Factsheet for Os07t0657200-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
mitochondrion 2
cytosol 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	cytosol

nucleus: 15276429
plastid: 21433289
plastid: 27992503
plasma membrane: 28056797

msms PMID: 15276429 doi

MM Khan, S Komatsu

Department of Molecular Genetics, National Institute of Agrobiological Sciences, Kannondai 2-1-2, Tsukuba 305-8602, Japan.

msms PMID: 28056797 doi

N Yang, T Wang

Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China., Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China. twang@ibcas.ac.cn.

msms PMID: 27992503 doi

S Xing, X Meng, L Zhou, H Mujahid, C Zhao, Y Zhang, C Wang, Z Peng

Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.

msms PMID: 21433289 doi

S Reiland, J Grossmann, K Baerenfaller, P Gehrig, A Nunes-Nesi, AR Fernie, W Gruissem, S Baginsky

Department of Biology, Plant Biotechnology, ETH Zurich, Zurich, Switzerland.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU7Hr1G058340.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	8.52	90.57
KXG36842	Sorghum	plasma membrane	81.9	81.9
Zm00001d022378_P003	Maize	cytosol	80.75	80.25
TraesCS2A01G132900.1	Wheat	cytosol	80.12	79.56
TraesCS2D01G135000.1	Wheat	cytosol	80.04	79.47
TraesCS2B01G156400.3	Wheat	golgi	79.15	78.38
HORVU2Hr1G023350.3	Barley	cytosol, plastid	73.38	76.01
Zm00001d007075_P007	Maize	plasma membrane	80.21	75.4
KRH23909	Soybean	cytosol	10.12	62.98
GSMUA_AchrUn_...	Banana	extracellular	13.13	62.45
GSMUA_Achr3P08600_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	59.09	61.16
VIT_13s0158g00140.t01	Wine grape	cytosol	57.05	58.51
GSMUA_Achr8P22150_001	Banana	cytosol	58.47	58.37
GSMUA_AchrUn_...	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	10.2	57.21
KRH23912	Soybean	cytosol	45.61	56.17
CDY11476	Canola	plastid	32.48	56.05
Solyc01g088020.2.1	Tomato	extracellular	55.37	55.52
KRH39898	Soybean	nucleus	56.52	55.49
KRH15712	Soybean	mitochondrion, plastid	8.61	55.11
CDX79419	Canola	cytosol	53.59	54.66
Bra003525.1-P	Field mustard	cytosol	53.42	54.43
CDX67919	Canola	cytosol	53.5	54.42
AT3G63460.1	Thale cress	cytosol	52.88	53.99
GSMUA_AchrUn_...	Banana	mitochondrion	38.6	53.9
Bra007747.1-P	Field mustard	cytosol	52.53	53.87
Bra007745.1-P	Field mustard	cytosol	52.44	53.78
CDX76700	Canola	cytosol	52.35	53.73
CDX93907	Canola	cytosol	52.44	53.39
Bra016539.1-P	Field mustard	cytosol	41.79	51.64
CDX96696	Canola	cytosol	42.41	51.12
CDX83811	Canola	cytosol	42.15	50.75
AT1G18830.1	Thale cress	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	43.12	50.15
HORVU7Hr1G058330.1	Barley	cytosol, plastid	3.73	49.41

Protein Annotations

Gene3D:1.20.940.10	Gene3D:1.25.40.1030	Gene3D:2.130.10.10	MapMan:22.4.1.2	EntrezGene:4344154	InterPro:ACE1_Sec16_Sec31
ProteinID:BAF22424.1	ProteinID:BAT03012.1	ProteinID:BAT03014.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR001680	InterPro:IPR015943	InterPro:IPR017986	EnsemblPlantsGene:Os07g0657200	EnsemblPlants:Os07t0657200-01	PFAM:PF07304
PFAM:PF12931	ScanProsite:PS00678	PFscan:PS50082	PFscan:PS50294	PANTHER:PTHR13923	PANTHER:PTHR13923:SF11
UniProt:Q0D3Z9	SMART:SM00320	InterPro:SRA1-protein/COPII_Sec31	SUPFAM:SSF50978	UniParc:UPI000043DF00	InterPro:WD40/YVTN_repeat-like_dom_sf
InterPro:WD40_repeat	InterPro:WD40_repeat_CS	InterPro:WD40_repeat_dom	InterPro:WD40_repeat_dom_sf	RefSeq:XP_015646666.1	SEG:seg

Description

OsWD40-148WD40/YVTN repeat-like domain containing protein. (Os07t0657200-01);WD40/YVTN repeat-like domain containing protein. (Os07t0657200-02);Similar to Sec31p. (Os07t0657200-03);Similar to Sec31p. (Os07t0657200-04)

Coordinates

chr7:+:27656036..27665836

Molecular Weight (calculated)

121753.0 Da

IEP (calculated)

4.989

GRAVY (calculated)

-0.299

Length

1127 amino acids

Sequence
(BLAST)

