CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
mitochondrion 2
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY11476	Canola	plastid	52.57	89.13
AT3G63460.1	Thale cress	cytosol	88.35	88.59
CDX79419	Canola	cytosol	88.35	88.51
CDX76700	Canola	cytosol	87.62	88.34
CDX67919	Canola	cytosol	87.62	87.55
KRH23909	Soybean	cytosol	12.92	79.01
VIT_13s0158g00140.t01	Wine grape	cytosol	64.23	64.7
CDX96696	Canola	cytosol	52.57	62.25
KRH39898	Soybean	nucleus	64.32	62.02
Solyc01g088020.2.1	Tomato	extracellular	62.69	61.74
CDX83811	Canola	cytosol	52.12	61.65
KRH23912	Soybean	cytosol	50.5	61.09
GSMUA_AchrUn_...	Banana	extracellular	12.83	59.92
GSMUA_AchrUn_...	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	10.66	58.71
GSMUA_Achr3P08600_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	55.56	56.47
HORVU6Hr1G025750.1	Barley	cytosol	5.24	54.72
GSMUA_Achr8P22150_001	Banana	cytosol	55.28	54.21
KRH15712	Soybean	mitochondrion, plastid	8.58	53.98
KXG36842	Sorghum	plasma membrane	54.38	53.42
Zm00001d022378_P003	Maize	cytosol	54.38	53.09
Os07t0657200-01	Rice	plastid	53.39	52.44
TraesCS2D01G135000.1	Wheat	cytosol	52.12	50.84
TraesCS2A01G132900.1	Wheat	cytosol	51.94	50.66
TraesCS2B01G156400.3	Wheat	golgi	51.94	50.53
Zm00001d007075_P007	Maize	plasma membrane	53.39	49.29
GSMUA_AchrUn_...	Banana	mitochondrion	35.68	48.95
Zm00001d034411_P001	Maize	nucleus	6.96	44.77
Zm00001d037286_P001	Maize	nucleus	6.96	44.77
Zm00001d011587_P001	Maize	nucleus	7.32	44.02
Zm00001d015774_P001	Maize	mitochondrion	7.32	40.91
Zm00001d051619_P001	Maize	peroxisome	2.53	36.36
Zm00001d019612_P001	Maize	plastid	15.09	35.08

Protein Annotations

Gene3D:1.20.940.10	Gene3D:1.25.40.1030	Gene3D:2.130.10.10	MapMan:22.4.1.2	InterPro:ACE1_Sec16_Sec31	EnsemblPlants:CDX93907
ProteinID:CDX93907	ProteinID:CDX93907.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:GSBRNA2T00156725001
InterPro:IPR001680	InterPro:IPR015943	InterPro:IPR017986	PFAM:PF00400	PFAM:PF12931	ScanProsite:PS00678
PFscan:PS50082	PFscan:PS50294	PANTHER:PTHR13923	PANTHER:PTHR13923:SF11	SMART:SM00320	SUPFAM:SSF50978
UniParc:UPI0004EEFAF7	InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat	InterPro:WD40_repeat_CS	InterPro:WD40_repeat_dom	InterPro:WD40_repeat_dom_sf
SEG:seg	:	:	:	:	:

Description

BnaC04g20660D

Coordinates

chrLK031878:+:603617..609754

Molecular Weight (calculated)

119941.0 Da

IEP (calculated)

4.823

GRAVY (calculated)

-0.316

Length

1107 amino acids

Sequence
(BLAST)

