Factsheet for Zm00001d015774_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

cytosol 1
mitochondrion 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
MultiLoc:	cytosol
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	mitochondrion
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d051619_P001	Maize	peroxisome	34.34	88.31
Zm00001d011587_P001	Maize	nucleus	66.67	71.74
Zm00001d034411_P001	Maize	nucleus	61.62	70.93
Zm00001d037286_P001	Maize	nucleus	61.11	70.35
Zm00001d019612_P001	Maize	plastid	60.1	25.0
Zm00001d007075_P007	Maize	plasma membrane	71.72	11.84
Zm00001d022378_P003	Maize	cytosol	67.17	11.73
GSMUA_AchrUn_...	Banana	mitochondrion	44.44	10.9
CDY11476	Canola	plastid	35.35	10.72
KRH23912	Soybean	cytosol	42.42	9.18
VIT_13s0158g00140.t01	Wine grape	cytosol	44.95	8.1
GSMUA_Achr8P22150_001	Banana	cytosol	43.94	7.71
CDX79419	Canola	cytosol	41.41	7.42
Bra003525.1-P	Field mustard	cytosol	41.41	7.41
CDX67919	Canola	cytosol	41.41	7.4
Solyc01g088020.2.1	Tomato	extracellular	41.92	7.38
AT3G63460.1	Thale cress	cytosol	40.91	7.34
CDX93907	Canola	cytosol	40.91	7.32
KRH39898	Soybean	nucleus	42.42	7.32
CDX76700	Canola	cytosol	40.4	7.29
Bra007745.1-P	Field mustard	cytosol	39.9	7.19
Bra007747.1-P	Field mustard	cytosol	39.9	7.19
AT1G18830.1	Thale cress	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	34.34	7.02
CDX83811	Canola	cytosol	32.83	6.94
Bra016539.1-P	Field mustard	cytosol	30.81	6.69
GSMUA_Achr3P08600_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	36.36	6.61
CDX96696	Canola	cytosol	30.81	6.52
GSMUA_AchrUn_...	Banana	extracellular	2.53	2.11
KRH15712	Soybean	mitochondrion, plastid	1.52	1.7
GSMUA_AchrUn_...	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	1.01	1.0
KRH23909	Soybean	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:Zm00001d015774_P001	EnsemblPlants:Zm00001d015774_T001	EnsemblPlantsGene:Zm00001d015774	Gene3D:1.25.40.1030	PANTHER:PTHR13923	PANTHER:PTHR13923:SF11
ProteinID:AQK69518.1	SEG:seg	UniParc:UPI000842B850	UniProt:A0A1D6H3W4	MapMan:22.4.1.2	:

Description

Protein transport protein SEC31 homolog B

Coordinates

chr5:-:118261593..118262790

Molecular Weight (calculated)

21547.1 Da

IEP (calculated)

6.415

GRAVY (calculated)

-0.352

Length

198 amino acids

Sequence
(BLAST)

001: MATKVRYVLY VKKNHKNLLT DNADAQFLID NGDDFFNNPQ SSEASLAEES VSTNGQQIEQ EVSGDAVPSD PSIDKSIQHA LVVRDYKGAV NQCLASNRMA
101: DALVIAHAGG SALWENTRNH YLKNSISPYL KVVSAMVGND LMSFVSTWPL SSWKETHAHL WTYPLVSQHG RRLGVAPDHV VSSNTAGTVG AASPTDNH

Best Arabidopsis Sequence Match ( AT3G63460.1 )
(BLAST)

0001: MACIKGVGRS ASVALAPDAP YMAAGTMAGA VDLSFSSSAN LEIFKLDFQS DDRDLPLVGE IPSSERFNRL AWGRNGSGSE EFALGLIAGG LVDGNIDLWN
0101: PLSLIGSQPS ENALVGHLSV HKGPVRGLEF NAISSNLLAS GADDGEICIW DLLKPSEPSH FPLLKGSGSA TQGEISFISW NRKVQQILAS TSYNGTTVIW
0201: DLRKQKPIIN FADSVRRRCS VLQWNPNVTT QIMVASDDDS SPTLKLWDMR NIMSPVREFT GHQRGVIAME WCPSDSSYLL TCAKDNRTIC WDTNTAEIVA
0301: ELPAGNNWNF DVHWYPKIPG VISASSFDGK IGIYNIEGCS RYGVEENNFG TAPLKAPKWY KRPVGASFGF GGKLVSCHAR APAKGTSSIL SEVFLHSLVT
0401: EQSLVSRTSE FEAAIENGDM TSLRGLCEKK SEETESEEEK ETWGLLKIMF EEEGTSRTKL ISHLGFTLPV AEKDQAVDGL SSDLNGIRLE DTAADALDLD
0501: DSNEAAAFAM DNGEDFFNNF PAKPDTPVST SAKDFMPSDT DFSTKGEETQ EMQEEEEESS DPVFDNAIQR ALIVGDYKEA VDQCITANKM ADALVIAHVG
0601: GTALWESTRE KYLKTSSAPY MKVVSAMVNN DLRSLIYTRS HKFWKETLAL LCTFAQGEQW TTLCDALASK LMAAGNTLAA VLCYICAGNV DRTVEIWSRS
0701: LANERDGRSY AELLQDLMEK TLVLALATGN KKFSASLCKL FESYAEILAS QGLLTTAMKY LKVLDSGGLS PELSILRDRI SLSAEPETNT TASGNTQPQS
0801: TMPYNQEPTQ AQPNVLANPY DNQYQQPYTD SYYVPQVSHP PMQQPTMFMP HQAQPAPQPS FTPAPTSNAQ PSMRTTFVPS TPPALKNADQ YQQPTMSSHS
0901: FTGPSNNAYP VPPGPGQYAP SGPSQLGQYP NPKMPQVVAP AAGPIGFTPM ATPGVAPRSV QPASPPTQQA AAQAAPAPAT PPPTVQTADT SNVPAHQKPV
1001: IATLTRLFNE TSEALGGARA NTTKKREIED NSRKLGALFV KLNSGDISKN AADKLAQLCQ ALDNNDFSTA LQIQVLLTTS EWDECNFWLA TLKRMMVKAR
1101: QNVR

Arabidopsis Description

SEC31BProtein transport protein SEC31 homolog B [Source:UniProtKB/Swiss-Prot;Acc:Q8L611]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.