Factsheet for Zm00001d037286_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

cytosol 1
mitochondrion 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d034411_P001	Maize	nucleus	98.84	98.84
Zm00001d011587_P001	Maize	nucleus	97.67	91.3
Zm00001d051619_P001	Maize	peroxisome	40.12	89.61
Zm00001d015774_P001	Maize	mitochondrion	70.35	61.11
Zm00001d019612_P001	Maize	plastid	96.51	34.87
Zm00001d007075_P007	Maize	plasma membrane	97.09	13.93
Zm00001d022378_P003	Maize	cytosol	89.53	13.58
CDY11476	Canola	plastid	43.6	11.49
GSMUA_AchrUn_...	Banana	mitochondrion	53.49	11.4
KRH23912	Soybean	cytosol	50.0	9.4
GSMUA_Achr8P22150_001	Banana	cytosol	53.49	8.15
VIT_13s0158g00140.t01	Wine grape	cytosol	50.0	7.83
KRH39898	Soybean	nucleus	50.0	7.49
CDX83811	Canola	cytosol	38.95	7.16
AT3G63460.1	Thale cress	cytosol	45.93	7.16
Solyc01g088020.2.1	Tomato	extracellular	46.51	7.12
GSMUA_Achr3P08600_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	44.77	7.07
CDX93907	Canola	cytosol	44.77	6.96
CDX79419	Canola	cytosol	44.19	6.88
Bra003525.1-P	Field mustard	cytosol	44.19	6.87
CDX67919	Canola	cytosol	44.19	6.86
CDX76700	Canola	cytosol	43.6	6.83
Bra007747.1-P	Field mustard	cytosol	43.6	6.82
Bra007745.1-P	Field mustard	cytosol	43.6	6.82
AT1G18830.1	Thale cress	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	38.37	6.81
Bra016539.1-P	Field mustard	cytosol	36.05	6.8
CDX96696	Canola	cytosol	36.05	6.63
GSMUA_AchrUn_...	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	1.74	1.49
GSMUA_AchrUn_...	Banana	extracellular	1.74	1.27
KRH15712	Soybean	mitochondrion, plastid	0.0	0.0
KRH23909	Soybean	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:Zm00001d037286_P001	EnsemblPlants:Zm00001d037286_T001	EnsemblPlantsGene:Zm00001d037286	Gene3D:1.25.40.1030	InterPro:ACE1_Sec16_Sec31	PANTHER:PTHR13923
PANTHER:PTHR13923:SF11	PFAM:PF12931	ProteinID:AQK83493.1	UniParc:UPI0008432D0B	UniProt:A0A1D6LW73	MapMan:22.4.1.2

Description

Protein transport protein SEC31 homolog B

Coordinates

chr6:-:119480539..119481390

Molecular Weight (calculated)

18403.1 Da

IEP (calculated)

3.987

GRAVY (calculated)

-0.252

Length

172 amino acids

Sequence
(BLAST)

001: MFEDDDFART KLLAHLGFEP PQAPPASSTD ELSQILADTL NIDHAAVTDN ADAQFLIDNG DDFFNNPQPS EASLAEESVS TNGQQIEQEV SGDAVPSDPS
101: IDKSIQHALV VGDYKGAVNQ CLASNHMADA LVIAHAGGSA LWESTRNHYL KNSISPYLKV VSAMVGNDLM SF

Best Arabidopsis Sequence Match ( AT3G63460.1 )
(BLAST)

0001: MACIKGVGRS ASVALAPDAP YMAAGTMAGA VDLSFSSSAN LEIFKLDFQS DDRDLPLVGE IPSSERFNRL AWGRNGSGSE EFALGLIAGG LVDGNIDLWN
0101: PLSLIGSQPS ENALVGHLSV HKGPVRGLEF NAISSNLLAS GADDGEICIW DLLKPSEPSH FPLLKGSGSA TQGEISFISW NRKVQQILAS TSYNGTTVIW
0201: DLRKQKPIIN FADSVRRRCS VLQWNPNVTT QIMVASDDDS SPTLKLWDMR NIMSPVREFT GHQRGVIAME WCPSDSSYLL TCAKDNRTIC WDTNTAEIVA
0301: ELPAGNNWNF DVHWYPKIPG VISASSFDGK IGIYNIEGCS RYGVEENNFG TAPLKAPKWY KRPVGASFGF GGKLVSCHAR APAKGTSSIL SEVFLHSLVT
0401: EQSLVSRTSE FEAAIENGDM TSLRGLCEKK SEETESEEEK ETWGLLKIMF EEEGTSRTKL ISHLGFTLPV AEKDQAVDGL SSDLNGIRLE DTAADALDLD
0501: DSNEAAAFAM DNGEDFFNNF PAKPDTPVST SAKDFMPSDT DFSTKGEETQ EMQEEEEESS DPVFDNAIQR ALIVGDYKEA VDQCITANKM ADALVIAHVG
0601: GTALWESTRE KYLKTSSAPY MKVVSAMVNN DLRSLIYTRS HKFWKETLAL LCTFAQGEQW TTLCDALASK LMAAGNTLAA VLCYICAGNV DRTVEIWSRS
0701: LANERDGRSY AELLQDLMEK TLVLALATGN KKFSASLCKL FESYAEILAS QGLLTTAMKY LKVLDSGGLS PELSILRDRI SLSAEPETNT TASGNTQPQS
0801: TMPYNQEPTQ AQPNVLANPY DNQYQQPYTD SYYVPQVSHP PMQQPTMFMP HQAQPAPQPS FTPAPTSNAQ PSMRTTFVPS TPPALKNADQ YQQPTMSSHS
0901: FTGPSNNAYP VPPGPGQYAP SGPSQLGQYP NPKMPQVVAP AAGPIGFTPM ATPGVAPRSV QPASPPTQQA AAQAAPAPAT PPPTVQTADT SNVPAHQKPV
1001: IATLTRLFNE TSEALGGARA NTTKKREIED NSRKLGALFV KLNSGDISKN AADKLAQLCQ ALDNNDFSTA LQIQVLLTTS EWDECNFWLA TLKRMMVKAR
1101: QNVR

Arabidopsis Description

SEC31BProtein transport protein SEC31 homolog B [Source:UniProtKB/Swiss-Prot;Acc:Q8L611]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.