Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 6
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX89437 | Canola | mitochondrion | 99.06 | 99.06 |
| Bra013872.1-P | Field mustard | mitochondrion | 98.59 | 98.59 |
| AT4G25200.1 | Thale cress | mitochondrion | 79.34 | 80.48 |
| CDY38862 | Canola | mitochondrion | 62.91 | 68.37 |
| CDY32630 | Canola | mitochondrion | 51.64 | 64.71 |
| VIT_16s0022g00510.t01 | Wine grape | mitochondrion | 57.75 | 59.13 |
| KRH23958 | Soybean | mitochondrion | 57.75 | 58.02 |
| CDX99920 | Canola | mitochondrion | 41.31 | 55.0 |
| Solyc08g078700.2.1 | Tomato | plastid | 53.52 | 54.29 |
| PGSC0003DMT400012249 | Potato | mitochondrion | 53.52 | 54.03 |
| CDY00476 | Canola | mitochondrion | 37.56 | 49.69 |
| KRH39841 | Soybean | mitochondrion | 32.86 | 47.62 |
| GSMUA_Achr10P... | Banana | mitochondrion | 47.42 | 46.76 |
| TraesCS7D01G178900.1 | Wheat | cytosol | 25.82 | 45.08 |
| TraesCS7B01G083300.1 | Wheat | cytosol | 24.88 | 39.85 |
| OQU85385 | Sorghum | mitochondrion | 40.85 | 39.37 |
| Os02t0758000-01 | Rice | plastid | 39.91 | 38.64 |
| Zm00001d052194_P001 | Maize | mitochondrion | 38.5 | 37.61 |
| TraesCS6B01G346700.1 | Wheat | mitochondrion | 37.56 | 37.21 |
| TraesCS6A01G316200.1 | Wheat | mitochondrion | 37.09 | 36.74 |
| TraesCS6D01G295500.1 | Wheat | mitochondrion | 37.09 | 36.57 |
| TraesCS7A01G232500.1 | Wheat | plastid | 34.74 | 35.92 |
| TraesCS7B01G083100.1 | Wheat | plastid | 35.21 | 35.21 |
| TraesCS7D01G179200.1 | Wheat | cytosol, plastid | 34.27 | 34.93 |
| TraesCS7D01G179400.1 | Wheat | plastid | 34.27 | 34.76 |
| TraesCS7B01G082900.1 | Wheat | plastid | 32.39 | 34.5 |
| TraesCS7A01G236700.1 | Wheat | plastid | 34.27 | 34.43 |
| TraesCS7D01G179300.1 | Wheat | plastid | 34.27 | 34.43 |
| TraesCS7D01G179100.1 | Wheat | plastid | 34.74 | 34.42 |
| TraesCS7B01G083500.1 | Wheat | mitochondrion | 37.56 | 34.33 |
| TraesCS7A01G177500.1 | Wheat | cytosol, plastid | 34.74 | 34.26 |
| TraesCS7A01G177700.1 | Wheat | cytosol, plastid | 34.74 | 34.26 |
| TraesCS7A01G177600.1 | Wheat | plastid | 34.27 | 33.95 |
| TraesCS7B01G083400.1 | Wheat | plastid | 33.8 | 33.8 |
| TraesCS7D01G179000.1 | Wheat | plastid | 33.8 | 33.8 |
| TraesCS7D01G179500.1 | Wheat | plastid | 33.8 | 33.49 |
| HORVU7Hr1G036500.7 | Barley | plastid | 31.92 | 33.33 |
| TraesCS7D01G179600.1 | Wheat | mitochondrion | 36.62 | 33.33 |
| TraesCS7B01G083200.2 | Wheat | plastid | 34.27 | 33.03 |
| TraesCS7D01G232600.1 | Wheat | plastid | 32.39 | 33.01 |
