Factsheet for Bra007747.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
mitochondrion 2
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra007745.1-P	Field mustard	cytosol	98.36	98.36
CDY11476	Canola	plastid	57.78	97.24
AT3G63460.1	Thale cress	cytosol	87.17	86.78
Bra003525.1-P	Field mustard	cytosol	86.44	85.9
KRH23909	Soybean	cytosol	13.38	81.22
VIT_13s0158g00140.t01	Wine grape	cytosol	63.88	63.88
Bra016539.1-P	Field mustard	cytosol	52.59	63.38
KRH39898	Soybean	nucleus	65.24	62.46
Solyc01g088020.2.1	Tomato	extracellular	62.97	61.57
KRH23912	Soybean	cytosol	50.5	60.66
GSMUA_AchrUn_...	Banana	extracellular	12.83	59.49
GSMUA_AchrUn_...	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	10.74	58.71
HORVU6Hr1G025750.1	Barley	cytosol	5.55	57.55
GSMUA_Achr3P08600_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	56.51	57.02
GSMUA_Achr8P22150_001	Banana	cytosol	56.6	55.09
KRH15712	Soybean	mitochondrion, plastid	8.55	53.41
KXG36842	Sorghum	plasma membrane	54.69	53.33
Zm00001d022378_P003	Maize	cytosol	54.87	53.17
Os07t0657200-01	Rice	plastid	53.87	52.53
TraesCS2A01G132900.1	Wheat	cytosol	52.68	51.01
TraesCS2D01G135000.1	Wheat	cytosol	52.68	51.01
TraesCS2B01G156400.3	Wheat	golgi	52.78	50.97
Zm00001d007075_P007	Maize	plasma membrane	53.96	49.46
GSMUA_AchrUn_...	Banana	mitochondrion	36.12	49.19
Zm00001d011587_P001	Maize	nucleus	7.37	44.02
Zm00001d034411_P001	Maize	nucleus	6.82	43.6
Zm00001d037286_P001	Maize	nucleus	6.82	43.6
Zm00001d015774_P001	Maize	mitochondrion	7.19	39.9
Zm00001d051619_P001	Maize	peroxisome	2.46	35.06
Zm00001d019612_P001	Maize	plastid	14.92	34.45

Protein Annotations

Gene3D:1.20.940.10	Gene3D:1.25.40.1030	Gene3D:2.130.10.10	MapMan:22.4.1.2	InterPro:ACE1_Sec16_Sec31	EnsemblPlantsGene:Bra007747
EnsemblPlants:Bra007747.1	EnsemblPlants:Bra007747.1-P	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR001680
InterPro:IPR015943	InterPro:IPR017986	UniProt:M4CU53	PFAM:PF00400	PFAM:PF12931	ScanProsite:PS00678
PFscan:PS50082	PFscan:PS50294	PANTHER:PTHR13923	PANTHER:PTHR13923:SF11	SMART:SM00320	SUPFAM:SSF50978
UniParc:UPI0002542BB2	InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat	InterPro:WD40_repeat_CS	InterPro:WD40_repeat_dom	InterPro:WD40_repeat_dom_sf
SEG:seg	:	:	:	:	:

Description

AT3G63460 (E=0.0) | WD-40 repeat family protein

Coordinates

chrA09:-:30692386..30698446

Molecular Weight (calculated)

118563.0 Da

IEP (calculated)

4.833

GRAVY (calculated)

-0.275

Length

1099 amino acids

Sequence
(BLAST)

