Factsheet for TraesCS2D01G135000.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 2
cytosol 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid, secretory
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G132900.1	Wheat	cytosol	98.59	98.59
TraesCS2B01G156400.3	Wheat	golgi	95.42	95.17
HORVU2Hr1G023350.3	Barley	cytosol, plastid	87.93	91.73
Os07t0657200-01	Rice	plastid	79.47	80.04
KXG36842	Sorghum	plasma membrane	78.06	78.62
Zm00001d022378_P003	Maize	cytosol	77.0	77.07
Zm00001d007075_P007	Maize	plasma membrane	75.24	71.23
GSMUA_AchrUn_...	Banana	extracellular	12.86	61.6
KRH23909	Soybean	cytosol	9.52	59.67
GSMUA_Achr3P08600_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	56.74	59.14
VIT_13s0158g00140.t01	Wine grape	cytosol	54.89	56.69
KRH15712	Soybean	mitochondrion, plastid	8.72	56.25
GSMUA_Achr8P22150_001	Banana	cytosol	55.68	55.98
GSMUA_AchrUn_...	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	9.87	55.72
CDY11476	Canola	plastid	31.72	55.13
KRH23912	Soybean	cytosol	44.14	54.75
Solyc01g088020.2.1	Tomato	extracellular	53.74	54.27
KRH39898	Soybean	nucleus	54.8	54.18
CDX79419	Canola	cytosol	51.81	53.21
Bra003525.1-P	Field mustard	cytosol	51.37	52.71
CDX67919	Canola	cytosol	51.45	52.71
Bra007745.1-P	Field mustard	cytosol	51.01	52.68
Bra007747.1-P	Field mustard	cytosol	51.01	52.68
AT3G63460.1	Thale cress	cytosol	51.19	52.63
GSMUA_AchrUn_...	Banana	mitochondrion	37.36	52.54
CDX93907	Canola	cytosol	50.84	52.12
CDX76700	Canola	cytosol	50.31	52.0
Bra016539.1-P	Field mustard	cytosol	41.5	51.64
CDX96696	Canola	cytosol	42.03	51.02
CDX83811	Canola	cytosol	41.85	50.75
AT1G18830.1	Thale cress	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	42.03	49.23

Protein Annotations

Gene3D:1.20.940.10	Gene3D:1.25.40.1030	Gene3D:2.130.10.10	MapMan:22.4.1.2	InterPro:ACE1_Sec16_Sec31	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:IPR001680	InterPro:IPR015943	InterPro:IPR017986	PFAM:PF12931
ScanProsite:PS00678	PFscan:PS50082	PFscan:PS50294	PANTHER:PTHR13923	SMART:SM00320	SUPFAM:SSF50978
EnsemblPlantsGene:TraesCS2D01G135000	EnsemblPlants:TraesCS2D01G135000.1	InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat	InterPro:WD40_repeat_CS	InterPro:WD40_repeat_dom
InterPro:WD40_repeat_dom_sf	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr2D:-:79418149..79426830

Molecular Weight (calculated)

122814.0 Da

IEP (calculated)

4.765

GRAVY (calculated)

-0.333

Length

1135 amino acids

Sequence
(BLAST)

