Factsheet for Bra003525.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 2
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX67919	Canola	cytosol	99.73	99.55
Bra007745.1-P	Field mustard	cytosol	86.26	86.81
AT3G63460.1	Thale cress	cytosol	86.35	86.5
Bra007747.1-P	Field mustard	cytosol	85.9	86.44
KRH23909	Soybean	cytosol	12.66	77.35
VIT_13s0158g00140.t01	Wine grape	cytosol	63.83	64.24
Bra016539.1-P	Field mustard	cytosol	51.9	62.94
Solyc01g088020.2.1	Tomato	extracellular	62.93	61.92
KRH39898	Soybean	nucleus	63.83	61.5
GSMUA_AchrUn_...	Banana	extracellular	13.02	60.76
KRH23912	Soybean	cytosol	50.18	60.66
GSMUA_AchrUn_...	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	10.76	59.2
HORVU6Hr1G025750.1	Barley	cytosol	5.61	58.49
GSMUA_Achr3P08600_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	55.7	56.57
GSMUA_Achr8P22150_001	Banana	cytosol	55.61	54.47
KRH15712	Soybean	mitochondrion, plastid	8.59	53.98
KXG36842	Sorghum	plasma membrane	54.88	53.86
Zm00001d022378_P003	Maize	cytosol	54.79	53.44
Os07t0657200-01	Rice	plastid	54.43	53.42
TraesCS2D01G135000.1	Wheat	cytosol	52.71	51.37
TraesCS2A01G132900.1	Wheat	cytosol	52.62	51.28
TraesCS2B01G156400.3	Wheat	golgi	52.53	51.05
Zm00001d007075_P007	Maize	plasma membrane	54.16	49.96
GSMUA_AchrUn_...	Banana	mitochondrion	35.71	48.95
Zm00001d034411_P001	Maize	nucleus	6.87	44.19
Zm00001d037286_P001	Maize	nucleus	6.87	44.19
Zm00001d011587_P001	Maize	nucleus	7.32	44.02
Zm00001d015774_P001	Maize	mitochondrion	7.41	41.41
Zm00001d051619_P001	Maize	peroxisome	2.53	36.36
Zm00001d019612_P001	Maize	plastid	15.19	35.29

Protein Annotations

Gene3D:1.20.940.10	Gene3D:1.25.40.1030	Gene3D:2.130.10.10	MapMan:22.4.1.2	InterPro:ACE1_Sec16_Sec31	EnsemblPlantsGene:Bra003525
EnsemblPlants:Bra003525.1	EnsemblPlants:Bra003525.1-P	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR001680
InterPro:IPR015943	InterPro:IPR017986	UniProt:M4CH42	PFAM:PF00400	PFAM:PF12931	ScanProsite:PS00678
PFscan:PS50082	PFscan:PS50294	PANTHER:PTHR13923	PANTHER:PTHR13923:SF11	SMART:SM00320	SUPFAM:SSF50978
UniParc:UPI000254195D	InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat	InterPro:WD40_repeat_CS	InterPro:WD40_repeat_dom	InterPro:WD40_repeat_dom_sf
SEG:seg	:	:	:	:	:

Description

AT3G63460 (E=0.0) | WD-40 repeat family protein

Coordinates

chrA07:-:13615479..13621543

Molecular Weight (calculated)

119766.0 Da

IEP (calculated)

4.759

GRAVY (calculated)

-0.327

Length

1106 amino acids

Sequence
(BLAST)

