Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 2
- cytosol 2
- extracellular 1
- golgi 1
- plasma membrane 1
- endoplasmic reticulum 1
- vacuole 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_AchrUn_... | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole | 13.64 | 76.62 |
| GSMUA_Achr3P08600_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole | 72.63 | 75.3 |
| KRH23909 | Soybean | cytosol | 10.98 | 68.51 |
| GSMUA_AchrUn_... | Banana | mitochondrion | 47.92 | 67.04 |
| GSMUA_AchrUn_... | Banana | extracellular | 13.73 | 65.4 |
| HORVU7Hr1G058340.1 | Barley | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 5.76 | 61.32 |
| VIT_13s0158g00140.t01 | Wine grape | cytosol | 58.55 | 60.15 |
| CDY11476 | Canola | plastid | 34.63 | 59.88 |
| Solyc01g088020.2.1 | Tomato | extracellular | 58.37 | 58.63 |
| Os07t0657200-01 | Rice | plastid | 58.37 | 58.47 |
| Zm00001d022378_P003 | Maize | cytosol | 58.55 | 58.29 |
| KXG36842 | Sorghum | plasma membrane | 57.84 | 57.94 |
| KRH39898 | Soybean | nucleus | 58.02 | 57.06 |
| AT3G63460.1 | Thale cress | cytosol | 55.45 | 56.7 |
| CDX76700 | Canola | cytosol | 55.09 | 56.65 |
| Bra007745.1-P | Field mustard | cytosol | 55.09 | 56.6 |
| Bra007747.1-P | Field mustard | cytosol | 55.09 | 56.6 |
| KRH23912 | Soybean | cytosol | 45.79 | 56.5 |
| KRH15712 | Soybean | mitochondrion, plastid | 8.77 | 56.25 |
| CDX79419 | Canola | cytosol | 54.65 | 55.84 |
| TraesCS2D01G135000.1 | Wheat | cytosol | 55.98 | 55.68 |
| Bra003525.1-P | Field mustard | cytosol | 54.47 | 55.61 |
| CDX67919 | Canola | cytosol | 54.56 | 55.6 |
| TraesCS2A01G132900.1 | Wheat | cytosol | 55.89 | 55.59 |
| CDX93907 | Canola | cytosol | 54.21 | 55.28 |
| TraesCS2B01G156400.3 | Wheat | golgi | 55.54 | 55.1 |
| Zm00001d007075_P007 | Maize | plasma membrane | 57.93 | 54.55 |
| HORVU2Hr1G023350.3 | Barley | cytosol, plastid | 52.44 | 54.41 |
| Zm00001d011587_P001 | Maize | nucleus | 8.86 | 54.35 |
| Zm00001d034411_P001 | Maize | nucleus | 8.24 | 54.07 |
| AT1G18830.1 | Thale cress | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 46.06 | 53.66 |
| Bra016539.1-P | Field mustard | cytosol | 43.22 | 53.51 |
