Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 6
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX67612 | Canola | mitochondrion | 98.94 | 98.94 |
| Bra003197.1-P | Field mustard | mitochondrion | 95.24 | 95.74 |
| CDX78266 | Canola | plastid | 86.77 | 71.0 |
| CDX73445 | Canola | plastid | 86.24 | 70.56 |
| AT3G54826.1 | Thale cress | mitochondrion, plastid | 62.96 | 53.36 |
| Os02t0819700-01 | Rice | mitochondrion | 44.97 | 45.21 |
| KRH34848 | Soybean | mitochondrion | 43.39 | 43.62 |
| Zm00001d018501_P001 | Maize | mitochondrion | 42.86 | 43.32 |
| GSMUA_Achr4P04340_001 | Banana | mitochondrion | 42.86 | 43.09 |
| TraesCS6B01G435000.1 | Wheat | mitochondrion | 43.39 | 42.49 |
| KRG91929 | Soybean | mitochondrion | 42.33 | 42.33 |
| VIT_13s0019g04580.t01 | Wine grape | mitochondrion | 41.27 | 40.62 |
| TraesCS6D01G380400.1 | Wheat | mitochondrion | 42.86 | 40.5 |
| Solyc05g053250.2.1 | Tomato | mitochondrion | 40.74 | 37.93 |
| PGSC0003DMT400069831 | Potato | mitochondrion | 39.68 | 36.95 |
| HORVU6Hr1G091500.1 | Barley | mitochondrion | 43.39 | 34.6 |
| EES07768 | Sorghum | mitochondrion | 43.39 | 34.17 |
| TraesCS6A01G395100.1 | Wheat | plastid | 43.39 | 34.02 |
Protein Annotations
| EnsemblPlants:CDY07518 | EnsemblPlantsGene:GSBRNA2T00124558001 | GO:A0A078F7E0 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0008270 |
| GO:GO:0046872 | InterPro:IPR007853 | InterPro:Mt_import_TIM15 | InterPro:Znf_DNL-typ | PANTHER:PTHR20922 | PANTHER:PTHR20922:SF13 |
| PFAM:PF05180 | PFscan:PS51501 | ProteinID:CDY07518 | ProteinID:CDY07518.1 | UniParc:UPI0004EE6EC3 | UniProt:A0A078F7E0 |
| MapMan:35.2 | : | : | : | : | : |
Description
BnaC06g15460DBnaC06g15460D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F7E0]
Coordinates
chrLK031979:-:259836..261218
Molecular Weight (calculated)
20926.0 Da
IEP (calculated)
8.112
GRAVY (calculated)
-0.339
Length
189 amino acids
Sequence
(BLAST)
(BLAST)
001: MAARFLSLRR ALSVYLTNQQ PRVPLFQAGK LAQSKSLLSR DYAYGGLLQR HFSETAATNG CCNSSNSAAE LTKAPSTSPA TAYEELIVKY KSQLKINPRH
101: DFMMVFTCKV CETRSMKMAS RESYEKGVVV VRCEGCDNLH LIADRRGWFG EPGSVEEFLA AQGEEFKKGS MDSLSLTVED LAGEKMSSE
101: DFMMVFTCKV CETRSMKMAS RESYEKGVVV VRCEGCDNLH LIADRRGWFG EPGSVEEFLA AQGEEFKKGS MDSLSLTVED LAGEKMSSE
001: MIKKASFIVL RFQNFTENRS VEFLLSLRLS MAARLLALRR ALSLFSNQQH RFPLSQVSTE QLSLSNSLFS RSHVYGRLFQ RQLSVIREAN EASVTNVCNS
101: SNSATESAKV PSPATPSEEM MVKYKSQLKI NPRHDFMMVF TCKVCDTRSM KMASRESYEN GVVVVRCGGC DNLHLIADRR GWFGEPGSVE DFLASQGEEF
201: KKGSMDSLNL TPEDLAGGKI STE
101: SNSATESAKV PSPATPSEEM MVKYKSQLKI NPRHDFMMVF TCKVCDTRSM KMASRESYEN GVVVVRCGGC DNLHLIADRR GWFGEPGSVE DFLASQGEEF
201: KKGSMDSLNL TPEDLAGGKI STE
Arabidopsis Description
Zim17-type zinc finger protein [Source:UniProtKB/TrEMBL;Acc:F4JE34]
SUBAcon: [mitochondrion,plastid]
SUBAcon: [mitochondrion,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.