesCS7D01G179600.1	Wheat	mitochondrion	33.54	23.08
OQU75930	Sorghum	plastid	31.06	22.42
OQU75612	Sorghum	plastid	31.06	22.42
HORVU7Hr1G036570.2	Barley	cytosol	30.43	22.17
HORVU6Hr1G077710.3	Barley	cytosol	35.4	20.88
KXG19616	Sorghum	plastid	34.78	20.82
HORVU7Hr1G036470.3	Barley	cytosol, nucleus	31.06	20.66
HORVU7Hr1G036540.3	Barley	mitochondrion, nucleus, plastid	32.3	20.16
TraesCS7B01G130900.1	Wheat	plastid	18.63	18.52
TraesCS7A01G177800.1	Wheat	nucleus	26.09	18.26
Os06t0219500-00	Rice	mitochondrion	31.68	16.5
TraesCS5B01G123900.1	Wheat	plastid	21.74	14.64

Protein Annotations

EnsemblPlants:Bra028253.1	EnsemblPlants:Bra028253.1-P	EnsemblPlantsGene:Bra028253	Gene3D:2.60.40.790	InterPro:A-crystallin/Hsp20_dom	InterPro:HSP20
InterPro:HSP20-like_chaperone	InterPro:IPR002068	InterPro:IPR008978	PANTHER:PTHR11527	PANTHER:PTHR11527:SF238	PFAM:PF00011
PFscan:PS01031	SUPFAM:SSF49764	UniParc:UPI0002543D7C	UniProt:M4EHI8	MapMan:35.1	:

Description

AT5G51440 (E=1e-033) | 23.5 kDa mitochondrial small heat shock protein (HSP23.5-M)

Coordinates

chrA01:-:19287810..19288378

Molecular Weight (calculated)

18051.8 Da

IEP (calculated)

6.363

GRAVY (calculated)

-0.275

Length

161 amino acids

Sequence
(BLAST)

001: MASTSRLAFT RLLSSTFVVP RPAAAYRLFS TKSGFYDLIT PAMSLSHVIQ SLEDEEEGPL VVATGGRLGW DVKDKENALH VRIDMPGLSR EDVKLSLEQD
101: TLVIKGEEHE EGRKFSSRIE LPQEEYKANE IKAEMKNGVL KVVVPKIIQL HLNNPLHIKV D

Best Arabidopsis Sequence Match ( AT5G51440.1 )
(BLAST)

001: MASSSALALR RLLSSSTVAV PRALRAVRPV AASSRLFNTN AARNYEDGVD RNHHSNRHVS RHGGDFFSHI LDPFTPTRSL SQMLNFMDQV SEIPLVSATR
101: GMGASGVRRG WNVKEKDDAL HLRIDMPGLS REDVKLALEQ NTLVIRGEGE TEEGEDVSGD GRRFTSRIEL PEKVYKTDEI KAEMKNGVLK VVIPKIKEDE
201: RNNIRHINVD

Arabidopsis Description

HSP23.523.5 kDa heat shock protein, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9FGM9]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.