| Zm00001d037286_P001 | Maize | nucleus | 8.15 | 53.49 |
| CDX96696 | Canola | cytosol | 43.49 | 52.51 |
| CDX83811 | Canola | cytosol | 42.87 | 51.71 |
| Zm00001d051619_P001 | Maize | peroxisome | 3.19 | 46.75 |
| Zm00001d015774_P001 | Maize | mitochondrion | 7.71 | 43.94 |
| HORVU7Hr1G058330.1 | Barley | cytosol, plastid | 3.01 | 40.0 |
| Zm00001d019612_P001 | Maize | plastid | 16.03 | 38.03 |
Protein Annotations
| Gene3D:1.20.940.10 | Gene3D:1.25.40.1030 | Gene3D:2.130.10.10 | MapMan:22.4.1.2 | InterPro:ACE1_Sec16_Sec31 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | EnsemblPlantsGene:GSMUA_Achr8G22150_001 | EnsemblPlants:GSMUA_Achr8P22150_001 | EnsemblPlants:GSMUA_Achr8T22150_001 | InterPro:IPR001680 |
| InterPro:IPR015943 | InterPro:IPR017986 | UniProt:M0TSL8 | PFAM:PF12931 | PFscan:PS50082 | PFscan:PS50294 |
| PANTHER:PTHR13923 | PANTHER:PTHR13923:SF11 | SMART:SM00320 | SUPFAM:SSF50978 | UniParc:UPI000294CCFE | InterPro:WD40/YVTN_repeat-like_dom_sf |
| InterPro:WD40_repeat | InterPro:WD40_repeat_dom | InterPro:WD40_repeat_dom_sf | SEG:seg | : | : |
Description
Putative Protein transport protein Sec31A [Source:GMGC_GENE;Acc:GSMUA_Achr8G22150_001]
Coordinates
chr8:-:26818361..26836352
Molecular Weight (calculated)
123261.0 Da
IEP (calculated)
5.363
GRAVY (calculated)
-0.264
Length
1129 amino acids
Sequence
(BLAST)
(BLAST)
0001: MACIKSAPRS ALVAFAPDAP YLAAGTMAGA VDLSFSSTAN LEIFKLDFQS DAHDLPVAGA CPSDERFNRL SWGKPPGSSS EEFSLGLVAG GLSDGSIGIW
0101: NPLKIISSED LNDSSVAKLA KHVGPVRGLE FSTLSPNLLA SGADGGELCI WDLAKPSEPK FFPSLRSVGS GAQTEVSFVS WNPKVQYILS STSYNGITAE
0201: TPHKASFYFV DSNRRRCSVL QWNPDVSTEL IVASDDDSSP SLRVWDVRQS LLPAREFVGH TKGVIAMSWC PCDSSFLLTC AKDNRTICWD TTTGEMVCEL
0301: PASTNWNFDI HWYPKIPGVI SASSFDVKVG IYNIEVCSKH AAVEGEFGTP VRLRAPKWLR CPVGVSFGFG GKLISFQPCQ STPEDRLPAS EVFMHNLVTE
0401: HSLVSRSTEF EAAIQNGEKS SLCALCEQKS HDSISKDDRE TWGFLKIMFE EEGTARTKLL SYLGFTVPEE CSDIYSDLDN LGKGLENTLS LDTRSSVEVD
0501: GSTYSIDNGE EFFNNPQISK DSSAYEEKSV PNVEKAQKEP EEPSRSYDLS FDDSIQHALV VGDYKGAVLR CITADRMADA LVIAHAGGSS LWESTRDQYL
0601: KNSLAPYLKV VSALVRNDLM ALINTRPLKS WKETLALLCT FAQKEEWTVL CDSLASRLMA VGNMLAATLC YICAGNMDRT VEIWSHSLKL DSRGKTYIDL