0001: MACIKGVDRS ASVALAPDAP YMAAGTMAGA VDLSFSSSAS LEIFKLDFQS DDRDLPLVGE IPCSERFHRL AWGRNGSGSD EFSLGLIAGG LGDGNIDLWN
0101: PLSLTSPQSS VNALVGHLSV HKGPVRGLEF NAITPNLLAS GADDGEICIW DLTKPSEPSH FPLLKGSGSS TQGEISFISW NRKVQQILAS TSYNGTTVIW
0201: DLRKQKPLIN FADSVRRRCS VLQWNPDIAT QIMVASDDDS SPTLKLWDMR NTMSPVREFT GHQKGVIAME WCPSDSSYLL TCAKDNRTIC WDTNTGEIVA
0301: ELPAGNNWNF DVHWYPKIPG VISASSFDGK IGIYNIEGCS RYGAEDSTFG TAYLKAPKWY KRPVGASFGF GGKLVSFQSK APPKGASCIP SEVFLHSLVT
0401: EQSLVSRTSE FEAAIENGDK TSLRGLCEKK SEETESKEEK ETWGLLKMMF DEEGTTRTKL ISHLGFSLPS VEQDQTVNGL SSDLNGIELE DTAVHAREPE
0501: ESNEAAAFAM DNGEDFFNNF PAKPDTPVST SATDFIPPDT DFAAKEEETQ EMPEEEEDES SDRVFDDAIQ RALVVGDYKE AVDQCISANK MADALVIAHV
0601: GGTALWESTR EKYLKMSSAP FMKVVSAMVN NDLTSLVHTR SHKYWKETLA LLCTFAQGEQ WTSLCDVLAS KLMAAGNTLA AVLCYICAGN VDRTVEIWSR
0701: SLANERDGRS YAELLQDLME KTLVLALATD NKKFSASLCK LFESYAEILA SQGLLSTAMK YLKVLDSGGL SPELSILRDR ISLSAEPEPS TVASGNIQLQ
0801: STMPYTQEPT QAQPNVLSNP YDNQYQQPYT NSYGGYGPTA VNPPMQQATM FMPHQAQPTP QPSYPPAPAS NAQPSMRSTF VPSSLPALKN ANQYQQPTIA
0901: SHSFTGPSNN AYPVPPGPGS YVPSAPSQVG QYSNPMMSQV AAPGAGPIGF TPMPTPGVAP RSVIGSVQPA SPPAPQAAPA PAAPPPTVQT ADTSNVAAHQ
1001: KPVVATLTRL FNETSEALGG ARANPPKKRE IEDNSKKLGA LFVRLNSGEM GKSAADKLGQ LCQALDNHDF STALQIQVLL TNSEWDECNF WLSALKRMIK
1101: TRQNVR

Best Arabidopsis Sequence Match ( AT3G63460.1 )
(BLAST)

0001: MACIKGVGRS ASVALAPDAP YMAAGTMAGA VDLSFSSSAN LEIFKLDFQS DDRDLPLVGE IPSSERFNRL AWGRNGSGSE EFALGLIAGG LVDGNIDLWN
0101: PLSLIGSQPS ENALVGHLSV HKGPVRGLEF NAISSNLLAS GADDGEICIW DLLKPSEPSH FPLLKGSGSA TQGEISFISW NRKVQQILAS TSYNGTTVIW
0201: DLRKQKPIIN FADSVRRRCS VLQWNPNVTT QIMVASDDDS SPTLKLWDMR NIMSPVREFT GHQRGVIAME WCPSDSSYLL TCAKDNRTIC WDTNTAEIVA
0301: ELPAGNNWNF DVHWYPKIPG VISASSFDGK IGIYNIEGCS RYGVEENNFG TAPLKAPKWY KRPVGASFGF GGKLVSCHAR APAKGTSSIL SEVFLHSLVT
0401: EQSLVSRTSE FEAAIENGDM TSLRGLCEKK SEETESEEEK ETWGLLKIMF EEEGTSRTKL ISHLGFTLPV AEKDQAVDGL SSDLNGIRLE DTAADALDLD
0501: DSNEAAAFAM DNGEDFFNNF PAKPDTPVST SAKDFMPSDT DFSTKGEETQ EMQEEEEESS DPVFDNAIQR ALIVGDYKEA VDQCITANKM ADALVIAHVG
0601: GTALWESTRE KYLKTSSAPY MKVVSAMVNN DLRSLIYTRS HKFWKETLAL LCTFAQGEQW TTLCDALASK LMAAGNTLAA VLCYICAGNV DRTVEIWSRS
0701: LANERDGRSY AELLQDLMEK TLVLALATGN KKFSASLCKL FESYAEILAS QGLLTTAMKY LKVLDSGGLS PELSILRDRI SLSAEPETNT TASGNTQPQS
0801: TMPYNQEPTQ AQPNVLANPY DNQYQQPYTD SYYVPQVSHP PMQQPTMFMP HQAQPAPQPS FTPAPTSNAQ PSMRTTFVPS TPPALKNADQ YQQPTMSSHS
0901: FTGPSNNAYP VPPGPGQYAP SGPSQLGQYP NPKMPQVVAP AAGPIGFTPM ATPGVAPRSV QPASPPTQQA AAQAAPAPAT PPPTVQTADT SNVPAHQKPV
1001: IATLTRLFNE TSEALGGARA NTTKKREIED NSRKLGALFV KLNSGDISKN AADKLAQLCQ ALDNNDFSTA LQIQVLLTTS EWDECNFWLA TLKRMMVKAR
1101: QNVR

Arabidopsis Description

SEC31BProtein transport protein SEC31 homolog B [Source:UniProtKB/Swiss-Prot;Acc:Q8L611]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.