0001: MACIKGVGRS ASVALAPDAP YMAAGTMAGA VDLSFSSSAN LEIFKLDFES DDRELTLVGE ISSSERFNRV AWGRNGSGSE EFSMGLIAGG LVDGNIDLWN
0101: PLSLTGSKSS ENALVGHLSV HKGPVRGLEF NAFTPNLLAS GADDGEICIW DLTKPSEPSH FPLLKGTGSA TQGEISFISW NRKVQQILAS TSYNGTTVIW
0201: DLRKQKPIIN FADSVRRRCS VLQWNPDIAT QIMVASDDDS SPTLKLWDMR NTMSPVREFT GHQKGVIAME WCPSDSSYLL TCAKDNRTIC WDTNTAEIVA
0301: ELPAGNNWNF DVHWYPKIPG VISASSFDGK IGIYNIEGCS RYGAEENTFG TAPLRAPKWY KRPVGASFGF GGKLISFHAK APVKGASGIP SELFLHSLVT
0401: EQSLVSRTSE FDAAIENGDK TSLRGLCEKK SEETESEEEK ETWGLLKIMF EDEETTRTKL ISHLGFSLPS VEKDQAVEGL SSDLNGIGLE DTAAHALEPL
0501: ETNEAAAFAM DNGEDFFNNF PAKPDTPVSS ASAKDFTPPE TDFTGKLEET QEMPEEEEES SDLVFDDAIQ RALVVGDYKE AVDQCISAKK MADALVIAHV
0601: GGTSLWESTR EKYLKTSRAP YMKVVAAMVN NDLTSLIYTR SHKFWKETLA LLCTFAQGEQ WATLCNVLAS KLMDAGNTLA AVLCYICAGN VDRTVEIWSR
0701: SLANERDGRS YAELLQDLME KTLVLALATG NKKFSASLCK LFESYAEILA SQGLLTTAMK YLKVLDSGGL SPELSILRDR ISLSAEPETN TAASGNIQLQ
0801: STIPYNQEPA QAQPNIISNP YDNQYQQPYT DSYVGGYVPP ASHPPMQQAT MFMPHQAQPA PQPSYPPGPA SNAQPSMRTT FVPSTPLALK NADQYQQPTI
0901: ASHSFTGPSN NAYPVPPGPG SYASSGPSQI GQYPNPKMPQ VVGPGAGPIG FTPMSTPGVV PRSVIGSVQP ASPQTQQAAP APAAPPPTVQ TADTSNVPAH
1001: QKPVIATLTR LFNETSEALG GARANPTKKR EIEDNSRKLG ALFVRLNSGD ISKNAADKLA QLCHALDNQD FGAALQIQVL LTTSEWDECN FWLSTLKRMI
1101: KGRQNMR

Best Arabidopsis Sequence Match ( AT3G63460.1 )
(BLAST)

0001: MACIKGVGRS ASVALAPDAP YMAAGTMAGA VDLSFSSSAN LEIFKLDFQS DDRDLPLVGE IPSSERFNRL AWGRNGSGSE EFALGLIAGG LVDGNIDLWN
0101: PLSLIGSQPS ENALVGHLSV HKGPVRGLEF NAISSNLLAS GADDGEICIW DLLKPSEPSH FPLLKGSGSA TQGEISFISW NRKVQQILAS TSYNGTTVIW
0201: DLRKQKPIIN FADSVRRRCS VLQWNPNVTT QIMVASDDDS SPTLKLWDMR NIMSPVREFT GHQRGVIAME WCPSDSSYLL TCAKDNRTIC WDTNTAEIVA
0301: ELPAGNNWNF DVHWYPKIPG VISASSFDGK IGIYNIEGCS RYGVEENNFG TAPLKAPKWY KRPVGASFGF GGKLVSCHAR APAKGTSSIL SEVFLHSLVT
0401: EQSLVSRTSE FEAAIENGDM TSLRGLCEKK SEETESEEEK ETWGLLKIMF EEEGTSRTKL ISHLGFTLPV AEKDQAVDGL SSDLNGIRLE DTAADALDLD
0501: DSNEAAAFAM DNGEDFFNNF PAKPDTPVST SAKDFMPSDT DFSTKGEETQ EMQEEEEESS DPVFDNAIQR ALIVGDYKEA VDQCITANKM ADALVIAHVG
0601: GTALWESTRE KYLKTSSAPY MKVVSAMVNN DLRSLIYTRS HKFWKETLAL LCTFAQGEQW TTLCDALASK LMAAGNTLAA VLCYICAGNV DRTVEIWSRS
0701: LANERDGRSY AELLQDLMEK TLVLALATGN KKFSASLCKL FESYAEILAS QGLLTTAMKY LKVLDSGGLS PELSILRDRI SLSAEPETNT TASGNTQPQS
0801: TMPYNQEPTQ AQPNVLANPY DNQYQQPYTD SYYVPQVSHP PMQQPTMFMP HQAQPAPQPS FTPAPTSNAQ PSMRTTFVPS TPPALKNADQ YQQPTMSSHS
0901: FTGPSNNAYP VPPGPGQYAP SGPSQLGQYP NPKMPQVVAP AAGPIGFTPM ATPGVAPRSV QPASPPTQQA AAQAAPAPAT PPPTVQTADT SNVPAHQKPV
1001: IATLTRLFNE TSEALGGARA NTTKKREIED NSRKLGALFV KLNSGDISKN AADKLAQLCQ ALDNNDFSTA LQIQVLLTTS EWDECNFWLA TLKRMMVKAR
1101: QNVR

Arabidopsis Description

SEC31BProtein transport protein SEC31 homolog B [Source:UniProtKB/Swiss-Prot;Acc:Q8L611]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.