0701: LQDLMEKTIV LALATEHKQF SASLSKLVEN YAELLANQGL LTTAMKYLKL LGSEESSNEL AILRERISIS AEERDVPKSL PYRSGASHTE SLYGADQSGY
0801: GVDYSQNYYE DKNLSQPLLQ LHQNVADTSR AEGFHQVPGS AYGGNQLVQQ KPQVPDFSNQ RLFHPSQPSQ NFILSHTSQI SQQAFTSPAT MAQPTMKPFS
0901: PATPAALRNV ERYQQPSLGS QLYPGAANPL YQHGPPIPSP QDGGASQPAF VTGQRFAQPI STTTAPRGFM PVYNPNFAQR PSISPVHPLS PTKSSEARPV
1001: GVPPTTPPTV QTVDTSNVPA EWKLVIATLT RLYNETSAAL GGSNANPSKK REIEDNSRKI GALFAKLNSG DISPNAAAKL VQLCQALDAG DFAGALRIQV
1101: VLTTSDWDEC NFWLAALKRM IKTRQTVRL
0101: NPLKIISSED LNDSSVAKLA KHVGPVRGLE FSTLSPNLLA SGADGGELCI WDLAKPSEPK FFPSLRSVGS GAQTEVSFVS WNPKVQYILS STSYNGITAE
0201: TPHKASFYFV DSNRRRCSVL QWNPDVSTEL IVASDDDSSP SLRVWDVRQS LLPAREFVGH TKGVIAMSWC PCDSSFLLTC AKDNRTICWD TTTGEMVCEL
0301: PASTNWNFDI HWYPKIPGVI SASSFDVKVG IYNIEVCSKH AAVEGEFGTP VRLRAPKWLR CPVGVSFGFG GKLISFQPCQ STPEDRLPAS EVFMHNLVTE
0401: HSLVSRSTEF EAAIQNGEKS SLCALCEQKS HDSISKDDRE TWGFLKIMFE EEGTARTKLL SYLGFTVPEE CSDIYSDLDN LGKGLENTLS LDTRSSVEVD
0501: GSTYSIDNGE EFFNNPQISK DSSAYEEKSV PNVEKAQKEP EEPSRSYDLS FDDSIQHALV VGDYKGAVLR CITADRMADA LVIAHAGGSS LWESTRDQYL
0601: KNSLAPYLKV VSALVRNDLM ALINTRPLKS WKETLALLCT FAQKEEWTVL CDSLASRLMA VGNMLAATLC YICAGNMDRT VEIWSHSLKL DSRGKTYIDL
0701: LQDLMEKTIV LALATEHKQF SASLSKLVEN YAELLANQGL LTTAMKYLKL LGSEESSNEL AILRERISIS AEERDVPKSL PYRSGASHTE SLYGADQSGY
0801: GVDYSQNYYE DKNLSQPLLQ LHQNVADTSR AEGFHQVPGS AYGGNQLVQQ KPQVPDFSNQ RLFHPSQPSQ NFILSHTSQI SQQAFTSPAT MAQPTMKPFS
0901: PATPAALRNV ERYQQPSLGS QLYPGAANPL YQHGPPIPSP QDGGASQPAF VTGQRFAQPI STTTAPRGFM PVYNPNFAQR PSISPVHPLS PTKSSEARPV
1001: GVPPTTPPTV QTVDTSNVPA EWKLVIATLT RLYNETSAAL GGSNANPSKK REIEDNSRKI GALFAKLNSG DISPNAAAKL VQLCQALDAG DFAGALRIQV
1101: VLTTSDWDEC NFWLAALKRM IKTRQTVRL
0001: MACIKGVGRS ASVALAPDAP YMAAGTMAGA VDLSFSSSAN LEIFKLDFQS DDRDLPLVGE IPSSERFNRL AWGRNGSGSE EFALGLIAGG LVDGNIDLWN
0101: PLSLIGSQPS ENALVGHLSV HKGPVRGLEF NAISSNLLAS GADDGEICIW DLLKPSEPSH FPLLKGSGSA TQGEISFISW NRKVQQILAS TSYNGTTVIW
0201: DLRKQKPIIN FADSVRRRCS VLQWNPNVTT QIMVASDDDS SPTLKLWDMR NIMSPVREFT GHQRGVIAME WCPSDSSYLL TCAKDNRTIC WDTNTAEIVA
0301: ELPAGNNWNF DVHWYPKIPG VISASSFDGK IGIYNIEGCS RYGVEENNFG TAPLKAPKWY KRPVGASFGF GGKLVSCHAR APAKGTSSIL SEVFLHSLVT