0001: MACIKSAQRA ALTALAPEAP YLAAGTMSGA VDMLFSASAN IEIFRLDFQS DSPDLPLLAS APSPDRFNRL SWSRPGAADG DSFSLGLLAG GLSDGSVAVW
0101: NPLSMINSEG KAEDALVARL EKHTGPVCGL EFSELTPNRL ASGAEQGELC IWDLKNPSEP VVFPPLKSVG SSAQAEISYL TWNPKFQHIL ATASSNGMTV
0201: VWDLRNQKPL TSFSDSNRTK CSVLQWNPDM STQLIVASDD DNSPSLRVWD VRKTISPVRE FVGHSKGVIA MSWCPYDSSY LLTCSKDNRT ICWDTVSGEI
0301: MSELPASSNG NFDIHWYRKI PGVVAASSFD VKIGIYNLEF SGLYAAGDSA IGAPARPRAP APKWLKCPTG ASFGFGGKLV SFHQAAPTQG AQVTTSEVHV
0401: HNLVIEQSLV SRSTEFEAAI QNGDKSSLRA LCDKKAQESL SDEERETWGF LRVMFEDGDA ARTKLLAHLG FNPPQEQTSS STDELNRTLA DTLNLDHGAP
0501: TDTSDSQFMV DNGEDFFNNP QPSEASLAEE SISTNGQQIE QEMPVNVEPS DLSVDKSIQH ALVVGDYKGA VNLCLAANRM ADALVIAHAG GSALWESTRN
0601: QYLKNTVSPY LKVVSAMVGN DLMSFVSTWP LNAWKETLAL LCTFARKEEW NVLCDTLASR LLGVGDTLAA TLCYICAGNI DKAVEIWSRD LKSEDGGKTY
0701: VDLLQDLMEK TITLALATGH KSFSASLSKL VENYAELLAS QGLLKTAMEY LKLLGSDEHS HELAILRDRI AFSTEENHAA STSVHAGSIN SSAYPTIQPS
0801: YSTPDPSQNL YQGTSQYAVP SNQYQDYQQQ SNTAYGTYNS TYSQQPTQMF VPSNTTPVIS QPNATPAPVP QQPVKAFTPT NLPGLKNPEQ YQQPTLGSQL
0901: YAGANPPYTS GQSTPYQGVP PTTYHQPRPP TQFQTVPTAP PAVSSATVPG TTPSQMFPGP VANNPTSRFM PSNNPGFVQR PGLSPVQPSS PTQAQGQPQP
1001: VVAPPAPPAT VQTADTSKVS AELKPVIATL TRLFDETSKA MGGSQVKKRE IEDNSRKIGT LFAKLNSGDI SPNVSSKLIQ LCSALDSGDF ATAMHLQVLL
1101: TTSDWDECNF WLAALKRMIK TRQNFRM

Best Arabidopsis Sequence Match ( AT3G63460.1 )
(BLAST)

0001: MACIKGVGRS ASVALAPDAP YMAAGTMAGA VDLSFSSSAN LEIFKLDFQS DDRDLPLVGE IPSSERFNRL AWGRNGSGSE EFALGLIAGG LVDGNIDLWN
0101: PLSLIGSQPS ENALVGHLSV HKGPVRGLEF NAISSNLLAS GADDGEICIW DLLKPSEPSH FPLLKGSGSA TQGEISFISW NRKVQQILAS TSYNGTTVIW
0201: DLRKQKPIIN FADSVRRRCS VLQWNPNVTT QIMVASDDDS SPTLKLWDMR NIMSPVREFT GHQRGVIAME WCPSDSSYLL TCAKDNRTIC WDTNTAEIVA
0301: ELPAGNNWNF DVHWYPKIPG VISASSFDGK IGIYNIEGCS RYGVEENNFG TAPLKAPKWY KRPVGASFGF GGKLVSCHAR APAKGTSSIL SEVFLHSLVT
0401: EQSLVSRTSE FEAAIENGDM TSLRGLCEKK SEETESEEEK ETWGLLKIMF EEEGTSRTKL ISHLGFTLPV AEKDQAVDGL SSDLNGIRLE DTAADALDLD
0501: DSNEAAAFAM DNGEDFFNNF PAKPDTPVST SAKDFMPSDT DFSTKGEETQ EMQEEEEESS DPVFDNAIQR ALIVGDYKEA VDQCITANKM ADALVIAHVG
0601: GTALWESTRE KYLKTSSAPY MKVVSAMVNN DLRSLIYTRS HKFWKETLAL LCTFAQGEQW TTLCDALASK LMAAGNTLAA VLCYICAGNV DRTVEIWSRS
0701: LANERDGRSY AELLQDLMEK TLVLALATGN KKFSASLCKL FESYAEILAS QGLLTTAMKY LKVLDSGGLS PELSILRDRI SLSAEPETNT TASGNTQPQS
0801: TMPYNQEPTQ AQPNVLANPY DNQYQQPYTD SYYVPQVSHP PMQQPTMFMP HQAQPAPQPS FTPAPTSNAQ PSMRTTFVPS TPPALKNADQ YQQPTMSSHS
0901: FTGPSNNAYP VPPGPGQYAP SGPSQLGQYP NPKMPQVVAP AAGPIGFTPM ATPGVAPRSV QPASPPTQQA AAQAAPAPAT PPPTVQTADT SNVPAHQKPV
1001: IATLTRLFNE TSEALGGARA NTTKKREIED NSRKLGALFV KLNSGDISKN AADKLAQLCQ ALDNNDFSTA LQIQVLLTTS EWDECNFWLA TLKRMMVKAR
1101: QNVR

Arabidopsis Description

SEC31BProtein transport protein SEC31 homolog B [Source:UniProtKB/Swiss-Prot;Acc:Q8L611]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.