| OQU75930 | Sorghum | plastid | 34.27 | 32.74 |
| OQU75612 | Sorghum | plastid | 34.27 | 32.74 |
| Zm00001d044874_P001 | Maize | cytosol, plastid | 31.92 | 32.69 |
| OQU76071 | Sorghum | plastid | 30.05 | 31.68 |
| TraesCS2B01G531300.1 | Wheat | plastid | 25.82 | 31.25 |
| HORVU7Hr1G036570.2 | Barley | cytosol | 31.92 | 30.77 |
| TraesCS7B01G130900.1 | Wheat | plastid | 22.54 | 29.63 |
| EER89431 | Sorghum | plastid | 29.58 | 29.03 |
| HORVU7Hr1G036470.3 | Barley | cytosol, nucleus | 32.39 | 28.51 |
| EER89430 | Sorghum | plastid | 30.05 | 28.19 |
| HORVU7Hr1G036540.3 | Barley | mitochondrion, nucleus, plastid | 33.8 | 27.91 |
| KXG19616 | Sorghum | plastid | 34.74 | 27.51 |
| TraesCS7A01G177800.1 | Wheat | nucleus | 29.58 | 27.39 |
| HORVU6Hr1G077710.3 | Barley | cytosol | 33.33 | 26.01 |
| Os06t0219500-00 | Rice | mitochondrion | 34.27 | 23.62 |
| TraesCS5B01G123900.1 | Wheat | plastid | 21.6 | 19.25 |
Protein Annotations
| EnsemblPlants:CDY03368 | EnsemblPlantsGene:GSBRNA2T00115996001 | Gene3D:2.60.40.790 | InterPro:A-crystallin/Hsp20_dom | InterPro:HSP20 | InterPro:HSP20-like_chaperone |
| InterPro:IPR002068 | InterPro:IPR008978 | PANTHER:PTHR11527 | PANTHER:PTHR11527:SF238 | PFAM:PF00011 | PFscan:PS01031 |
| ProteinID:CDY03368 | ProteinID:CDY03368.1 | SEG:seg | SUPFAM:SSF49764 | UniParc:UPI0001D62DFC | MapMan:19.1.8.8 |
Description
BnaC01g17140D
Coordinates
chrLK031943:-:436..1400
Molecular Weight (calculated)
23751.1 Da
IEP (calculated)
5.250
GRAVY (calculated)
-0.674
Length
213 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSLALRRL LSSTVAPGSR SFLRPQAASR LLNTNAVRSY DGGENERGVD IDRRSDRSVS RRGDDIFTDV FDPFSPTRSI SQVLNLMDQF MENPLLSASR
101: GMGASGARRG WDIKEKDDAL YLRIDMPGLS REDVKLALEN DTLVIRGEGK DVDDGGEEGG ETGNRRFTSR IGLPEKVYKT DEIKAEMKNG VLKVVVPKMK
201: EEERNDVRQI EIN
101: GMGASGARRG WDIKEKDDAL YLRIDMPGLS REDVKLALEN DTLVIRGEGK DVDDGGEEGG ETGNRRFTSR IGLPEKVYKT DEIKAEMKNG VLKVVVPKMK
201: EEERNDVRQI EIN
001: MASALALKRL LSSSIAPRSR SVLRPAVSSR LFNTNAVRSY DDDGENGDGV DLYRRSVPRR RGDFFSDVFD PFSPTRSVSQ VLNLMDQFME NPLLSATRGM
101: GASGARRGWD IKEKDDALYL RIDMPGLSRE DVKLALEQDT LVIRGEGKNE EDGGEEGESG NRRFTSRIGL PDKIYKIDEI KAEMKNGVLK VVIPKMKEQE
201: RNDVRQIEIN
101: GASGARRGWD IKEKDDALYL RIDMPGLSRE DVKLALEQDT LVIRGEGKNE EDGGEEGESG NRRFTSRIGL PDKIYKIDEI KAEMKNGVLK VVIPKMKEQE
201: RNDVRQIEIN
Arabidopsis Description
HSP23.6HSP23.6-MITO [Source:UniProtKB/TrEMBL;Acc:A0A178USN5]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.