0401: EQSLVSRTSE FEAAIENGDM TSLRGLCEKK SEETESEEEK ETWGLLKIMF EEEGTSRTKL ISHLGFTLPV AEKDQAVDGL SSDLNGIRLE DTAADALDLD
0501: DSNEAAAFAM DNGEDFFNNF PAKPDTPVST SAKDFMPSDT DFSTKGEETQ EMQEEEEESS DPVFDNAIQR ALIVGDYKEA VDQCITANKM ADALVIAHVG
0601: GTALWESTRE KYLKTSSAPY MKVVSAMVNN DLRSLIYTRS HKFWKETLAL LCTFAQGEQW TTLCDALASK LMAAGNTLAA VLCYICAGNV DRTVEIWSRS
0701: LANERDGRSY AELLQDLMEK TLVLALATGN KKFSASLCKL FESYAEILAS QGLLTTAMKY LKVLDSGGLS PELSILRDRI SLSAEPETNT TASGNTQPQS
0801: TMPYNQEPTQ AQPNVLANPY DNQYQQPYTD SYYVPQVSHP PMQQPTMFMP HQAQPAPQPS FTPAPTSNAQ PSMRTTFVPS TPPALKNADQ YQQPTMSSHS
0901: FTGPSNNAYP VPPGPGQYAP SGPSQLGQYP NPKMPQVVAP AAGPIGFTPM ATPGVAPRSV QPASPPTQQA AAQAAPAPAT PPPTVQTADT SNVPAHQKPV
1001: IATLTRLFNE TSEALGGARA NTTKKREIED NSRKLGALFV KLNSGDISKN AADKLAQLCQ ALDNNDFSTA LQIQVLLTTS EWDECNFWLA TLKRMMVKAR
1101: QNVR
0101: PLSLIGSQPS ENALVGHLSV HKGPVRGLEF NAISSNLLAS GADDGEICIW DLLKPSEPSH FPLLKGSGSA TQGEISFISW NRKVQQILAS TSYNGTTVIW
0201: DLRKQKPIIN FADSVRRRCS VLQWNPNVTT QIMVASDDDS SPTLKLWDMR NIMSPVREFT GHQRGVIAME WCPSDSSYLL TCAKDNRTIC WDTNTAEIVA
0301: ELPAGNNWNF DVHWYPKIPG VISASSFDGK IGIYNIEGCS RYGVEENNFG TAPLKAPKWY KRPVGASFGF GGKLVSCHAR APAKGTSSIL SEVFLHSLVT
0401: EQSLVSRTSE FEAAIENGDM TSLRGLCEKK SEETESEEEK ETWGLLKIMF EEEGTSRTKL ISHLGFTLPV AEKDQAVDGL SSDLNGIRLE DTAADALDLD
0501: DSNEAAAFAM DNGEDFFNNF PAKPDTPVST SAKDFMPSDT DFSTKGEETQ EMQEEEEESS DPVFDNAIQR ALIVGDYKEA VDQCITANKM ADALVIAHVG
0601: GTALWESTRE KYLKTSSAPY MKVVSAMVNN DLRSLIYTRS HKFWKETLAL LCTFAQGEQW TTLCDALASK LMAAGNTLAA VLCYICAGNV DRTVEIWSRS
0701: LANERDGRSY AELLQDLMEK TLVLALATGN KKFSASLCKL FESYAEILAS QGLLTTAMKY LKVLDSGGLS PELSILRDRI SLSAEPETNT TASGNTQPQS
0801: TMPYNQEPTQ AQPNVLANPY DNQYQQPYTD SYYVPQVSHP PMQQPTMFMP HQAQPAPQPS FTPAPTSNAQ PSMRTTFVPS TPPALKNADQ YQQPTMSSHS
0901: FTGPSNNAYP VPPGPGQYAP SGPSQLGQYP NPKMPQVVAP AAGPIGFTPM ATPGVAPRSV QPASPPTQQA AAQAAPAPAT PPPTVQTADT SNVPAHQKPV
1001: IATLTRLFNE TSEALGGARA NTTKKREIED NSRKLGALFV KLNSGDISKN AADKLAQLCQ ALDNNDFSTA LQIQVLLTTS EWDECNFWLA TLKRMMVKAR
1101: QNVR
Arabidopsis Description
SEC31BProtein transport protein SEC31 homolog B [Source:UniProtKB/Swiss-Prot;Acc:Q8L611]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.