0001: MACIKSAQRA ALTALAPEAP YLAAGTMSGA VDMQFSASAN IEIFSLDFQS DSPDLPLLAA APSPDRFNRL CWSRPGAADG DSFSLGLLAG GLSDGSVAVW
0101: NPLSMISSEG QAEDVMVAQL EKHNGAVTGL EFSELTPNRL ASGGNEGDIC IWDLKNPCEP NVFPPLKNVG SNAQAEISCL TWNPKFQHIL ASASSNGITV
0201: VWDLRTQKPL TSFSDSNRRN CSVLQWNPDM STQLILASDD DNSPSLRVWD VRKTIAPVRE FVGHSKGVIG MSWCPYDSSF LLTCAKDNRT ICWDTVSGEI
0301: ISELPTSSNG NFDIHWYRKI PGVVAASSYD GKIGVHNLEF SSLYAAGDST VGASARPRAA APKWLKCPTG ASFGFGGKLV SFHPAQGTQA GTSEVHVHNL
0401: VIEQSLVSRS TEFEAAMQNR DKSALRALCE QKSQESLSEE EKETWSFLRV MFEDGDTART KLLVHLGFNP PQEPTVNATD ELSKSLADTL NLDHGTDNMD
0501: AQFLADNGDD FFNNPQPSET SLAEEPISTN VQEIEQEMPE NIVLSDPSID KSIQHALVVG DYKGAVNQCL AANRMADALV IAHAGGSALW ESTRNQYLKN
0601: SVSPYLKVVS AMVGNDLMSF VSTWPLNAWK ETLALLCTFA GKEEWNVLCD TLASRLLSAG DMLAATLCYI CAGNIDKAVE IWSRNLSSED GGKTYVDLLQ
0701: DLMEKTITLA LATGHKRFSA SLSKLVENYA ELLASQGLLK TAMEYLKLMG ADENSEDLSI LRDRIAFSTE ENDATRSSVP ESSANSSSYL PNQRSYTPDP
0801: SQNLYQGPQQ YNNVQSYPEV YPQPPNSRAN VPSNAYPEVY PQSHNAAYSG YAGYQPQHQT QMFVPQNTPV DTQPSPAPLP VPHQTVKTFT PANVPSLKNP
0901: EQYHQASTLG SQLYTPPANS SYAPGPPAQF HSGPPTTFHQ PAPPAQYQTV PPIPSVPGTN PNQMFTPAVP TNSASRFIPS TNQGFVQRPG LSPAQPSSPT
1001: QAQPPAQPTV APPAPPPTVQ TADTSNVSAD LRPVIATLTR LFDETSKALG GAPAKKREIE DNSKKIGALF AKLNTGDISP NVSSKLIQMC SALDSSDFAT
1101: AMQLQILLTT SDWDECNFWL SSLKRMIKTR QSFRV

Best Arabidopsis Sequence Match ( AT3G63460.1 )
(BLAST)

0001: MACIKGVGRS ASVALAPDAP YMAAGTMAGA VDLSFSSSAN LEIFKLDFQS DDRDLPLVGE IPSSERFNRL AWGRNGSGSE EFALGLIAGG LVDGNIDLWN
0101: PLSLIGSQPS ENALVGHLSV HKGPVRGLEF NAISSNLLAS GADDGEICIW DLLKPSEPSH FPLLKGSGSA TQGEISFISW NRKVQQILAS TSYNGTTVIW
0201: DLRKQKPIIN FADSVRRRCS VLQWNPNVTT QIMVASDDDS SPTLKLWDMR NIMSPVREFT GHQRGVIAME WCPSDSSYLL TCAKDNRTIC WDTNTAEIVA
0301: ELPAGNNWNF DVHWYPKIPG VISASSFDGK IGIYNIEGCS RYGVEENNFG TAPLKAPKWY KRPVGASFGF GGKLVSCHAR APAKGTSSIL SEVFLHSLVT
0401: EQSLVSRTSE FEAAIENGDM TSLRGLCEKK SEETESEEEK ETWGLLKIMF EEEGTSRTKL ISHLGFTLPV AEKDQAVDGL SSDLNGIRLE DTAADALDLD
0501: DSNEAAAFAM DNGEDFFNNF PAKPDTPVST SAKDFMPSDT DFSTKGEETQ EMQEEEEESS DPVFDNAIQR ALIVGDYKEA VDQCITANKM ADALVIAHVG
0601: GTALWESTRE KYLKTSSAPY MKVVSAMVNN DLRSLIYTRS HKFWKETLAL LCTFAQGEQW TTLCDALASK LMAAGNTLAA VLCYICAGNV DRTVEIWSRS
0701: LANERDGRSY AELLQDLMEK TLVLALATGN KKFSASLCKL FESYAEILAS QGLLTTAMKY LKVLDSGGLS PELSILRDRI SLSAEPETNT TASGNTQPQS
0801: TMPYNQEPTQ AQPNVLANPY DNQYQQPYTD SYYVPQVSHP PMQQPTMFMP HQAQPAPQPS FTPAPTSNAQ PSMRTTFVPS TPPALKNADQ YQQPTMSSHS
0901: FTGPSNNAYP VPPGPGQYAP SGPSQLGQYP NPKMPQVVAP AAGPIGFTPM ATPGVAPRSV QPASPPTQQA AAQAAPAPAT PPPTVQTADT SNVPAHQKPV
1001: IATLTRLFNE TSEALGGARA NTTKKREIED NSRKLGALFV KLNSGDISKN AADKLAQLCQ ALDNNDFSTA LQIQVLLTTS EWDECNFWLA TLKRMMVKAR
1101: QNVR

Arabidopsis Description

SEC31BProtein transport protein SEC31 homolog B [Source:UniProtKB/Swiss-Prot;Acc:Q8L611]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.