Factsheet for Zm00001d019612_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d034411_P001	Maize	nucleus	35.29	97.67
Zm00001d037286_P001	Maize	nucleus	34.87	96.51
Zm00001d011587_P001	Maize	nucleus	35.29	91.3
Zm00001d051619_P001	Maize	peroxisome	14.08	87.01
Zm00001d015774_P001	Maize	mitochondrion	25.0	60.1
CDY11476	Canola	plastid	34.24	24.96
Zm00001d022378_P003	Maize	cytosol	56.09	23.55
Zm00001d007075_P007	Maize	plasma membrane	59.24	23.52
KRH15712	Soybean	mitochondrion, plastid	7.14	19.32
GSMUA_AchrUn_...	Banana	mitochondrion	32.35	19.08
KRH23912	Soybean	cytosol	33.61	17.49
VIT_13s0158g00140.t01	Wine grape	cytosol	37.4	16.2
GSMUA_Achr8P22150_001	Banana	cytosol	38.03	16.03
KRH39898	Soybean	nucleus	37.18	15.42
CDX79419	Canola	cytosol	35.5	15.29
GSMUA_Achr3P08600_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	34.87	15.24
AT3G63460.1	Thale cress	cytosol	35.29	15.22
Bra003525.1-P	Field mustard	cytosol	35.29	15.19
CDX67919	Canola	cytosol	35.29	15.16
Bra016539.1-P	Field mustard	cytosol	28.99	15.13
CDX93907	Canola	cytosol	35.08	15.09
CDX83811	Canola	cytosol	29.62	15.06
CDX76700	Canola	cytosol	34.66	15.03
Bra007747.1-P	Field mustard	cytosol	34.45	14.92
Bra007745.1-P	Field mustard	cytosol	34.45	14.92
AT1G18830.1	Thale cress	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	30.25	14.86
Solyc01g088020.2.1	Tomato	extracellular	34.87	14.77
CDX96696	Canola	cytosol	28.99	14.76
GSMUA_AchrUn_...	Banana	extracellular	4.62	9.28
KRH23909	Soybean	cytosol	3.36	8.84
GSMUA_AchrUn_...	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	2.94	6.97

Protein Annotations

EnsemblPlants:Zm00001d019612_P001	EnsemblPlants:Zm00001d019612_T001	EnsemblPlantsGene:Zm00001d019612	Gene3D:1.25.40.1030	PANTHER:PTHR13923	PANTHER:PTHR13923:SF11
ProteinID:ONM53405.1	SEG:seg	UniParc:UPI0008430BFB	UniProt:A0A1D6HZ96	MapMan:22.4.1.2	:

Description

Protein transport protein SEC31 homolog B

Coordinates

chr7:+:46317214..46319746

Molecular Weight (calculated)

51517.9 Da

IEP (calculated)

6.825

GRAVY (calculated)

0.007

Length

476 amino acids

Sequence
(BLAST)

001: MAETPRPTPS LLSTCRSSPL LPAVSHRAPS ARLQRLLLFG ARSLCGILDA SRDRGPLLPA APPPSSPSSL PLHLTAPAPA PRRSHQTPTP PHSFLSPAAQ
101: ALVLAISSHL LPTLAAFLAS CRDEFLRADI MSLLKALELL GHWEWALALL RLKGSVLLIG MIVVKKFGLK GCTFLFQHPT EIKRQAVKSV NSQIRCVASL
201: LILILWCVTL YKIKWLKCPT GASFGFGGKL VSFHPVAPTQ GAQTSTSEVH VHNLVIEQSL VSRSTEFEAA IQNGDKSSLR ALCEKKSQES LSDEERETWG
301: FLRVMFEDGD FARTKLLAHL GFEPPQAPPA SSTDELSQIL ADTLNIDHAA VTDNADAQFL IDNGDDFFNN PQPLEASLAE ELVSTNGQHI EQEVSGDAVP
401: SDPSIDKSIQ HALVVGDYKG AVNQCLASNR MADALVIAHA GGSALWESTR NHYLKNSISP YLKVVSAMVD NDLMSF

Best Arabidopsis Sequence Match ( AT1G18830.2 )
(BLAST)

001: MDCIKSIGRS AFVAIAPESP FIAAGTMAGA VDLSFSSSAN LEIFELDFQS NDRELKLVGQ CQSSERFNRL AWGSYGSGSD GLIAGGLVDG NIGLWNPISS
101: ESGEIAHVRD LSKHKGPVRG LEFNVKSPNQ LASGADDGTV CIWDLANPSK PSHYLKGTGS YMQSEISSLS WNKGFQHVLA STSHNGTTVI WDVNNEKIIT
201: DLKTTVRCSV LQWDPDHFNQ ILVASDEDSS PNVKLLDIRY LQSPVRTFVG HQRGVIAMEW CPSDSLYLLT CGKDNRTICW NTKTGKIVAE LPTGQNWNFD
301: VHWYPKMPGV ISASSVDGKI GIYNLEGCSS YGTEVNNLYS DPLTAPKWWK RPAGASFGFG GKLISFNKNL PEASEVFLHS LATEKSLVNR ISKFEAALEN
401: GEKTSLRGLC EKKTEEAESE EEKETWGLLK IMLEEDGNAK TKLRSHLGFS LPSEENDQTA NEPHATCSST NVEETQKVPE PEGEEEESSD PTFDDAIQRS
501: LIVGDYKEAV AQCFSANKMA DALVIAHVGG TELWESTRDK YIRMSNAPYM KVVSAMMNND LMTYLHTRQP KSWKETLALI CTFAEGDEWI SLCDALASNL
601: MAAGFTLAAT LCYICAGNVD KTVDIWSMSL EKQSAGKSYA ECVQDLMEKT LVLALTTCNK RVSASLRKLF ESYAEILASQ GLIATAMKFL KLLESGDFSP
701: ELSILRDRIS LYAEPEAANT SASTNTQPKI SNPYQEKSFT PAPLSNAQPS RSITFFPLNP PRELKNADQY QQPTMDYHSF NRSAGPAYNA PPGPGSYRSI
801: HSQVGPYINS KIPQTVAPPV RPMTPTHQVA VQPEPVAPPP TVQTADTSNV PAHQKPIVAS LTRLFKETFE PLRGYSRDTP AKKREAEDNC SRKLGALFSK
901: LNNGDISKNA AEKLTQLCQA LDKRDFGAAL KIQGLMTSTE WDECSSWLPT LKKMIVTGRQ NVR

Arabidopsis Description

SEC31AProtein transport protein SEC31 homolog A [Source:UniProtKB/Swiss-Prot;Acc:F4ICD9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.