CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra028253.1-P	Field mustard	mitochondrion	91.93	91.93
CDX99920	Canola	mitochondrion	86.34	86.88
CDY38862	Canola	mitochondrion	56.52	46.43
AT5G51440.1	Thale cress	mitochondrion	55.9	42.86
CDY32630	Canola	mitochondrion	44.72	42.35
CDX89437	Canola	mitochondrion	50.31	38.03
CDY03368	Canola	mitochondrion	49.69	37.56
VIT_16s0022g00510.t01	Wine grape	mitochondrion	48.45	37.5
KRH39841	Soybean	mitochondrion	34.16	37.41
KRH23958	Soybean	mitochondrion	47.2	35.85
GSMUA_Achr10P...	Banana	mitochondrion	47.2	35.19
TraesCS7D01G178900.1	Wheat	cytosol	26.09	34.43
Solyc08g078700.2.1	Tomato	plastid	42.86	32.86
PGSC0003DMT400012249	Potato	mitochondrion	42.24	32.23
Os02t0758000-01	Rice	plastid	43.48	31.82
OQU85385	Sorghum	mitochondrion	42.86	31.22
TraesCS7B01G083300.1	Wheat	cytosol	25.47	30.83
Zm00001d052194_P001	Maize	mitochondrion	40.99	30.28
TraesCS6B01G346700.1	Wheat	mitochondrion	39.13	29.3
TraesCS6A01G316200.1	Wheat	mitochondrion	39.13	29.3
TraesCS6D01G295500.1	Wheat	mitochondrion	38.51	28.7
HORVU7Hr1G036500.7	Barley	plastid	35.4	27.94
TraesCS7D01G179100.1	Wheat	plastid	36.65	27.44
TraesCS7D01G179400.1	Wheat	plastid	35.4	27.14
Zm00001d044874_P001	Maize	cytosol, plastid	34.78	26.92
TraesCS7D01G179300.1	Wheat	plastid	35.4	26.89
TraesCS7A01G177500.1	Wheat	cytosol, plastid	36.02	26.85
TraesCS7A01G177700.1	Wheat	cytosol, plastid	36.02	26.85
TraesCS7D01G232600.1	Wheat	plastid	34.78	26.79
TraesCS7D01G179200.1	Wheat	cytosol, plastid	34.78	26.79
TraesCS7B01G083100.1	Wheat	plastid	35.4	26.76
TraesCS7D01G179000.1	Wheat	plastid	35.4	26.76
TraesCS7D01G179500.1	Wheat	plastid	35.4	26.51
TraesCS7A01G177600.1	Wheat	plastid	35.4	26.51
TraesCS7B01G082900.1	Wheat	plastid	32.92	26.5
TraesCS7A01G236700.1	Wheat	plastid	34.78	26.42
TraesCS7B01G083400.1	Wheat	plastid	34.78	26.29
TraesCS7B01G083200.2	Wheat	plastid	36.02	26.24
OQU76071	Sorghum	plastid	32.92	26.24
TraesCS7A01G232500.1	Wheat	plastid	33.54	26.21
TraesCS7B01G083500.1	Wheat	mitochondrion	37.89	26.18
TraesCS7D01G179600.1	Wheat	mitochondrion	36.02	24.79
TraesCS2B01G531300.1	Wheat	plastid	26.71	24.43
EER89430	Sorghum	plastid	34.16	24.23
HORVU7Hr1G036570.2	Barley	cytosol	32.92	23.98
EER89431	Sorghum	plastid	31.68	23.5
OQU75930	Sorghum	plastid	31.68	22.87
OQU75612	Sorghum	plastid	31.68	22.87
HORVU7Hr1G036470.3	Barley	cytosol, nucleus	34.16	22.73
HORVU7Hr1G036540.3	Barley	mitochondrion, nucleus, plastid	36.02	22.48
TraesCS7B01G130900.1	Wheat	plastid	22.36	22.22
HORVU6Hr1G077710.3	Barley	cytosol	36.65	21.61
TraesCS7A01G177800.1	Wheat	nucleus	29.81	20.87
KXG19616	Sorghum	plastid	33.54	20.07
TraesCS5B01G123900.1	Wheat	plastid	24.84	16.74
Os06t0219500-00	Rice	mitochondrion	31.68	16.5

Protein Annotations

EnsemblPlants:CDY00476	EnsemblPlantsGene:GSBRNA2T00110179001	Gene3D:2.60.40.790	InterPro:A-crystallin/Hsp20_dom	InterPro:HSP20	InterPro:HSP20-like_chaperone
InterPro:IPR002068	InterPro:IPR008978	PANTHER:PTHR11527	PANTHER:PTHR11527:SF238	PFAM:PF00011	PFscan:PS01031
ProteinID:CDY00476	ProteinID:CDY00476.1	SUPFAM:SSF49764	UniParc:UPI0004EE09D6	MapMan:35.1	:

Description

BnaA10g07970D

Coordinates

chrLK031919:+:497337..498201

Molecular Weight (calculated)

18099.0 Da

IEP (calculated)

7.892

GRAVY (calculated)

-0.309

Length

161 amino acids

Sequence
(BLAST)

001: MASTSRLAFR RLLSSTVVVP RPAAAYRLFN TKSGFYDLIT PAMSLSHVIQ SLEDEEKGPL VVATGGRLGW DVKEKENALH VRIDMPGLSR EDVKLSLEQD
101: TLVIKGEEHE EGRKFSSRIE LPQEEYKANE IKAEMKNGVL KVVVPKIIQL HLNNPLHIKV D

Best Arabidopsis Sequence Match ( AT5G51440.1 )
(BLAST)

001: MASSSALALR RLLSSSTVAV PRALRAVRPV AASSRLFNTN AARNYEDGVD RNHHSNRHVS RHGGDFFSHI LDPFTPTRSL SQMLNFMDQV SEIPLVSATR
101: GMGASGVRRG WNVKEKDDAL HLRIDMPGLS REDVKLALEQ NTLVIRGEGE TEEGEDVSGD GRRFTSRIEL PEKVYKTDEI KAEMKNGVLK VVIPKIKEDE
201: RNNIRHINVD

Arabidopsis Description

HSP23.523.5 kDa heat shock protein, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9FGM9]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.