0001: MACIKGVGRS ASVALAPDAP YMAAGTMAGA VDLSFSSSAN LEIFKLDFQS DERELTLVGE IPSSERFHRL AWGKNGSGSE EFSLGLIAGG LVDGNIDLWN
0101: PLSLIGSESA LAGHLSVHKG PVRGLEFNAI APNLLASGAD DGEICIWDLT KPSEPSHFPL LKGSGSATQG EISFISWNRK VQQILASTSY NGTTAIWDLR
0201: KQKPIINFAD SVRRRCSVLQ WNPDIATQIM VASDDDSSPT LKLWDMRNTM SPVREFTGHQ KGVIAMEWCP SDSSYLLTCA KDNRTICWDT NTAEIVAELP
0301: AGNNWNFDVH WYPKIPGVIS ASSFDGKIGI YNIEGCSRYG AEENNLSTAC LRAPKWYKRP VGASFGFGGK LVSFHAKAPP KGASSIPSEV FLHSLATEQS
0401: LVSRTSEFEA AIENGDKTSL RGLCGKKSEE TESEEEKETW SLLKIMFEEE GTTRTKLISH LGFSLPSVEK DHAVDALSSD LNGIGLEDTA PEPVKINEAA
0501: AFAMDNGEDF FDNFPSKPDT PVSTSSKDFM PPDTDSSAKV EETQEIPEEE EEGSDKVFDD AIQSALVVGN YNEAVDQCIS ANKMADALVI AHVGGTSLWE
0601: STREKYLKTS GAPYMKIVSA MVNNDLTSLI YTRSLKFWKE TLALLCTFAQ GEQWASLCDA LASKLMAAGN TLAAVFCYIC AGNVDRTVEI WSRSLANDRD
0701: GRSYAELLQD LMEKTLVLAL ATGNKKFSAS LCKLFESYAE ILGSQGLLTT AMKYLKVLDS GGLSLELSIL RDRISLSAEP ETNAAASGTQ LQSTIPYNQE
0801: PTQAQPNVLS NPYDNQYQQP YTDSYVGGYV PSASHAPMQQ STMFMPHQAQ PAPQPSYPPA PASNAQPSMR TTFVPSTPPA LKNADQYQQP FVGFHSFTGP
0901: SNNAYPVPPA PNSYVPPGPS QVGQNLNPMM PQAVAPGAGA IGFTPMSAPG VAPRSVIGSV QPASPPMQQA TPAPAAPPPT VQTADTSNVP AHQKPVIATL
1001: TRLFNETSEA LGGARANPSK KREIEDNSRK LGALFVKLNS GDISKNAADK LAQLCHALDS HDFGAALQLQ VLLTTSEWDE CNFWLSTLKR MIKARQSVR

Best Arabidopsis Sequence Match ( AT3G63460.1 )
(BLAST)

0001: MACIKGVGRS ASVALAPDAP YMAAGTMAGA VDLSFSSSAN LEIFKLDFQS DDRDLPLVGE IPSSERFNRL AWGRNGSGSE EFALGLIAGG LVDGNIDLWN
0101: PLSLIGSQPS ENALVGHLSV HKGPVRGLEF NAISSNLLAS GADDGEICIW DLLKPSEPSH FPLLKGSGSA TQGEISFISW NRKVQQILAS TSYNGTTVIW
0201: DLRKQKPIIN FADSVRRRCS VLQWNPNVTT QIMVASDDDS SPTLKLWDMR NIMSPVREFT GHQRGVIAME WCPSDSSYLL TCAKDNRTIC WDTNTAEIVA
0301: ELPAGNNWNF DVHWYPKIPG VISASSFDGK IGIYNIEGCS RYGVEENNFG TAPLKAPKWY KRPVGASFGF GGKLVSCHAR APAKGTSSIL SEVFLHSLVT
0401: EQSLVSRTSE FEAAIENGDM TSLRGLCEKK SEETESEEEK ETWGLLKIMF EEEGTSRTKL ISHLGFTLPV AEKDQAVDGL SSDLNGIRLE DTAADALDLD
0501: DSNEAAAFAM DNGEDFFNNF PAKPDTPVST SAKDFMPSDT DFSTKGEETQ EMQEEEEESS DPVFDNAIQR ALIVGDYKEA VDQCITANKM ADALVIAHVG
0601: GTALWESTRE KYLKTSSAPY MKVVSAMVNN DLRSLIYTRS HKFWKETLAL LCTFAQGEQW TTLCDALASK LMAAGNTLAA VLCYICAGNV DRTVEIWSRS
0701: LANERDGRSY AELLQDLMEK TLVLALATGN KKFSASLCKL FESYAEILAS QGLLTTAMKY LKVLDSGGLS PELSILRDRI SLSAEPETNT TASGNTQPQS
0801: TMPYNQEPTQ AQPNVLANPY DNQYQQPYTD SYYVPQVSHP PMQQPTMFMP HQAQPAPQPS FTPAPTSNAQ PSMRTTFVPS TPPALKNADQ YQQPTMSSHS
0901: FTGPSNNAYP VPPGPGQYAP SGPSQLGQYP NPKMPQVVAP AAGPIGFTPM ATPGVAPRSV QPASPPTQQA AAQAAPAPAT PPPTVQTADT SNVPAHQKPV
1001: IATLTRLFNE TSEALGGARA NTTKKREIED NSRKLGALFV KLNSGDISKN AADKLAQLCQ ALDNNDFSTA LQIQVLLTTS EWDECNFWLA TLKRMMVKAR
1101: QNVR

Arabidopsis Description

SEC31BProtein transport protein SEC31 homolog B [Source:UniProtKB/Swiss-Prot;Acc:Q8L611]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.